BLASTX nr result

ID: Cnidium21_contig00020127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020127
         (1307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM95643.1| WD-repeat protein GhTTG2 [Gossypium hirsutum] gi|...   538   e-150
ref|XP_002334240.1| predicted protein [Populus trichocarpa] gi|2...   538   e-150
ref|XP_002301564.1| predicted protein [Populus trichocarpa] gi|2...   537   e-150
ref|XP_004145624.1| PREDICTED: WD repeat-containing protein LWD1...   537   e-150
ref|XP_002278469.1| PREDICTED: WD repeat-containing protein LWD1...   535   e-149

>gb|AAM95643.1| WD-repeat protein GhTTG2 [Gossypium hirsutum]
            gi|22324805|gb|AAM95644.1| WD-repeat protein GhTTG2
            [Gossypium hirsutum]
          Length = 346

 Score =  538 bits (1386), Expect = e-150
 Identities = 268/331 (80%), Positives = 282/331 (85%), Gaps = 2/331 (0%)
 Frame = -1

Query: 1307 AMNWSVRRDKTYRLAIASLLEHYHNRVEIVQLDDVNGEIKPDPNLSFEHPYPPTKTIFIP 1128
            AMNWSVRRDK YRLAIASLLEHY+NR+EIVQLDD NGEI+ DPNLSF+HPYPPTKTIFIP
Sbjct: 32   AMNWSVRRDKKYRLAIASLLEHYNNRLEIVQLDDSNGEIRSDPNLSFDHPYPPTKTIFIP 91

Query: 1127 DKECQKPDLFATSSDFLRIWQINSDS--VELKSVLNNNRNSEFCGPLTSFDWNEAEPRRV 954
            DKECQKPDL ATSSDFLRIW+I+ D   V+LKS+LN N+NSEFCGPLTSFDWNEAEP+R+
Sbjct: 92   DKECQKPDLLATSSDFLRIWRISDDHSRVDLKSLLNGNKNSEFCGPLTSFDWNEAEPKRI 151

Query: 953  GSSSIDTTCTIWDVERECVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEH 774
            G+SSIDTTCTIWD+ERE VDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEH
Sbjct: 152  GTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEH 211

Query: 773  STIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASAN 594
            STIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQAS N
Sbjct: 212  STIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVN 271

Query: 593  AIAWAPHSSCHICTAGDDSQALIWDLSTMGQPVEGGLDPIXXXXXXXXXXXXXXXXXXXX 414
            AIAWAPHSSCHICTAGDDSQALIWDLS+M QPVEGGLDPI                    
Sbjct: 272  AIAWAPHSSCHICTAGDDSQALIWDLSSMSQPVEGGLDPI----------------LAYT 315

Query: 413  XXXXXXXXXXXXXXXXWVAIAFSNKLQILRV 321
                            WVAIAFS KLQILRV
Sbjct: 316  AGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346


>ref|XP_002334240.1| predicted protein [Populus trichocarpa]
            gi|224131364|ref|XP_002321066.1| predicted protein
            [Populus trichocarpa] gi|222861839|gb|EEE99381.1|
            predicted protein [Populus trichocarpa]
            gi|222870324|gb|EEF07455.1| predicted protein [Populus
            trichocarpa]
          Length = 346

 Score =  538 bits (1385), Expect = e-150
 Identities = 268/331 (80%), Positives = 280/331 (84%), Gaps = 2/331 (0%)
 Frame = -1

Query: 1307 AMNWSVRRDKTYRLAIASLLEHYHNRVEIVQLDDVNGEIKPDPNLSFEHPYPPTKTIFIP 1128
            AMNWSVRRDK YRLAIASLLE Y NRVEIVQLDD NGEI+ DPNLSFEHPYPPTKTIFIP
Sbjct: 32   AMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSNGEIRSDPNLSFEHPYPPTKTIFIP 91

