BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020178
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   117   7e-25
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   100   9e-20
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   100   2e-19
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    96   3e-18
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    94   1e-17

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  117 bits (294), Expect = 7e-25
 Identities = 52/130 (40%), Positives = 82/130 (63%)
 Frame = -1

Query: 400 WSSKRSTNFTSEVCKRREKMNKLMAVQPSEGVLAEIKSINGEIDELEGREEVYWAQRSRQ 221
           WS ++  +   E+   + +M  LM  +PSE  +  +++++  +DELE REEVYW QRSRQ
Sbjct: 292 WSKQKFGHVAKEIRMCQHQMKVLMESEPSEDNIMHMRALDARMDELEKREEVYWHQRSRQ 351

Query: 220 DWLKDGDKNTGFFHKKADQRRHRNTIRGVFDDGGNWKDDKEEAEAVFVMYFKALFTTNGA 41
           DW+K GDKNT FFH+KA  R  RN +R + ++ G W +D+++    F  YF+ LF +   
Sbjct: 352 DWIKSGDKNTKFFHQKASHREQRNNVRRIRNEAGEWFEDEDDVTECFAHYFENLFQSGNN 411

Query: 40  SDMNEVLDKV 11
            +M+ +L+ V
Sbjct: 412 CEMDPILNIV 421


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  100 bits (250), Expect = 9e-20
 Identities = 51/134 (38%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
 Frame = -1

Query: 406 QGWSSKRSTNFTSEVCKRREKMNKLMAVQPSEGVLAEIKSINGEIDELEGREEVYWAQRS 227
           QGWS K   +   ++    +K++       S         +  E+DEL  + E YW  RS
Sbjct: 286 QGWSKKTFGSLRKKIEAVEKKLHAAQGEATSIDSWERCVGLERELDELHAKNEAYWYLRS 345

Query: 226 RQDWLKDGDKNTGFFHKKADQRRHRNTIRGVFDDGGNWKDDKEEAEAVFVMYFKALFTTN 47
           R   +KDGD+NT +FH KA QR+ RN I G+FD GG W+ + EE E V   YF+ +FT++
Sbjct: 346 RVAEVKDGDRNTSYFHHKASQRKKRNLIHGIFDGGGRWQTEGEEIECVVERYFQEIFTSS 405

Query: 46  --GASDMNEVLDKV 11
              ++D  EVL  V
Sbjct: 406 EPSSNDFQEVLQHV 419


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 44/124 (35%), Positives = 73/124 (58%)
 Frame = -1

Query: 400 WSSKRSTNFTSEVCKRREKMNKLMAVQPSEGVLAEIKSINGEIDELEGREEVYWAQRSRQ 221
           WS+K+  N + ++    + ++       SE    E   +  ++DEL  + E YW  RSR 
Sbjct: 285 WSTKKFKNLSKQIETAEKALSVAQNNPISESACQECVLLEKKLDELHAKHEAYWYLRSRV 344

Query: 220 DWLKDGDKNTGFFHKKADQRRHRNTIRGVFDDGGNWKDDKEEAEAVFVMYFKALFTTNGA 41
             +KDGDKNT +FH KA QR+ RN ++G+FD  G W+++ +  E +F  YF ++FT++  
Sbjct: 345 AEVKDGDKNTKYFHHKASQRKKRNFVKGLFDGLGTWREEADHIENIFTSYFSSIFTSSNP 404

Query: 40  SDMN 29
           SD++
Sbjct: 405 SDLS 408


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/128 (35%), Positives = 70/128 (54%)
 Frame = -1

Query: 400 WSSKRSTNFTSEVCKRREKMNKLMAVQPSEGVLAEIKSINGEIDELEGREEVYWAQRSRQ 221
           W++K   N      +    +N L    P    L + + ++G++DE+   EE YW  R+R 
Sbjct: 286 WATKTFGNLKKRKKEALTLLNGLQQRDPDASTLEQCRIVSGDLDEIHRLEESYWHARARA 345

Query: 220 DWLKDGDKNTGFFHKKADQRRHRNTIRGVFDDGGNWKDDKEEAEAVFVMYFKALFTTNGA 41
           + ++DGDKNT +FH KA QR+ RNTI  + D+ G WK  +EE   V   YF+ LF T+  
Sbjct: 346 NEIRDGDKNTKYFHHKASQRKRRNTINELLDENGVWKKGREEICGVVQHYFEGLFATDSP 405

Query: 40  SDMNEVLD 17
            +M   L+
Sbjct: 406 VNMELALE 413


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/131 (37%), Positives = 74/131 (56%)
 Frame = -1

Query: 400  WSSKRSTNFTSEVCKRREKMNKLMAVQPSEGVLAEIKSINGEIDELEGREEVYWAQRSRQ 221
            WS ++ +N + +V      + KL    P +    +I  +  ++ +L  ++E+YW QRSR 
Sbjct: 893  WSKEKFSNPSVQVADLLSDIEKLHQSNPPDAH-HQINILTDQVTKLWTQDEMYWHQRSRV 951

Query: 220  DWLKDGDKNTGFFHKKADQRRHRNTIRGVFDDGGNWKDDKEEAEAVFVMYFKALFTTNGA 41
            +WLK GD+N+ FFH+   QRR  N I  + DD GNW D + +    F+ YF AL+ +NG 
Sbjct: 952  NWLKLGDQNSSFFHQTTIQRRQYNKIVRLKDDHGNWLDSEADVALQFLDYFTALYQSNGP 1011

Query: 40   SDMNEVLDKVD 8
                EVLD VD
Sbjct: 1012 QQWEEVLDFVD 1022