BLASTX nr result

ID: Cnidium21_contig00020228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020228
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABX75539.1| thioredoxin h-like protein [Panax ginseng]             164   1e-38
gb|ABX79345.1| thioredoxin h [Vitis vinifera] gi|161778792|gb|AB...   150   3e-34
ref|XP_002265334.1| PREDICTED: thioredoxin h [Vitis vinifera] gi...   149   6e-34
ref|XP_002518569.1| Thioredoxin H-type, putative [Ricinus commun...   148   1e-33
dbj|BAE16559.1| thioredoxin h [Codonopsis lanceolata]                 147   2e-33

>gb|ABX75539.1| thioredoxin h-like protein [Panax ginseng]
          Length = 128

 Score =  164 bits (416), Expect = 1e-38
 Identities = 80/118 (67%), Positives = 100/118 (84%), Gaps = 4/118 (3%)
 Frame = +1

Query: 250 EGQDQESRSKVIEVNSKETWDLYVSQATT-QGSPIVAHFTAAWCMVSVLMNPYLEEYAST 426
           EG+D +++SKV++V+SK++WD YV+QA T QG PIVAHFTAAWCM SV+MNPY+EE AST
Sbjct: 1   EGEDHQNKSKVVKVDSKDSWDFYVTQAATIQGCPIVAHFTAAWCMPSVMMNPYIEELAST 60

Query: 427 YPNILFLRVDVDDVKEVARKYGIKAMPTFMMIKEG---VEKKMIGANPDEIKKGIEAL 591
           + N+LFL VDVD+VKEVA KY IKAMPTF+M+K G   V+KK++GANPDEIKK I  L
Sbjct: 61  HQNVLFLTVDVDEVKEVAAKYEIKAMPTFLMMKGGGQLVDKKLVGANPDEIKKWIAGL 118


>gb|ABX79345.1| thioredoxin h [Vitis vinifera] gi|161778792|gb|ABX79347.1|
           thioredoxin h [Vitis vinifera]
           gi|307949523|gb|ADN96597.1| thioredoxin h [Vitis
           vinifera] gi|452114376|gb|AGG09345.1| thioredoxin h-type
           [Vitis vinifera]
          Length = 126

 Score =  150 bits (379), Expect = 3e-34
 Identities = 72/118 (61%), Positives = 96/118 (81%), Gaps = 2/118 (1%)
 Frame = +1

Query: 247 MEGQD-QESRSKVIEVNSKETWDLYVSQATTQGSPIVAHFTAAWCMVSVLMNPYLEEYAS 423
           ME Q+ +E++S+VI+V S+E+WD Y+SQATTQG P+V HFTAAWC+ SV MN + EE AS
Sbjct: 1   MENQEPEENKSRVIKVESEESWDFYISQATTQGCPVVVHFTAAWCIPSVAMNQFFEELAS 60

Query: 424 TYPNILFLRVDVDDVKEVARKYGIKAMPTFMMIKEGVE-KKMIGANPDEIKKGIEALV 594
            YP+ LFL VDVD+VK VA K  +KAMPTF+++KEG +  +++GANPDEI+K I+ALV
Sbjct: 61  NYPDALFLTVDVDEVKAVAVKMEVKAMPTFLLMKEGAQVDRLVGANPDEIRKRIDALV 118


>ref|XP_002265334.1| PREDICTED: thioredoxin h [Vitis vinifera]
           gi|297741860|emb|CBI33224.3| unnamed protein product
           [Vitis vinifera]
          Length = 126

 Score =  149 bits (376), Expect = 6e-34
 Identities = 72/118 (61%), Positives = 96/118 (81%), Gaps = 2/118 (1%)
 Frame = +1

Query: 247 MEGQD-QESRSKVIEVNSKETWDLYVSQATTQGSPIVAHFTAAWCMVSVLMNPYLEEYAS 423
           ME Q+ +E++S+VI+V S+E+WD Y+SQATTQG P+V HFTAAWC+ SV MN + EE AS
Sbjct: 1   MENQEPEENKSRVIKVVSEESWDFYISQATTQGCPVVVHFTAAWCIPSVAMNQFFEELAS 60

Query: 424 TYPNILFLRVDVDDVKEVARKYGIKAMPTFMMIKEGVE-KKMIGANPDEIKKGIEALV 594
            YP+ LFL VDVD+VK VA K  +KAMPTF+++KEG +  +++GANPDEI+K I+ALV
Sbjct: 61  NYPDALFLTVDVDEVKAVAVKMEVKAMPTFLLMKEGAQVDRLVGANPDEIRKRIDALV 118


>ref|XP_002518569.1| Thioredoxin H-type, putative [Ricinus communis]
           gi|223542414|gb|EEF43956.1| Thioredoxin H-type, putative
           [Ricinus communis]
          Length = 125

 Score =  148 bits (373), Expect = 1e-33
 Identities = 70/123 (56%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
 Frame = +1

Query: 247 MEGQDQESRSKVIEVNSKETWDLYVSQATTQGSPIVAHFTAAWCMVSVLMNPYLEEYAST 426
           ME QDQ+ +S+V++V+S E+WD YV+QAT QG PIV HFTA+WC+ S+ MNP+ EE AS 
Sbjct: 1   MESQDQQPKSRVVKVDSVESWDFYVTQATNQGCPIVVHFTASWCIPSLAMNPFFEEVASA 60

Query: 427 YPNILFLRVDVDDVKEVARKYGIKAMPTFMMIKEGVE-KKMIGANPDEIKKGIEALV*ST 603
            P+ LFL VDVDDVKEVA K  +KAMPTF+++K G +  K++GANP+EI+K I+  V S 
Sbjct: 61  NPDALFLTVDVDDVKEVAGKMEVKAMPTFVLMKNGAQVDKVVGANPEEIRKRIDGFVQSV 120

Query: 604 TTH 612
             +
Sbjct: 121 RVY 123


>dbj|BAE16559.1| thioredoxin h [Codonopsis lanceolata]
          Length = 124

 Score =  147 bits (372), Expect = 2e-33
 Identities = 72/112 (64%), Positives = 92/112 (82%), Gaps = 1/112 (0%)
 Frame = +1

Query: 262 QESRSKVIEVNSKETWDLYVSQATTQGSPIVAHFTAAWCMVSVLMNPYLEEYASTYPNIL 441
           Q S SKV++V+SK+TWD  V QA  Q SPIVAHFTA+WC+ SV+MNP+ EE ASTY + +
Sbjct: 5   QISISKVVKVDSKQTWDSLVIQAINQSSPIVAHFTASWCIPSVVMNPFFEELASTYKDTM 64

Query: 442 FLRVDVDDVKEVARKYGIKAMPTFMMIKEGVE-KKMIGANPDEIKKGIEALV 594
           FL VDVDDV+EVA KY +KAMPTF+++KEG +  K+IGANPDEI+K IE+L+
Sbjct: 65  FLLVDVDDVQEVASKYEVKAMPTFVLMKEGAQVDKLIGANPDEIRKRIESLI 116


Top