BLASTX nr result

ID: Cnidium21_contig00020144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020144
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79496.1|AC002328_4 F20N2.9 [Arabidopsis thaliana]                70   2e-10
ref|NP_001185242.1| FBD, F-box and leucine rich repeat domain-co...    70   2e-10
ref|NP_175962.1| FBD, F-box and leucine rich repeat domain-conta...    70   2e-10
ref|NP_849271.1| putative F-box/FBD/LRR-repeat protein [Arabidop...    69   4e-10
gb|AAF02795.1|AF195115_15 F5I10.18 gene product [Arabidopsis tha...    69   4e-10

>gb|AAF79496.1|AC002328_4 F20N2.9 [Arabidopsis thaliana]
          Length = 526

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/105 (45%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
 Frame = -2

Query: 362 NVKEINLTL-NFREL-YKLVPDVYMCTSIEVFRLKWKILVDVPENVSFCSLKVLQLTGVK 189
           NV+E++L L NF EL  KL   +  C SI + +LK +ILVDVP  V   SLK L L  V 
Sbjct: 192 NVRELSLKLFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVT 251

Query: 188 FSSYESVEKLLLSCPVLEDLVIENCKWLSGCCLSVCGSALKNFSL 54
           +S   S+ +LL +CPVLEDLV+E  K  +   LSV   +L+  +L
Sbjct: 252 YSDANSLHRLLSNCPVLEDLVMERDKIDNLGKLSVIVKSLQRLTL 296


>ref|NP_001185242.1| FBD, F-box and leucine rich repeat domain-containing protein
           [Arabidopsis thaliana]
           gi|122180328|sp|Q1PFK0.1|FBL32_ARATH RecName:
           Full=F-box/LRR-repeat protein At1g55660
           gi|91805971|gb|ABE65714.1| F-box family protein
           [Arabidopsis thaliana] gi|332195159|gb|AEE33280.1| FBD,
           F-box and leucine rich repeat domain-containing protein
           [Arabidopsis thaliana]
          Length = 364

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/105 (45%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
 Frame = -2

Query: 362 NVKEINLTL-NFREL-YKLVPDVYMCTSIEVFRLKWKILVDVPENVSFCSLKVLQLTGVK 189
           NV+E++L L NF EL  KL   +  C SI + +LK +ILVDVP  V   SLK L L  V 
Sbjct: 158 NVRELSLKLFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVT 217

Query: 188 FSSYESVEKLLLSCPVLEDLVIENCKWLSGCCLSVCGSALKNFSL 54
           +S   S+ +LL +CPVLEDLV+E  K  +   LSV   +L+  +L
Sbjct: 218 YSDANSLHRLLSNCPVLEDLVMERDKIDNLGKLSVIVKSLQRLTL 262


>ref|NP_175962.1| FBD, F-box and leucine rich repeat domain-containing protein
           [Arabidopsis thaliana] gi|332195158|gb|AEE33279.1| FBD,
           F-box and leucine rich repeat domain-containing protein
           [Arabidopsis thaliana]
          Length = 492

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/105 (45%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
 Frame = -2

Query: 362 NVKEINLTL-NFREL-YKLVPDVYMCTSIEVFRLKWKILVDVPENVSFCSLKVLQLTGVK 189
           NV+E++L L NF EL  KL   +  C SI + +LK +ILVDVP  V   SLK L L  V 
Sbjct: 158 NVRELSLKLFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVT 217

Query: 188 FSSYESVEKLLLSCPVLEDLVIENCKWLSGCCLSVCGSALKNFSL 54
           +S   S+ +LL +CPVLEDLV+E  K  +   LSV   +L+  +L
Sbjct: 218 YSDANSLHRLLSNCPVLEDLVMERDKIDNLGKLSVIVKSLQRLTL 262


>ref|NP_849271.1| putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|122214671|sp|Q3EAE5.1|FDL24_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At4g00315
           gi|332656456|gb|AEE81856.1| putative
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 441

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 46/105 (43%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
 Frame = -2

Query: 362 NVKEINLTL-NFREL-YKLVPDVYMCTSIEVFRLKWKILVDVPENVSFCSLKVLQLTGVK 189
           NV+E++L L  F E   KL   +Y C SI + +LK +ILVDVP  V   SLK L L  V 
Sbjct: 107 NVRELSLKLCTFAERPTKLPKSLYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVT 166

Query: 188 FSSYESVEKLLLSCPVLEDLVIENCKWLSGCCLSVCGSALKNFSL 54
           +S  +S+ +LL +CPVLEDLV+E  +  +   LSV   +L+  +L
Sbjct: 167 YSDEDSLHRLLSNCPVLEDLVVERDRIDNLGKLSVVVKSLQRLTL 211


>gb|AAF02795.1|AF195115_15 F5I10.18 gene product [Arabidopsis thaliana]
           gi|2252838|gb|AAB62837.1| A_IG005I10.18 gene product
           [Arabidopsis thaliana] gi|7267119|emb|CAB80790.1|
           AT4g00320 [Arabidopsis thaliana]
          Length = 773

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 46/105 (43%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
 Frame = -2

Query: 362 NVKEINLTL-NFREL-YKLVPDVYMCTSIEVFRLKWKILVDVPENVSFCSLKVLQLTGVK 189
           NV+E++L L  F E   KL   +Y C SI + +LK +ILVDVP  V   SLK L L  V 
Sbjct: 107 NVRELSLKLCTFAERPTKLPKSLYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVT 166

Query: 188 FSSYESVEKLLLSCPVLEDLVIENCKWLSGCCLSVCGSALKNFSL 54
           +S  +S+ +LL +CPVLEDLV+E  +  +   LSV   +L+  +L
Sbjct: 167 YSDEDSLHRLLSNCPVLEDLVVERDRIDNLGKLSVVVKSLQRLTL 211


Top