BLASTX nr result

ID: Cnidium21_contig00020134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020134
         (1780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265717.1| PREDICTED: box C/D snoRNA protein 1 [Vitis v...   275   7e-78
ref|XP_002330887.1| predicted protein [Populus trichocarpa] gi|2...   263   1e-75
emb|CBI32194.3| unnamed protein product [Vitis vinifera]              278   3e-72
ref|XP_002269272.1| PREDICTED: box C/D snoRNA protein 1 [Vitis v...   278   3e-72
ref|XP_002512150.1| conserved hypothetical protein [Ricinus comm...   268   3e-69

>ref|XP_002265717.1| PREDICTED: box C/D snoRNA protein 1 [Vitis vinifera]
          Length = 385

 Score =  275 bits (703), Expect(2) = 7e-78
 Identities = 140/250 (56%), Positives = 179/250 (71%), Gaps = 5/250 (2%)
 Frame = -1

Query: 1780 LEDVKRVADSAQRKRAKLCGDSQHRLP--LKYLGNAAANRRTKIIFLPTGMSKRQTNQSF 1607
            LE+VK VA+SAQR+R KLCG SQ + P  L+ L NAA +RRTK++FLP+GMSKR+ N+S 
Sbjct: 76   LEEVKSVAESAQRRRVKLCGYSQLKFPYHLRGLRNAAGSRRTKLLFLPSGMSKREKNKSQ 135

Query: 1606 YDHRKKVISWTIEWRFHSTDVVLHDHGVDENTSLSSVIMNHLQPGPWNHRLKRFCEEPLQ 1427
            Y+ R K I+WTIEWRFHSTDVVL DHG++EN++ SSVI  HL+PGPWNH+LK FC E L 
Sbjct: 136  YNQRSKCITWTIEWRFHSTDVVLLDHGINENSTFSSVIEKHLKPGPWNHKLKPFCAEQLD 195

Query: 1426 SLKLFVRKFAKGSKSPFLELDIDAPMRKQLANLVIIEYPVIHVFLPSHHYDFEVIKAA-- 1253
             LK F+RK+ KG +SPF ELDI AP+R+Q ANLVI+EYP IHVFLPSH YDF+  K A  
Sbjct: 196  CLKFFIRKYPKGPRSPFHELDISAPIRQQFANLVILEYPQIHVFLPSHSYDFDATKDANP 255

Query: 1252 IRQKPDPKKSIGNQEQSPKGVPFREEEIKDE-NSPDPKVLDLMNYGKQNGIDKISHQPTG 1076
              ++ + K+S+     SPKG+ FREEEI++   S D +VLDLM + K    +K    P  
Sbjct: 256  CHRRAELKESLTIDHPSPKGISFREEEIEEHGGSLDSQVLDLMQHVKSTQANKPQSSPQK 315

Query: 1075 TEEQVTVKLE 1046
             E    +  +
Sbjct: 316  KEPSENIDFD 325



 Score = 44.3 bits (103), Expect(2) = 7e-78
 Identities = 19/38 (50%), Positives = 28/38 (73%)
 Frame = -3

Query: 935 EKIDFEFEQGLIDSYSDLISESNLDEVFDLDEVFKQEL 822
           E IDF+FEQGL+D YSD+I++ N D+  D +  F +E+
Sbjct: 320 ENIDFDFEQGLLDVYSDIIAQINPDDFLDWEGDFSKEV 357


>ref|XP_002330887.1| predicted protein [Populus trichocarpa] gi|222872709|gb|EEF09840.1|
            predicted protein [Populus trichocarpa]
          Length = 424

 Score =  263 bits (673), Expect(2) = 1e-75
 Identities = 139/242 (57%), Positives = 173/242 (71%), Gaps = 11/242 (4%)
 Frame = -1

Query: 1780 LEDVKRVADSAQRKRAKLCGDSQ------HRLPLKYLGNAAANRRTKIIFLPTGMSKRQT 1619
            LE++KRVADSA+R R KL           HR  LK    AAA RRTK++FLP+GMSKR+ 
Sbjct: 86   LEEIKRVADSARRTRTKLHPHPPYSRFPPHRQDLK---RAAARRRTKLLFLPSGMSKREK 142

