BLASTX nr result

ID: Cnidium21_contig00020266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020266
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isof...   159   3e-37
ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isof...   159   3e-37
emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera]   159   3e-37
ref|XP_002321813.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
ref|XP_002333234.1| predicted protein [Populus trichocarpa] gi|2...   157   8e-37

>ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isoform 1 [Vitis vinifera]
          Length = 167

 Score =  159 bits (401), Expect = 3e-37
 Identities = 73/85 (85%), Positives = 80/85 (94%)
 Frame = +3

Query: 9   GGNIIQPGATLFLKDLQRNGVDTEDEIYRVTYFGKGRMPGFGMDCKPRGQCTFGPRLQED 188
           GGNIIQPGATLFLKDLQRNGVDTE+EIYRVTY+GKGRMPGFG +C PRGQCTFG RLQE+
Sbjct: 83  GGNIIQPGATLFLKDLQRNGVDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFGARLQEE 142

Query: 189 EIRLLAEFVKSQAAEGWPNIEISGD 263
           EI+LLAEFVK QA +GWPN+EISGD
Sbjct: 143 EIKLLAEFVKLQADQGWPNLEISGD 167


>ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isoform 2 [Vitis vinifera]
           gi|297737964|emb|CBI27165.3| unnamed protein product
           [Vitis vinifera]
          Length = 173

 Score =  159 bits (401), Expect = 3e-37
 Identities = 73/85 (85%), Positives = 80/85 (94%)
 Frame = +3

Query: 9   GGNIIQPGATLFLKDLQRNGVDTEDEIYRVTYFGKGRMPGFGMDCKPRGQCTFGPRLQED 188
           GGNIIQPGATLFLKDLQRNGVDTE+EIYRVTY+GKGRMPGFG +C PRGQCTFG RLQE+
Sbjct: 89  GGNIIQPGATLFLKDLQRNGVDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFGARLQEE 148

Query: 189 EIRLLAEFVKSQAAEGWPNIEISGD 263
           EI+LLAEFVK QA +GWPN+EISGD
Sbjct: 149 EIKLLAEFVKLQADQGWPNLEISGD 173


>emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera]
          Length = 125

 Score =  159 bits (401), Expect = 3e-37
 Identities = 73/85 (85%), Positives = 80/85 (94%)
 Frame = +3

Query: 9   GGNIIQPGATLFLKDLQRNGVDTEDEIYRVTYFGKGRMPGFGMDCKPRGQCTFGPRLQED 188
           GGNIIQPGATLFLKDLQRNGVDTE+EIYRVTY+GKGRMPGFG +C PRGQCTFG RLQE+
Sbjct: 41  GGNIIQPGATLFLKDLQRNGVDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFGARLQEE 100

Query: 189 EIRLLAEFVKSQAAEGWPNIEISGD 263
           EI+LLAEFVK QA +GWPN+EISGD
Sbjct: 101 EIKLLAEFVKLQADQGWPNLEISGD 125


>ref|XP_002321813.1| predicted protein [Populus trichocarpa] gi|222868809|gb|EEF05940.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score =  158 bits (399), Expect = 5e-37
 Identities = 72/85 (84%), Positives = 79/85 (92%)
 Frame = +3

Query: 9   GGNIIQPGATLFLKDLQRNGVDTEDEIYRVTYFGKGRMPGFGMDCKPRGQCTFGPRLQED 188
           GGNIIQPGATLF KDLQRNGVDTE+EIYR+TYFGKGRMPGFG  C PRGQCTFGPRLQ++
Sbjct: 26  GGNIIQPGATLFTKDLQRNGVDTEEEIYRITYFGKGRMPGFGESCTPRGQCTFGPRLQDE 85

Query: 189 EIRLLAEFVKSQAAEGWPNIEISGD 263
           EI+LLA+FVKSQA +GWPNIEIS D
Sbjct: 86  EIKLLAQFVKSQADQGWPNIEISQD 110


>ref|XP_002333234.1| predicted protein [Populus trichocarpa] gi|222835556|gb|EEE73991.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  157 bits (397), Expect = 8e-37
 Identities = 72/85 (84%), Positives = 79/85 (92%)
 Frame = +3

Query: 9   GGNIIQPGATLFLKDLQRNGVDTEDEIYRVTYFGKGRMPGFGMDCKPRGQCTFGPRLQED 188
           GGNIIQPGATLF KDLQRNGVDTE+EIYR+TYFGKGRMPGFG  C PRGQCTFGPRLQ++
Sbjct: 75  GGNIIQPGATLFTKDLQRNGVDTEEEIYRMTYFGKGRMPGFGESCTPRGQCTFGPRLQDE 134

Query: 189 EIRLLAEFVKSQAAEGWPNIEISGD 263
           EI+LLA+FVKSQA +GWPNIEIS D
Sbjct: 135 EIKLLAQFVKSQADQGWPNIEISQD 159


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