BLASTX nr result

ID: Cnidium21_contig00020139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020139
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004935590.1| ribosomal protein L16 (chloroplast) [Eleuthe...   200   3e-49
ref|YP_740155.1| ribosomal protein L16 [Daucus carota] gi|122221...   200   4e-49
ref|YP_087003.1| ribosomal protein L16 [Panax ginseng] gi|752541...   199   6e-49
gb|ABU85174.1| ribosomal protein L16 [Anethum graveolens]             199   6e-49
gb|ADD30322.1| ribosomal protein L16 [Ilex cornuta]                   199   8e-49

>ref|YP_004935590.1| ribosomal protein L16 (chloroplast) [Eleutherococcus senticosus]
           gi|347448245|gb|AEO92657.1| ribosomal protein L16
           (chloroplast) [Eleutherococcus senticosus]
          Length = 135

 Score =  200 bits (509), Expect = 3e-49
 Identities = 94/132 (71%), Positives = 115/132 (87%)
 Frame = -3

Query: 671 APLRSKFAKHHKGRMGGISHQGNHISFGNYALQALDHSWITSRQLEAGRKVLIQNARRTG 492
           +P R++F K H+GRM GIS++GNHISFG YALQAL+ +WITSRQ+EAGR+ + +NARR G
Sbjct: 3   SPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGG 62

Query: 491 KIWVRIFPYKPVTVRPTETRMGRGKGACAFWVGVVQPGRIIYEIGGVTERMAREAISIAS 312
           KIWVRIFP KPVTVRP ETRMG GKG+  +WV VV+PGRI+YE+GGVTE +AR+AISIAS
Sbjct: 63  KIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARKAISIAS 122

Query: 311 SKMPVRTKFISL 276
           SKMP+RT+FI L
Sbjct: 123 SKMPIRTQFIIL 134


>ref|YP_740155.1| ribosomal protein L16 [Daucus carota]
           gi|122221302|sp|Q0G9S4.1|RK16_DAUCA RecName: Full=50S
           ribosomal protein L16, chloroplastic
           gi|113200945|gb|ABI32461.1| ribosomal protein L16
           [Daucus carota]
          Length = 135

 Score =  200 bits (508), Expect = 4e-49
 Identities = 94/133 (70%), Positives = 114/133 (85%)
 Frame = -3

Query: 671 APLRSKFAKHHKGRMGGISHQGNHISFGNYALQALDHSWITSRQLEAGRKVLIQNARRTG 492
           +P R++F K H+GRM GIS++GNHISFG YALQAL+ +WITSRQ+EAGR+ + +NARR G
Sbjct: 3   SPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGG 62

Query: 491 KIWVRIFPYKPVTVRPTETRMGRGKGACAFWVGVVQPGRIIYEIGGVTERMAREAISIAS 312
           KIWVRIFP KPVTVRP ETRMG GKG+  +WV VV+PGRI+YE+GGVTE +AR AISIAS
Sbjct: 63  KIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISIAS 122

Query: 311 SKMPVRTKFISLG 273
           SKMP+RT+FI  G
Sbjct: 123 SKMPIRTQFIISG 135


>ref|YP_087003.1| ribosomal protein L16 [Panax ginseng]
           gi|75254102|sp|Q68RW9.1|RK16_PANGI RecName: Full=50S
           ribosomal protein L16, chloroplastic
           gi|51235350|gb|AAT98546.1| ribosomal protein L16 [Panax
           ginseng]
          Length = 135

 Score =  199 bits (507), Expect = 6e-49
 Identities = 93/130 (71%), Positives = 114/130 (87%)
 Frame = -3

Query: 671 APLRSKFAKHHKGRMGGISHQGNHISFGNYALQALDHSWITSRQLEAGRKVLIQNARRTG 492
           +P R++F K H+GRM GIS++GNHISFG YALQAL+ +WITSRQ+EAGR+ + +NARR G
Sbjct: 3   SPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGG 62

Query: 491 KIWVRIFPYKPVTVRPTETRMGRGKGACAFWVGVVQPGRIIYEIGGVTERMAREAISIAS 312
           KIWVRIFP KPVTVRP ETRMG GKG+  +WV VV+PGRI+YE+GGVTE +AR+AISIAS
Sbjct: 63  KIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARKAISIAS 122

Query: 311 SKMPVRTKFI 282
           SKMP+RT+FI
Sbjct: 123 SKMPIRTQFI 132


>gb|ABU85174.1| ribosomal protein L16 [Anethum graveolens]
          Length = 136

 Score =  199 bits (507), Expect = 6e-49
 Identities = 94/132 (71%), Positives = 113/132 (85%)
 Frame = -3

Query: 668 PLRSKFAKHHKGRMGGISHQGNHISFGNYALQALDHSWITSRQLEAGRKVLIQNARRTGK 489
           P R++F K H+GRM GIS++GNHISFG YALQAL+ +WITSRQ+EAGR+ + +NARR GK
Sbjct: 5   PKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGK 64

Query: 488 IWVRIFPYKPVTVRPTETRMGRGKGACAFWVGVVQPGRIIYEIGGVTERMAREAISIASS 309
           IWVRIFP KPVTVRP ETRMG GKG+  +WV VV+PGRI+YE+GGVTE +AR AISIASS
Sbjct: 65  IWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISIASS 124

Query: 308 KMPVRTKFISLG 273
           KMP+RT+FI  G
Sbjct: 125 KMPIRTQFIISG 136


>gb|ADD30322.1| ribosomal protein L16 [Ilex cornuta]
          Length = 135

 Score =  199 bits (506), Expect = 8e-49
 Identities = 93/133 (69%), Positives = 115/133 (86%)
 Frame = -3

Query: 671 APLRSKFAKHHKGRMGGISHQGNHISFGNYALQALDHSWITSRQLEAGRKVLIQNARRTG 492
           +P R++F K H+GRM GIS++GNHI FG YALQAL+ +WITSRQ+EAGR+ + +NARR G
Sbjct: 3   SPKRTRFRKQHRGRMKGISYRGNHICFGKYALQALEPAWITSRQIEAGRRAMTRNARRGG 62

Query: 491 KIWVRIFPYKPVTVRPTETRMGRGKGACAFWVGVVQPGRIIYEIGGVTERMAREAISIAS 312
           KIWVRIFP KPVTVRPTETRMG GKG+  +WV VV+PGRI+YE+GGVTE +AR+AISIA+
Sbjct: 63  KIWVRIFPDKPVTVRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARKAISIAA 122

Query: 311 SKMPVRTKFISLG 273
           SKMP+RT+FI  G
Sbjct: 123 SKMPIRTQFIISG 135


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