BLASTX nr result

ID: Cnidium21_contig00020135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020135
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001077459.1| HIT-type Zinc finger family protein [Arabido...   125   3e-27
ref|NP_001077460.1| HIT-type Zinc finger family protein [Arabido...   125   3e-27
ref|NP_001184910.1| HIT-type Zinc finger family protein [Arabido...   124   1e-26
ref|XP_002889529.1| hypothetical protein ARALYDRAFT_470480 [Arab...   118   4e-25
emb|CBI32194.3| unnamed protein product [Vitis vinifera]              117   7e-25

>ref|NP_001077459.1| HIT-type Zinc finger family protein [Arabidopsis thaliana]
           gi|332189641|gb|AEE27762.1| HIT-type Zinc finger family
           protein [Arabidopsis thaliana]
          Length = 367

 Score =  125 bits (315), Expect = 3e-27
 Identities = 52/66 (78%), Positives = 61/66 (92%)
 Frame = +2

Query: 83  KDTICEECKENPSKYKCPGCSIRSCSLPCVKAHKQSTGCTGKKPLTKIIPLSKFDDNLLI 262
           KD++CEECK+NP KYKCPGCSIRSC+LPCVKAHKQ TGCTGK+  T ++PLSKFDDNLL+
Sbjct: 2   KDSVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTDVVPLSKFDDNLLL 61

Query: 263 SDYNLL 280
           SDYN+L
Sbjct: 62  SDYNML 67


>ref|NP_001077460.1| HIT-type Zinc finger family protein [Arabidopsis thaliana]
           gi|110743023|dbj|BAE99404.1| hypothetical protein
           [Arabidopsis thaliana] gi|332189642|gb|AEE27763.1|
           HIT-type Zinc finger family protein [Arabidopsis
           thaliana]
          Length = 392

 Score =  125 bits (315), Expect = 3e-27
 Identities = 52/66 (78%), Positives = 61/66 (92%)
 Frame = +2

Query: 83  KDTICEECKENPSKYKCPGCSIRSCSLPCVKAHKQSTGCTGKKPLTKIIPLSKFDDNLLI 262
           KD++CEECK+NP KYKCPGCSIRSC+LPCVKAHKQ TGCTGK+  T ++PLSKFDDNLL+
Sbjct: 2   KDSVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTDVVPLSKFDDNLLL 61

Query: 263 SDYNLL 280
           SDYN+L
Sbjct: 62  SDYNML 67


>ref|NP_001184910.1| HIT-type Zinc finger family protein [Arabidopsis thaliana]
           gi|332189643|gb|AEE27764.1| HIT-type Zinc finger family
           protein [Arabidopsis thaliana]
          Length = 644

 Score =  124 bits (310), Expect = 1e-26
 Identities = 51/65 (78%), Positives = 60/65 (92%)
 Frame = +2

Query: 86  DTICEECKENPSKYKCPGCSIRSCSLPCVKAHKQSTGCTGKKPLTKIIPLSKFDDNLLIS 265
           D++CEECK+NP KYKCPGCSIRSC+LPCVKAHKQ TGCTGK+  T ++PLSKFDDNLL+S
Sbjct: 255 DSVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTDVVPLSKFDDNLLLS 314

Query: 266 DYNLL 280
           DYN+L
Sbjct: 315 DYNML 319


>ref|XP_002889529.1| hypothetical protein ARALYDRAFT_470480 [Arabidopsis lyrata subsp.
           lyrata] gi|297335371|gb|EFH65788.1| hypothetical protein
           ARALYDRAFT_470480 [Arabidopsis lyrata subsp. lyrata]
          Length = 392

 Score =  118 bits (296), Expect = 4e-25
 Identities = 51/66 (77%), Positives = 58/66 (87%)
 Frame = +2

Query: 83  KDTICEECKENPSKYKCPGCSIRSCSLPCVKAHKQSTGCTGKKPLTKIIPLSKFDDNLLI 262
           K+++CEECK NP KYKCPGCSIRSC LPCVKAHKQ TGCTGKK L  ++PLSKFDDNLL+
Sbjct: 2   KNSVCEECKLNPWKYKCPGCSIRSCGLPCVKAHKQRTGCTGKKNLINVVPLSKFDDNLLL 61

Query: 263 SDYNLL 280
           SDY +L
Sbjct: 62  SDYIML 67


>emb|CBI32194.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  117 bits (294), Expect = 7e-25
 Identities = 50/74 (67%), Positives = 60/74 (81%)
 Frame = +2

Query: 59  ESSNPKSKKDTICEECKENPSKYKCPGCSIRSCSLPCVKAHKQSTGCTGKKPLTKIIPLS 238
           E +    +   +C+ECK NPSKY CPGCS+RSCSLPCVKAHKQ TGCTGK+  T+ +PLS
Sbjct: 3   EQTAQNPRHPPLCQECKLNPSKYTCPGCSVRSCSLPCVKAHKQQTGCTGKRQQTQFVPLS 62

Query: 239 KFDDNLLISDYNLL 280
           +FDDNLL+SDYNLL
Sbjct: 63  QFDDNLLLSDYNLL 76


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