BLASTX nr result

ID: Cnidium21_contig00020292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020292
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285756.2| PREDICTED: F-box protein FBW2 [Vitis vinifera]    101   6e-20
emb|CAN62342.1| hypothetical protein VITISV_035646 [Vitis vinifera]   101   6e-20
emb|CBI19188.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1...    93   3e-17

>ref|XP_002285756.2| PREDICTED: F-box protein FBW2 [Vitis vinifera]
          Length = 296

 Score =  101 bits (252), Expect = 6e-20
 Identities = 58/121 (47%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
 Frame = -2

Query: 356 AIATTMTKLKHLELTYICLDTTSVLEIICNCPNLEFIDLRGCWDVKLDNKWLKDKFSKLT 177
           AIATTM KLKHLE+ Y  L T SVLEI+  CP LE +DLRGCW V+L+ K+LK+KF KL 
Sbjct: 181 AIATTMPKLKHLEMAYHLLSTKSVLEILSCCPELELLDLRGCWHVELNVKFLKEKFPKLR 240

Query: 176 VLGPHVVDHLERHCCWXXXXXXXXXXXXXXXXXXXEFDDDG---RLEIILYEGQGEDSDH 6
           VLGP VVD+     C                     +DD+G    LE+  YEG GE  ++
Sbjct: 241 VLGPVVVDY-----CRYYEMNECDDYSDYDESSDGTWDDEGGLEELEVRFYEGFGEHPEY 295

Query: 5   G 3
           G
Sbjct: 296 G 296


>emb|CAN62342.1| hypothetical protein VITISV_035646 [Vitis vinifera]
          Length = 225

 Score =  101 bits (252), Expect = 6e-20
 Identities = 58/121 (47%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
 Frame = -2

Query: 356 AIATTMTKLKHLELTYICLDTTSVLEIICNCPNLEFIDLRGCWDVKLDNKWLKDKFSKLT 177
           AIATTM KLKHLE+ Y  L T SVLEI+  CP LE +DLRGCW V+L+ K+LK+KF KL 
Sbjct: 105 AIATTMPKLKHLEMAYHLLSTKSVLEILSCCPELELLDLRGCWHVELNVKFLKEKFPKLR 164

Query: 176 VLGPHVVDHLERHCCWXXXXXXXXXXXXXXXXXXXEFDDDG---RLEIILYEGQGEDSDH 6
           VLGP VVD+     C                     +DD+G    LE+  YEG GE  ++
Sbjct: 165 VLGPVVVDY-----CRYYEMNECDDYSDYDESSDGTWDDEGGLEELEVRFYEGFGEHPEY 219

Query: 5   G 3
           G
Sbjct: 220 G 220


>emb|CBI19188.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/69 (66%), Positives = 54/69 (78%)
 Frame = -2

Query: 356 AIATTMTKLKHLELTYICLDTTSVLEIICNCPNLEFIDLRGCWDVKLDNKWLKDKFSKLT 177
           AIATTM KLKHLE+ Y  L T SVLEI+  CP LE +DLRGCW V+L+ K+LK+KF KL 
Sbjct: 181 AIATTMPKLKHLEMAYHLLSTKSVLEILSCCPELELLDLRGCWHVELNVKFLKEKFPKLR 240

Query: 176 VLGPHVVDH 150
           VLGP VVD+
Sbjct: 241 VLGPVVVDY 249


>ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|222842792|gb|EEE80339.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 43/68 (63%), Positives = 55/68 (80%)
 Frame = -2

Query: 356 AIATTMTKLKHLELTYICLDTTSVLEIICNCPNLEFIDLRGCWDVKLDNKWLKDKFSKLT 177
           AIATTM KLK LE+ Y  + T S+L+I+ +C NLEF+DLRGCW+V LDNK+ K+KF KLT
Sbjct: 182 AIATTMPKLKRLEMAYHLVSTESLLQILSSCTNLEFMDLRGCWNVNLDNKFFKEKFQKLT 241

Query: 176 VLGPHVVD 153
           VLGP V++
Sbjct: 242 VLGPLVME 249


>ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1 [Glycine max]
           gi|356508075|ref|XP_003522786.1| PREDICTED: F-box
           protein FBW2-like isoform 2 [Glycine max]
          Length = 321

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 43/71 (60%), Positives = 53/71 (74%)
 Frame = -2

Query: 356 AIATTMTKLKHLELTYICLDTTSVLEIICNCPNLEFIDLRGCWDVKLDNKWLKDKFSKLT 177
           AIA+TM KLKHLE+ Y  + T+ VL+I+ NCP LEF+D RGCW V LD+ +LK KF KL 
Sbjct: 182 AIASTMPKLKHLEMAYHLISTSGVLQILANCPKLEFLDQRGCWGVTLDHMFLKQKFPKLK 241

Query: 176 VLGPHVVDHLE 144
           VLGP V+D  E
Sbjct: 242 VLGPFVLDTYE 252


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