BLASTX nr result

ID: Cnidium21_contig00020205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020205
         (1060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511041.1| polyadenylate-binding protein, putative [Ric...   320   4e-85
ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-l...   316   5e-84
ref|XP_002511038.1| polyadenylate-binding protein, putative [Ric...   310   3e-82
ref|XP_002339510.1| predicted protein [Populus trichocarpa] gi|2...   310   5e-82
ref|XP_004166616.1| PREDICTED: polyadenylate-binding protein 2-l...   304   2e-80

>ref|XP_002511041.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223550156|gb|EEF51643.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 231

 Score =  320 bits (820), Expect = 4e-85
 Identities = 160/205 (78%), Positives = 177/205 (86%), Gaps = 12/205 (5%)
 Frame = +1

Query: 145 VYGADIPDETDMDADVDMSRLDEDENA------------SKELEDMKKRLKEIEEEAGAL 288
           VYG++IPDE +MDAD+DMS   E+E              SK+LEDMKKRLKEIEEEAGAL
Sbjct: 13  VYGSEIPDEGEMDADIDMSSRPEEEEEEVEEEYDEQNPNSKDLEDMKKRLKEIEEEAGAL 72

Query: 289 REMQAKVEKEMGAVQDSSSGTATLAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGTVN 468
           REMQAKVEKEMGAVQDSSSG+AT AEKEE D+RS+YVGNVDYACTPEEVQQHFQSCGTVN
Sbjct: 73  REMQAKVEKEMGAVQDSSSGSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVN 132

Query: 469 RVTILTDKFGQPKGFAYVEFVEAEAIQNAILLNESELHGRQLKVAAKRTNVPGMKQFRGR 648
           RVTILTDKFGQPKGFAYVEFVE +A+QNA+LLNESELHGRQLKV+AKRTN+PGMKQ+RGR
Sbjct: 133 RVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGR 192

Query: 649 PANPYFGFRSRRPYIPGPSMFPPYG 723
             NPY GFRSRRP++P P   PPYG
Sbjct: 193 RPNPYSGFRSRRPFMPAP-FSPPYG 216


>ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-like [Vitis vinifera]
          Length = 226

 Score =  316 bits (810), Expect = 5e-84
 Identities = 159/198 (80%), Positives = 176/198 (88%), Gaps = 5/198 (2%)
 Frame = +1

Query: 145 VYGADIPDETDMDAD---VDMSRLDEDENA--SKELEDMKKRLKEIEEEAGALREMQAKV 309
           VYG +IPDE +MDAD   VDM    ED++   SK +EDM+KRLKEIEEEAGALREMQAKV
Sbjct: 14  VYGGEIPDEGEMDADAEDVDMVSRPEDDSDPNSKNIEDMRKRLKEIEEEAGALREMQAKV 73

Query: 310 EKEMGAVQDSSSGTATLAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 489
           EKEMGAVQDSSS +AT AEKEE D+RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD
Sbjct: 74  EKEMGAVQDSSSASATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 133

Query: 490 KFGQPKGFAYVEFVEAEAIQNAILLNESELHGRQLKVAAKRTNVPGMKQFRGRPANPYFG 669
           KFGQPKGFAYVEFVE +A+QNA+LLNESELHGRQLKV+AKRTN+PGMKQ+RGR  NP FG
Sbjct: 134 KFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPNP-FG 192

Query: 670 FRSRRPYIPGPSMFPPYG 723
           FR RRP++PGPS +PPYG
Sbjct: 193 FRGRRPFMPGPSFYPPYG 210


>ref|XP_002511038.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223550153|gb|EEF51640.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 234

 Score =  310 bits (795), Expect = 3e-82
 Identities = 161/221 (72%), Positives = 177/221 (80%), Gaps = 28/221 (12%)
 Frame = +1

Query: 145 VYGADIPDETDMDADVDMSRLDEDENA------------SKELEDMKKRLKEIEEEAGAL 288
           VYG++IPDE +MDAD+DMS   E+E              SK+LEDMKKRLKEIEEEAGAL
Sbjct: 13  VYGSEIPDEGEMDADIDMSSRPEEEEEEVEEEYDEQNPNSKDLEDMKKRLKEIEEEAGAL 72