Query: 1618 NQSFYDHRKKVISWTIEWRFHSTDVVLHDHGVDENTSLSSVIMNHLQPGPWNHRLKRFCE 1439
            NQ+ YD RKK ISWTIEWRFHSTDVVLHDHGV E+T L SVI  HL+PGPWNH L++FC+
Sbjct: 143  NQTQYDPRKKSISWTIEWRFHSTDVVLHDHGVHEDTELFSVIEKHLKPGPWNHPLRQFCD 202

Query: 1438 EPLQSLKLFVRKFAKGSKSPFLELDIDAPMRKQLANLVIIEYPVIHVFLPSHHYDFEVIK 1259
            +PL SLK F+RK+ KG KS F E++  A +R+QLAN+VI+E+PVIHVFLPSH YDF+V+K
Sbjct: 203  QPLDSLKFFIRKYPKGPKSTFCEINTKASLRQQLANVVIMEHPVIHVFLPSHKYDFDVVK 262

Query: 1258 --AAIRQKPDPKKSIGNQEQSPKGVPFREEEIKDEN---SPDPKVLDLMNYGKQNGIDKI 1094
                +  + D K S  N   SPKG+ FREE+I+DE    S DP+V DLM     +  ++I
Sbjct: 263  DVRLVNHRLDAKNSASNDCPSPKGIVFREEQIEDEANICSFDPQVYDLMKNEILSPSNQI 322

Query: 1093 SH 1088
             H
Sbjct: 323  CH 324



 Score = 48.1 bits (113), Expect(2) = 1e-75
 Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
 Frame = -3

Query: 1034 NSK*KVIENDICSVKAENEQLDFSVNSTVAD--LLEKIDFEFEQGLIDSYSDLISESNLD 861
            N+  K +EN      A  E     V+S+       E ++F+F+QGL+D+YSDLI++ N D
Sbjct: 326  NASVKALENIFDDSLAVREAAANGVHSSSKSEGTFENMEFDFDQGLMDAYSDLIAQINPD 385

Query: 860  EVFDLDEVFKQE 825
            +  DL+ VF +E
Sbjct: 386  DFLDLEGVFSKE 397


>emb|CBI32194.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  278 bits (712), Expect = 3e-72
 Identities = 143/242 (59%), Positives = 180/242 (74%), Gaps = 5/242 (2%)
 Frame = -1

Query: 1780 LEDVKRVADSAQRKRAKLCGDSQHRLP--LKYLGNAAANRRTKIIFLPTGMSKRQTNQSF 1607
            LE+VK VA+SAQR+R KLCG SQ + P  L+ L NAA +RRTK++FLP+GMSKR+ N+S 
Sbjct: 76   LEEVKSVAESAQRRRVKLCGYSQLKFPYHLRGLRNAAGSRRTKLLFLPSGMSKREKNKSQ 135

Query: 1606 YDHRKKVISWTIEWRFHSTDVVLHDHGVDENTSLSSVIMNHLQPGPWNHRLKRFCEEPLQ 1427
            Y+ R K I+WTIEWRFHSTDVVL DHG++EN++LSSVI  HL+PGPWNH+LK FC E L 
Sbjct: 136  YNQRSKCITWTIEWRFHSTDVVLLDHGINENSTLSSVIEKHLKPGPWNHKLKPFCAEQLD 195

Query: 1426 SLKLFVRKFAKGSKSPFLELDIDAPMRKQLANLVIIEYPVIHVFLPSHHYDFEVIKAA-- 1253
             LK F+RK+ KG +SPF ELDI AP+R+Q ANL I+EYP IHVFLPSH YDF+VIK A  
Sbjct: 196  CLKFFIRKYPKGPRSPFHELDIRAPIRQQFANLAILEYPQIHVFLPSHSYDFDVIKDANP 255

Query: 1252 IRQKPDPKKSIGNQEQSPKGVPFREEEIKDE-NSPDPKVLDLMNYGKQNGIDKISHQPTG 1076
              ++ + K+S+   + SPKG+ FREEEI++   S D KVLDLM + K    +K    P  
Sbjct: 256  RHRQAELKESLTIDQPSPKGISFREEEIEEHGGSLDSKVLDLMQHVKSTQANKPQSSPQK 315

Query: 1075 TE 1070
             E
Sbjct: 316  KE 317


>ref|XP_002269272.1| PREDICTED: box C/D snoRNA protein 1 [Vitis vinifera]
            gi|147778999|emb|CAN60314.1| hypothetical protein
            VITISV_036305 [Vitis vinifera]
          Length = 385