Query: 1127 DKECQKPDLFATSSDFLRIWQINSDS--VELKSVLNNNRNSEFCGPLTSFDWNEAEPRRV 954
            DKECQKPDL ATSSDFLR+W+IN +   VELKS+LN N+NSEFCGPLTSFDWNEAEPRR+
Sbjct: 92   DKECQKPDLLATSSDFLRVWRINDEQPRVELKSLLNGNKNSEFCGPLTSFDWNEAEPRRI 151

Query: 953  GSSSIDTTCTIWDVERECVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEH 774
            G+SSIDTTCTIWD+E+E VDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEH
Sbjct: 152  GTSSIDTTCTIWDIEKETVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEH 211

Query: 773  STIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASAN 594
            STIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRH AS N
Sbjct: 212  STIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHHASVN 271

Query: 593  AIAWAPHSSCHICTAGDDSQALIWDLSTMGQPVEGGLDPIXXXXXXXXXXXXXXXXXXXX 414
            A+AWAPHSSCHICTAGDDSQALIWDLS+MGQPVEGGLDPI                    
Sbjct: 272  AVAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPI----------------LAYT 315

Query: 413  XXXXXXXXXXXXXXXXWVAIAFSNKLQILRV 321
                            WVAIAFS KLQILRV
Sbjct: 316  AGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346


>ref|XP_002301564.1| predicted protein [Populus trichocarpa] gi|222843290|gb|EEE80837.1|
            predicted protein [Populus trichocarpa]
          Length = 346

 Score =  537 bits (1384), Expect = e-150
 Identities = 268/331 (80%), Positives = 280/331 (84%), Gaps = 2/331 (0%)
 Frame = -1

Query: 1307 AMNWSVRRDKTYRLAIASLLEHYHNRVEIVQLDDVNGEIKPDPNLSFEHPYPPTKTIFIP 1128
            AMNWSVRRDK YRLAIASLLE Y NRVEIVQLD+ NGEI+ DPNLSFEHPYPPTKTIFIP
Sbjct: 32   AMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDESNGEIRSDPNLSFEHPYPPTKTIFIP 91

Query: 1127 DKECQKPDLFATSSDFLRIWQINSDS--VELKSVLNNNRNSEFCGPLTSFDWNEAEPRRV 954
            DKECQKPDL ATSSDFLR+W+IN +   VELKS+LN N+NSEFCGPLTSFDWNEAEPRR+
Sbjct: 92   DKECQKPDLLATSSDFLRVWRINDEQPRVELKSLLNGNKNSEFCGPLTSFDWNEAEPRRI 151

Query: 953  GSSSIDTTCTIWDVERECVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEH 774
            G+SSIDTTCTIWD+ERE VDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEH
Sbjct: 152  GTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEH 211

Query: 773  STIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASAN 594
            STIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRH AS N
Sbjct: 212  STIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHHASVN 271

Query: 593  AIAWAPHSSCHICTAGDDSQALIWDLSTMGQPVEGGLDPIXXXXXXXXXXXXXXXXXXXX 414
            A+AWAPHSSCHICTAGDDSQALIWDLS+MGQPVEGGLDPI                    
Sbjct: 272  AVAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPI----------------LAYT 315

Query: 413  XXXXXXXXXXXXXXXXWVAIAFSNKLQILRV 321
                            WVAIAFS KLQILRV
Sbjct: 316  AGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346


>ref|XP_004145624.1| PREDICTED: WD repeat-containing protein LWD1-like [Cucumis sativus]
            gi|449501305|ref|XP_004161333.1| PREDICTED: WD
            repeat-containing protein LWD1-like [Cucumis sativus]
          Length = 346

 Score =  537 bits (1383), Expect = e-150
 Identities = 268/331 (80%), Positives = 282/331 (85%), Gaps = 2/331 (0%)
 Frame = -1

