BLASTX nr result

ID: Cnidium21_contig00020186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020186
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534012.1| conserved hypothetical protein [Ricinus comm...    77   3e-28
dbj|BAJ34518.1| unnamed protein product [Thellungiella halophila]      77   8e-27
ref|NP_568570.1| homeobox protein 23 [Arabidopsis thaliana] gi|1...    77   3e-26
gb|AAM64462.1| unknown [Arabidopsis thaliana]                          77   3e-26
ref|XP_002870762.1| hypothetical protein ARALYDRAFT_494014 [Arab...    77   3e-26

>ref|XP_002534012.1| conserved hypothetical protein [Ricinus communis]
           gi|223525985|gb|EEF28370.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 335

 Score = 77.4 bits (189), Expect(2) = 3e-28
 Identities = 32/41 (78%), Positives = 34/41 (82%)
 Frame = +3

Query: 366 GHALDGCGEFMACPASNPIDPTSLRCAACGCHRNFHRRETE 488
           GHALDGCGEFM  P +   DPTSL+CAACGCHRNFHRRE E
Sbjct: 88  GHALDGCGEFMPSPTATHTDPTSLKCAACGCHRNFHRREPE 128



 Score = 73.6 bits (179), Expect(2) = 3e-28
 Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = +2

Query: 92  TNNSTTSIKTPEAESETPTRIQPPKPI-HTNGLLKRHHXXXXXXXXXXXXXXXVFGYRDC 268
           TN +T + K+P+ E+ETPTRIQPPKP+  TNG+LKRHH               V  Y++C
Sbjct: 19  TNTNTPTTKSPDQETETPTRIQPPKPLSFTNGVLKRHHHHHHHHHHLSAPPPVVITYKEC 78

Query: 269 LKNHAAHIG 295
           LKNHAA +G
Sbjct: 79  LKNHAATLG 87


>dbj|BAJ34518.1| unnamed protein product [Thellungiella halophila]
          Length = 320

 Score = 77.0 bits (188), Expect(2) = 8e-27
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = +3

Query: 366 GHALDGCGEFMACPASNPIDPTSLRCAACGCHRNFHRRETE 488
           GHALDGCGEFM  P+S   DPTSL+CAACGCHRNFHRRE +
Sbjct: 63  GHALDGCGEFMPSPSSISTDPTSLKCAACGCHRNFHRREPD 103



 Score = 68.9 bits (167), Expect(2) = 8e-27
 Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = +2

Query: 83  MDITNNSTTSIKTPEAESETPTRIQPPKPI-HTNGLLKRHHXXXXXXXXXXXXXXXVFGY 259
           M +T  +TT  K+PE ESETPTRIQP KPI  +NG++KRHH               +F Y
Sbjct: 3   MTLTTTTTTIPKSPEPESETPTRIQPAKPISFSNGIIKRHH------------HPLLFTY 50

Query: 260 RDCLKNHAAHIG 295
           ++CLKNHAA +G
Sbjct: 51  KECLKNHAAALG 62


>ref|NP_568570.1| homeobox protein 23 [Arabidopsis thaliana]
           gi|10177976|dbj|BAB11382.1| unnamed protein product
           [Arabidopsis thaliana] gi|20259470|gb|AAM13855.1|
           unknown protein [Arabidopsis thaliana]
           gi|21436443|gb|AAM51422.1| unknown protein [Arabidopsis
           thaliana] gi|332007089|gb|AED94472.1| homeobox protein
           23 [Arabidopsis thaliana]
          Length = 334

 Score = 77.0 bits (188), Expect(2) = 3e-26
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +3

Query: 366 GHALDGCGEFMACPASNPIDPTSLRCAACGCHRNFHRRETELNH 497
           GHALDGCGEFM  P+S   DPTSL+CAACGCHRNFHRR+ + N+
Sbjct: 69  GHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNN 112



 Score = 67.0 bits (162), Expect(2) = 3e-26
 Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = +2

Query: 89  ITNNSTTSIKTPEAESETPTRIQPPKPI-HTNGLLKRHHXXXXXXXXXXXXXXXVFGYRD 265
           IT  +T + K+PE ESETPTRIQP KPI  +NG++KRHH               +F Y++
Sbjct: 8   ITTTTTPTPKSPEPESETPTRIQPAKPISFSNGIIKRHH---------HHHHPLLFTYKE 58

Query: 266 CLKNHAAHIG 295
           CLKNHAA +G
Sbjct: 59  CLKNHAAALG 68


>gb|AAM64462.1| unknown [Arabidopsis thaliana]
          Length = 333

 Score = 77.0 bits (188), Expect(2) = 3e-26
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +3

Query: 366 GHALDGCGEFMACPASNPIDPTSLRCAACGCHRNFHRRETELNH 497
           GHALDGCGEFM  P+S   DPTSL+CAACGCHRNFHRR+ + N+
Sbjct: 68  GHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNN 111



 Score = 67.0 bits (162), Expect(2) = 3e-26
 Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = +2

Query: 89  ITNNSTTSIKTPEAESETPTRIQPPKPI-HTNGLLKRHHXXXXXXXXXXXXXXXVFGYRD 265
           IT  +T + K+PE ESETPTRIQP KPI  +NG++KRHH               +F Y++
Sbjct: 7   ITTTTTPTPKSPEPESETPTRIQPAKPISFSNGIIKRHH---------HHHHPLLFTYKE 57

Query: 266 CLKNHAAHIG 295
           CLKNHAA +G
Sbjct: 58  CLKNHAAALG 67


>ref|XP_002870762.1| hypothetical protein ARALYDRAFT_494014 [Arabidopsis lyrata subsp.
           lyrata] gi|297316598|gb|EFH47021.1| hypothetical protein
           ARALYDRAFT_494014 [Arabidopsis lyrata subsp. lyrata]
          Length = 327

 Score = 77.0 bits (188), Expect(2) = 3e-26
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +3

Query: 366 GHALDGCGEFMACPASNPIDPTSLRCAACGCHRNFHRRETELNH 497
           GHALDGCGEFM  P+S   DPTSL+CAACGCHRNFHRR+ + N+
Sbjct: 65  GHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNN 108



 Score = 67.0 bits (162), Expect(2) = 3e-26
 Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
 Frame = +2

Query: 83  MDIT---NNSTTSIKTPEAESETPTRIQPPKPI-HTNGLLKRHHXXXXXXXXXXXXXXXV 250
           MD+T     +TT+ K+PE ESETPTRIQP KPI  +NG++KRHH               +
Sbjct: 1   MDMTPTITTTTTTPKSPEPESETPTRIQPAKPISFSNGIIKRHH-----------HHPLL 49

Query: 251 FGYRDCLKNHAAHIG 295
           F Y++CLKNHAA +G
Sbjct: 50  FTYKECLKNHAAALG 64


Top