Query: 289 REMQAKVEKEMGAVQD----------------SSSGTATLAEKEEADARSIYVGNVDYAC 420
           REMQAKVEKEMGAVQ                 SSSG+AT AEKEE D+RSIYVGNVDYAC
Sbjct: 73  REMQAKVEKEMGAVQGISHSLPLSIYIVLWSYSSSGSATQAEKEEVDSRSIYVGNVDYAC 132

Query: 421 TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAIQNAILLNESELHGRQLKV 600
           TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE +A+QNA+LLNESELHGRQLKV
Sbjct: 133 TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKV 192

Query: 601 AAKRTNVPGMKQFRGRPANPYFGFRSRRPYIPGPSMFPPYG 723
           +AKRTN+PGMKQ+RGR  NPY GFRSRRP++P P  FPPYG
Sbjct: 193 SAKRTNIPGMKQYRGRRPNPYSGFRSRRPFMPAP-FFPPYG 232


>ref|XP_002339510.1| predicted protein [Populus trichocarpa] gi|222832586|gb|EEE71063.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  310 bits (793), Expect = 5e-82
 Identities = 160/197 (81%), Positives = 174/197 (88%), Gaps = 4/197 (2%)
 Frame = +1

Query: 145 VYGADIPDETDMDADVDMS-RLDEDENA---SKELEDMKKRLKEIEEEAGALREMQAKVE 312
           VYG +IPDE +MDADVDMS R +EDE     SK+LEDMKKRLKEIEEEAGALREMQAKVE
Sbjct: 16  VYGGEIPDEGEMDADVDMSSRAEEDEYQDPNSKDLEDMKKRLKEIEEEAGALREMQAKVE 75

Query: 313 KEMGAVQDSSSGTATLAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 492
           KEMGAVQDS   +AT AEKEE D+RSIYVGNVDY+CTPEEVQQHFQSCGTVNRVTILTDK
Sbjct: 76  KEMGAVQDSPGASATQAEKEEVDSRSIYVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDK 135

Query: 493 FGQPKGFAYVEFVEAEAIQNAILLNESELHGRQLKVAAKRTNVPGMKQFRGRPANPYFGF 672
           FGQPKGFAYVEFVE +AIQNA+LLNESELHGRQLKV+AKRTNVPGMKQFRGR  +PY G 
Sbjct: 136 FGQPKGFAYVEFVEVDAIQNALLLNESELHGRQLKVSAKRTNVPGMKQFRGRRPSPY-GL 194

Query: 673 RSRRPYIPGPSMFPPYG 723
           RSRRP++P P  +P YG
Sbjct: 195 RSRRPFMPAP-FYPAYG 210


>ref|XP_004166616.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
          Length = 229

 Score =  304 bits (779), Expect = 2e-80
 Identities = 158/202 (78%), Positives = 176/202 (87%), Gaps = 9/202 (4%)
 Frame = +1

Query: 145 VYGADIPDETDMDADVDMS--RLDED------ENA-SKELEDMKKRLKEIEEEAGALREM 297
           VYG DIPD+ ++DAD+DMS  R DE+       NA SK+LEDMK+RLKEIEEEAGALREM
Sbjct: 14  VYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREM 73

Query: 298 QAKVEKEMGAVQDSSSGTATLAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGTVNRVT 477
           QAKVEKEMGAVQDSSS +AT AEKEE D+RS+YVGNVDYACTPEEVQQHFQSCGTVNRVT
Sbjct: 74  QAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVT 133

Query: 478 ILTDKFGQPKGFAYVEFVEAEAIQNAILLNESELHGRQLKVAAKRTNVPGMKQFRGRPAN 657
           ILTDKFG PKGFAYVEFVE +A+QNA+LLNESELHGRQLKV+AKRTNVPGMKQ+RGR  N
Sbjct: 134 ILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPN 193

Query: 658 PYFGFRSRRPYIPGPSMFPPYG 723
           P FGFR RRP+IP  + +P YG
Sbjct: 194 P-FGFRGRRPFIP-TAPYPSYG 213


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