Query: 1307 AMNWSVRRDKTYRLAIASLLEHYHNRVEIVQLDDVNGEIKPDPNLSFEHPYPPTKTIFIP 1128
            AMNWSVRRDK YRLAIASLLE Y NRVEIVQLDD +GEI+ DPNLSFEHPYPPTKTIFIP
Sbjct: 32   AMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSGEIRSDPNLSFEHPYPPTKTIFIP 91

Query: 1127 DKECQKPDLFATSSDFLRIWQINSD--SVELKSVLNNNRNSEFCGPLTSFDWNEAEPRRV 954
            DKECQ+PDL ATSSDFLR+W+I+ D  SVELKS+LN N+NSEFCGPLTSFDWN+AEP+R+
Sbjct: 92   DKECQRPDLLATSSDFLRVWRISDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRI 151

Query: 953  GSSSIDTTCTIWDVERECVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEH 774
            G+SSIDTTCTIWD+ERE VDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEH
Sbjct: 152  GTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEH 211

Query: 773  STIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASAN 594
            STIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQAS N
Sbjct: 212  STIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVN 271

Query: 593  AIAWAPHSSCHICTAGDDSQALIWDLSTMGQPVEGGLDPIXXXXXXXXXXXXXXXXXXXX 414
            AIAWAPHSSCHICTAGDDSQALIWDLS+MGQPVEGGLDPI                    
Sbjct: 272  AIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPI----------------LAYT 315

Query: 413  XXXXXXXXXXXXXXXXWVAIAFSNKLQILRV 321
                            WVAIAFS KLQILRV
Sbjct: 316  AGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346


>ref|XP_002278469.1| PREDICTED: WD repeat-containing protein LWD1 isoform 1 [Vitis
            vinifera] gi|359488412|ref|XP_003633757.1| PREDICTED: WD
            repeat-containing protein LWD1 isoform 2 [Vitis vinifera]
            gi|113707436|gb|ABF66626.2| WD repeat 2 [Vitis vinifera]
          Length = 344

 Score =  535 bits (1377), Expect = e-149
 Identities = 266/329 (80%), Positives = 277/329 (84%)
 Frame = -1

Query: 1307 AMNWSVRRDKTYRLAIASLLEHYHNRVEIVQLDDVNGEIKPDPNLSFEHPYPPTKTIFIP 1128
            AMNWSVRRDK YRLAIASLLE Y NRVEIVQLDD  GEI+ DPNLSFEH YPPTKTIFIP
Sbjct: 32   AMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRSDPNLSFEHHYPPTKTIFIP 91

Query: 1127 DKECQKPDLFATSSDFLRIWQINSDSVELKSVLNNNRNSEFCGPLTSFDWNEAEPRRVGS 948
            DK+CQKPDL ATSSDFLR+W I+ D VELK +LN NRNSEFCGPLTSFDWNEAEP+R+G+
Sbjct: 92   DKDCQKPDLLATSSDFLRVWNISDDRVELKCLLNGNRNSEFCGPLTSFDWNEAEPKRIGT 151

Query: 947  SSIDTTCTIWDVERECVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHST 768
            SSIDTTCTIWD+ERE VDTQLIAHDKEV+DIAWGGVGVFASVSADGSVRVFDLRDKEHST
Sbjct: 152  SSIDTTCTIWDIERETVDTQLIAHDKEVFDIAWGGVGVFASVSADGSVRVFDLRDKEHST 211

Query: 767  IIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAI 588
            IIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQAS NAI
Sbjct: 212  IIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAI 271

Query: 587  AWAPHSSCHICTAGDDSQALIWDLSTMGQPVEGGLDPIXXXXXXXXXXXXXXXXXXXXXX 408
            AWAPHSSCHICTAGDDSQALIWDLS+MGQPVEGGLDPI                      
Sbjct: 272  AWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPI----------------LAYTAG 315

Query: 407  XXXXXXXXXXXXXXWVAIAFSNKLQILRV 321
                          WVAIAFS KLQILRV
Sbjct: 316  AEIEQLQWSSSQPDWVAIAFSTKLQILRV 344


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