BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020201
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234256.1| polygalacturonase [Solanum lycopersicum] gi|...   108   4e-22
ref|XP_002281827.2| PREDICTED: probable polygalacturonase At1g80...   105   5e-21
emb|CBI36284.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002887842.1| hypothetical protein ARALYDRAFT_477239 [Arab...    96   3e-18
gb|AAD55489.1|AC009322_29 Similar to polygalacturonases [Arabido...    94   9e-18

>ref|NP_001234256.1| polygalacturonase [Solanum lycopersicum]
           gi|7381227|gb|AAF61444.1|AF138858_1 polygalacturonase
           [Solanum lycopersicum]
          Length = 452

 Score =  108 bits (270), Expect = 4e-22
 Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 2/122 (1%)
 Frame = -2

Query: 362 YSTSMLCSWIIYSAY--IFSNIVEGGLLEIQKLPLSGITNKPRSTLVLYVNEYGAKGDGF 189
           YS S+     +YS Y  + S  V G    +Q LP S  + + +S  +  VN++GA GDG 
Sbjct: 17  YSKSVALFLSLYSLYFLLISANVSGFESLLQLLPASA-SLRTKSESLFRVNDFGATGDGI 75

Query: 188 TDDTKALEDIWKIACXXXXXXKIVIPAQYSVLVRPIQFAGPCRSKVTIAILGSILAPKSP 9
           TDDTK+ +D+W +AC      KIVIPA YS LVR I FAGPCRSKV+I I G+ILAPK P
Sbjct: 76  TDDTKSFKDVWDMACSSPSHAKIVIPAGYSFLVRQINFAGPCRSKVSIRIAGTILAPKDP 135

Query: 8   DV 3
           DV
Sbjct: 136 DV 137


>ref|XP_002281827.2| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
           vinifera]
          Length = 452

 Score =  105 bits (261), Expect = 5e-21
 Identities = 54/119 (45%), Positives = 69/119 (57%)
 Frame = -2

Query: 359 STSMLCSWIIYSAYIFSNIVEGGLLEIQKLPLSGITNKPRSTLVLYVNEYGAKGDGFTDD 180
           S  ++C+  I+      N+   G   + +LP S        T +LYVN++GAKGDG  DD
Sbjct: 20  SLCLICTVFIFLVLFLINVE--GFEPLIQLPHSPAARPRLETKILYVNQFGAKGDGVQDD 77

Query: 179 TKALEDIWKIACXXXXXXKIVIPAQYSVLVRPIQFAGPCRSKVTIAILGSILAPKSPDV 3
           T A  + WKIAC       IVIP     LVRPI F GPCR+KVT+ I G+I+APK PDV
Sbjct: 78  TDAFRNAWKIACASITKASIVIPHDKKFLVRPISFGGPCRAKVTVTISGTIIAPKDPDV 136


>emb|CBI36284.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  105 bits (261), Expect = 5e-21
 Identities = 54/119 (45%), Positives = 69/119 (57%)
 Frame = -2

Query: 359 STSMLCSWIIYSAYIFSNIVEGGLLEIQKLPLSGITNKPRSTLVLYVNEYGAKGDGFTDD 180
           S  ++C+  I+      N+   G   + +LP S        T +LYVN++GAKGDG  DD
Sbjct: 9   SLCLICTVFIFLVLFLINVE--GFEPLIQLPHSPAARPRLETKILYVNQFGAKGDGVQDD 66

Query: 179 TKALEDIWKIACXXXXXXKIVIPAQYSVLVRPIQFAGPCRSKVTIAILGSILAPKSPDV 3
           T A  + WKIAC       IVIP     LVRPI F GPCR+KVT+ I G+I+APK PDV
Sbjct: 67  TDAFRNAWKIACASITKASIVIPHDKKFLVRPISFGGPCRAKVTVTISGTIIAPKDPDV 125


>ref|XP_002887842.1| hypothetical protein ARALYDRAFT_477239 [Arabidopsis lyrata subsp.
           lyrata] gi|297333683|gb|EFH64101.1| hypothetical protein
           ARALYDRAFT_477239 [Arabidopsis lyrata subsp. lyrata]
          Length = 444

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 40/83 (48%), Positives = 60/83 (72%)
 Frame = -2

Query: 254 TNKPRSTLVLYVNEYGAKGDGFTDDTKALEDIWKIACXXXXXXKIVIPAQYSVLVRPIQF 75
           + +PRS  +L+V ++GAKG+GFTDDTKA  D WK AC      +I++P  Y+ L+RPI  
Sbjct: 44  STRPRSERLLHVGKFGAKGNGFTDDTKAFADAWKTACSSKVKTRILVPENYTCLLRPIDL 103

Query: 74  AGPCRSKVTIAILGSILAPKSPD 6
           +GPC++++T+ I G+I+AP  PD
Sbjct: 104 SGPCKARLTLQISGTIIAPNDPD 126


>gb|AAD55489.1|AC009322_29 Similar to polygalacturonases [Arabidopsis thaliana]
          Length = 459

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 40/84 (47%), Positives = 59/84 (70%)
 Frame = -2

Query: 254 TNKPRSTLVLYVNEYGAKGDGFTDDTKALEDIWKIACXXXXXXKIVIPAQYSVLVRPIQF 75
           + +PRS  +L+V  +GAKG+G TDDTKA  D WK AC      +I++P  Y+ L+RPI  
Sbjct: 44  STRPRSERLLHVGNFGAKGNGVTDDTKAFADAWKTACSSKVKTRILVPENYTCLLRPIDL 103

Query: 74  AGPCRSKVTIAILGSILAPKSPDV 3
           +GPC++++T+ I G+I+AP  PDV
Sbjct: 104 SGPCKARLTLQISGTIIAPNDPDV 127