 Score =  278 bits (712), Expect = 3e-72
 Identities = 143/242 (59%), Positives = 180/242 (74%), Gaps = 5/242 (2%)
 Frame = -1

Query: 1780 LEDVKRVADSAQRKRAKLCGDSQHRLP--LKYLGNAAANRRTKIIFLPTGMSKRQTNQSF 1607
            LE+VK VA+SAQR+R KLCG SQ + P  L+ L NAA +RRTK++FLP+GMSKR+ N+S 
Sbjct: 76   LEEVKSVAESAQRRRVKLCGYSQLKFPYHLRGLRNAAGSRRTKLLFLPSGMSKREKNKSQ 135

Query: 1606 YDHRKKVISWTIEWRFHSTDVVLHDHGVDENTSLSSVIMNHLQPGPWNHRLKRFCEEPLQ 1427
            Y+ R K I+WTIEWRFHSTDVVL DHG++EN++LSSVI  HL+PGPWNH+LK FC E L 
Sbjct: 136  YNQRSKCITWTIEWRFHSTDVVLLDHGINENSTLSSVIEKHLKPGPWNHKLKPFCAEQLD 195

Query: 1426 SLKLFVRKFAKGSKSPFLELDIDAPMRKQLANLVIIEYPVIHVFLPSHHYDFEVIKAA-- 1253
             LK F+RK+ KG +SPF ELDI AP+R+Q ANL I+EYP IHVFLPSH YDF+VIK A  
Sbjct: 196  CLKFFIRKYPKGPRSPFHELDIRAPIRQQFANLAILEYPQIHVFLPSHSYDFDVIKDANP 255

Query: 1252 IRQKPDPKKSIGNQEQSPKGVPFREEEIKDE-NSPDPKVLDLMNYGKQNGIDKISHQPTG 1076
              ++ + K+S+   + SPKG+ FREEEI++   S D KVLDLM + K    +K    P  
Sbjct: 256  RHRQAELKESLTIDQPSPKGISFREEEIEEHGGSLDSKVLDLMQHVKSTQANKPQSSPQK 315

Query: 1075 TE 1070
             E
Sbjct: 316  KE 317


>ref|XP_002512150.1| conserved hypothetical protein [Ricinus communis]
            gi|223548694|gb|EEF50184.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 411

 Score =  268 bits (686), Expect = 3e-69
 Identities = 136/219 (62%), Positives = 166/219 (75%), Gaps = 3/219 (1%)
 Frame = -1

Query: 1780 LEDVKRVADSAQRKRAKLCGDSQHRLP--LKYLGNAAANRRTKIIFLPTGMSKRQTNQSF 1607
            LE+ KRVA+SAQR R KLC   Q RLP  L+ L  AAA+RRTK+IFLP+GMSKR+ NQS 
Sbjct: 78   LEETKRVAESAQRMRTKLCAYPQFRLPAYLQSLRRAAASRRTKLIFLPSGMSKREKNQSR 137

Query: 1606 YDHRKKVISWTIEWRFHSTDVVLHDHGVDENTSLSSVIMNHLQPGPWNHRLKRFCEEPLQ 1427
            Y+ RKK I+WT+EWRFH+TDVVL DHGV E+ +L SVI  HL PGPWNH+L++FCEE L 
Sbjct: 138  YNQRKKFIAWTVEWRFHTTDVVLLDHGVHEDRNLFSVIEQHLNPGPWNHQLRQFCEEQLD 197

Query: 1426 SLKLFVRKFAKGSKSPFLELDIDAPMRKQLANLVIIEYPVIHVFLPSHHYDFEVIKAAIR 1247
            SLK F+RK+ KG KSPF ELDI AP+R+QLAN+VI+E P+IHVFLPSH  DFEV+K    
Sbjct: 198  SLKFFIRKYPKGPKSPFCELDIKAPLRQQLANIVILENPIIHVFLPSHGCDFEVVKC--- 254

Query: 1246 QKPDPKKSIGNQEQSPKGVPFREEEIKDEN-SPDPKVLD 1133
             +    +   N   SPKGV FREEEI++ N S DP++ D
Sbjct: 255  MQSVTHRQETNNSASPKGVSFREEEIEESNGSSDPQIYD 293


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