BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020239
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    75   4e-12
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    74   9e-12
ref|XP_002532007.1| conserved hypothetical protein [Ricinus comm...    69   3e-10
ref|XP_002533006.1| RNA binding protein, putative [Ricinus commu...    69   3e-10
ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus c...    68   9e-10

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/117 (35%), Positives = 59/117 (50%)
 Frame = +1

Query: 4   RNKVVWKNHFQSPASTMNSVSTILFQWQQVQANHFYSVPLNQREGVVRWQRPITGWYTCN 183
           RN  VW    Q     +     +LFQWQ  + +    V  + ++  + WQ P  G+  CN
Sbjct: 10  RNDKVWDGQLQPSNIAVQLARELLFQWQAARNSATTQVQQSPQD-TIAWQPPAAGFLKCN 68

Query: 184 VDAAVFSEEIRSSFGCLIRD*RGNFVAGCGGNLWGIINPKVAEAMAFREALSWLKRL 354
           VDAA+FSE+ R   G  +RD RG F+        G   P+ AEA+  R+A+ WL +L
Sbjct: 69  VDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDAILWLGQL 125


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 45/122 (36%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
 Frame = +1

Query: 4   RNKVVWKNHFQSPASTMNSVSTILFQWQQVQANHFYSVPLNQREGVVRWQ-----RPITG 168
           RN  +W+   Q PA T+    + L  W         S+  N  E  V  +      P  G
Sbjct: 120 RNLCLWEGQLQQPAQTVFCALSFLCDWASA-----CSLQRNGNEARVMLEVLTCCPPQPG 174

Query: 169 WYTCNVDAAVFSEEIRSSFGCLIRD*RGNFVAGCGGNLWGIINPKVAEAMAFREALSWLK 348
           +  CNVD AVF+   RS FG +IRD  G+FV G  G+  G+ N K+AEA+  REA+ W+ 
Sbjct: 175 FVKCNVDGAVFTASGRSGFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREAVQWVL 234

Query: 349 RL 354
            L
Sbjct: 235 SL 236


>ref|XP_002532007.1| conserved hypothetical protein [Ricinus communis]
           gi|223528338|gb|EEF30380.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 273

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/118 (32%), Positives = 58/118 (49%)
 Frame = +1

Query: 1   HRNKVVWKNHFQSPASTMNSVSTILFQWQQVQANHFYSVPLNQREGVVRWQRPITGWYTC 180
           HR+ + W  H+Q                 Q + +   +VP +Q  G+  W  P+ GW  C
Sbjct: 82  HRDYLFWNKHWQLHIPPKGQSYLEQRCIAQKRNDVHQNVPAHQSSGI--WTCPVEGWLKC 139

Query: 181 NVDAAVFSEEIRSSFGCLIRD*RGNFVAGCGGNLWGIINPKVAEAMAFREALSWLKRL 354
           N+D  VF    R  FG + ++  G F A   G + G ++P+VAEA++ RE L W+K L
Sbjct: 140 NIDVVVFVANNRLGFGFIFQNDSGTFRAATNGLISGPLDPQVAEALSLREDLCWVKGL 197


>ref|XP_002533006.1| RNA binding protein, putative [Ricinus communis]
           gi|223527217|gb|EEF29381.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 197

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
 Frame = +1

Query: 1   HRNKVVWKNHFQSPASTMNSVSTILFQWQQVQANHFYSVPLNQ---REGVVRWQRPITGW 171
           HRN+VVW +  + P   ++   T L +W   Q  +  S P N       + +W++P TGW
Sbjct: 83  HRNEVVWYSKRKQPTQIVDGAVTYLHKWLIAQQTNPPS-PDNSGLFHHNLAKWKKPKTGW 141

Query: 172 YTCNVDAAVFSEEIRSSFGCLIRD*RGNFV-AGCGGNLWGIINPKVAEAMAFREAL 336
             CN+DAA+F+++      C++R+  G F+ A     +   +NPK+AE  +FRE +
Sbjct: 142 PKCNIDAAIFNQQGMIGADCVLRNTEGAFIGARINSFVQSDLNPKLAEDPSFREQI 197


>ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus communis]
           gi|223534693|gb|EEF36385.1| hypothetical protein
           RCOM_0596960 [Ricinus communis]
          Length = 270

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
 Frame = +1

Query: 1   HRNKVVWKNHFQSPASTMNSVSTILFQWQQVQANHFYSVPLNQ--REGVVRWQRPITGWY 174
           HRN+VVW +  + P   ++   T L +W   Q  +  S   N+     + +W++P +G  
Sbjct: 151 HRNEVVWNSKRKQPRQIVDGAVTYLQRWLIAQQTNPPSPDNNEVFNHNLAKWKKPKSGSL 210

Query: 175 TCNVDAAVFSEEIRSSFGCLIRD*RGNFV-AGCGGNLWGIINPKVAEAMAFREALSWLK 348
            CNVDA+ F+++     G ++R+  G  + A     +   +N K+AEA++FREALSW K
Sbjct: 211 KCNVDASTFNQQGMIGAGYVLRNTEGALLGARITSFVQSDLNLKLAEALSFREALSWTK 269