BLASTX nr result
ID: Cnidium21_contig00020090
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00020090 (482 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 93 3e-17 gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 93 3e-17 emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group] 91 7e-17 gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 89 5e-16 emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 88 6e-16 >gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] Length = 1291 Score = 92.8 bits (229), Expect = 3e-17 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 3/163 (1%) Frame = +2 Query: 2 RDVTFEELESWPWNETGNEQEVTEQFDVQLADESDCDAQSPPIEEPEENFSQGDXXXXXX 181 R++ F+E W WN + F+ DE + + PP EEP Sbjct: 685 RNIVFDEEGEWDWNSNEEDYNFFPHFE---EDEPEPTREEPPSEEP-------------- 727 Query: 182 XXNDRSTMICLNPEDYDDSHEPKNQRLLSDIYEATEEIRDELNLMGVD---EPGSFKHAV 352 R T + + + S R + ++YE TE ++ L L + EP F+ A+ Sbjct: 728 --TTRPTSLTSSQIEESSSERTPRFRSIQELYEVTEN-QENLTLFCLFAECEPMDFQEAI 784 Query: 353 KDDNWKQAMEQEMESIEENDTWELTKLPPGKKIIGLKWVYKLK 481 + W+ AM++E++SI++NDTWELT LP G K IG+KWVYK K Sbjct: 785 EKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAK 827 >gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1| copia-type polyprotein [Glycine max] Length = 1042 Score = 92.8 bits (229), Expect = 3e-17 Identities = 50/160 (31%), Positives = 83/160 (51%) Frame = +2 Query: 2 RDVTFEELESWPWNETGNEQEVTEQFDVQLADESDCDAQSPPIEEPEENFSQGDXXXXXX 181 RDV F E +W W E + + F+ ++ +E+ S P P + ++ Sbjct: 437 RDVEFYEEGTWNWEEKEDTYDFFPYFE-EIDEEALTPNDSTPALSPTPSTNEAS------ 489 Query: 182 XXNDRSTMICLNPEDYDDSHEPKNQRLLSDIYEATEEIRDELNLMGVDEPGSFKHAVKDD 361 + + S P+ R + ++Y+ TE I D L +P +F A+KD Sbjct: 490 -----------SSSEGSSSERPRRMRNIQELYDETEVINDLFCLFVDSKPLNFDEAMKDK 538 Query: 362 NWKQAMEQEMESIEENDTWELTKLPPGKKIIGLKWVYKLK 481 W+QAME+E+++IE+N+TWEL+ LP G + IG+KWV+K+K Sbjct: 539 RWRQAMEEEIKAIEKNNTWELSSLPKGHEAIGVKWVFKIK 578 >emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group] Length = 1425 Score = 91.3 bits (225), Expect = 7e-17 Identities = 60/173 (34%), Positives = 80/173 (46%), Gaps = 13/173 (7%) Frame = +2 Query: 2 RDVTFEELESWPWNETGN----EQEVTEQFDVQLADESDCDA---QSPPIEEPEENFSQG 160 RDV F+E +W W + + E+E T F V S DA P++ S G Sbjct: 795 RDVVFDETATWAWRDPEDAATEEEEFTVDFFVSPVAPSVADAGEQTGTPVQAGVSPVSTG 854 Query: 161 DXXXXXXXXNDRSTMICLNPEDYDDSHE--PKNQRLLSDIYEATEEIRD----ELNLMGV 322 N C P + P R + DI TE + D + L+ Sbjct: 855 VLSSPPRAPNGE---FCTPPTSVTPETDGGPVRYRRVQDILSTTEPVLDFDYSDQCLIAT 911 Query: 323 DEPGSFKHAVKDDNWKQAMEQEMESIEENDTWELTKLPPGKKIIGLKWVYKLK 481 +EP SF A K + W++AM +E+ S+EEN TW L +LP G K IGLKWVYKLK Sbjct: 912 EEPTSFVEAEKHECWRRAMVEELRSVEENQTWSLAELPAGHKAIGLKWVYKLK 964 >gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana] Length = 1352 Score = 88.6 bits (218), Expect = 5e-16 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 3/163 (1%) Frame = +2 Query: 2 RDVTFEELESWPWNETGNEQEVTEQFDVQLADESDCDAQSPPIEEPEENFSQGDXXXXXX 181 R++ F+E W WN + F+ DE + + PP EEP Sbjct: 746 RNIVFDEEGEWDWNSNEEDYNFFPHFE---EDEPEPTREEPPSEEPTT-----------P 791 Query: 182 XXNDRSTMICLNPEDYDDSHEPKNQRLLSDIYEATEEIRDELNLMGVD---EPGSFKHAV 352 + S+ I + S R + ++YE TE ++ L L + EP F+ A+ Sbjct: 792 PTSPTSSQI-----EESSSERTPRFRSIQELYEVTEN-QENLTLFCLFAECEPMDFQEAI 845 Query: 353 KDDNWKQAMEQEMESIEENDTWELTKLPPGKKIIGLKWVYKLK 481 + W+ AM++E++SI++NDTWELT LP G K IG+KWVYK K Sbjct: 846 EKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAK 888 >emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] Length = 1352 Score = 88.2 bits (217), Expect = 6e-16 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 3/163 (1%) Frame = +2 Query: 2 RDVTFEELESWPWNETGNEQEVTEQFDVQLADESDCDAQSPPIEEPEENFSQGDXXXXXX 181 R++ F+E W WN + F+ DE + + PP EEP Sbjct: 746 RNIVFDEEGEWDWNSNEEDYNFFPHFE---EDEPEPTREEPPSEEPTT-----------P 791 Query: 182 XXNDRSTMICLNPEDYDDSHEPKNQRLLSDIYEATEEIRDELNLMGVD---EPGSFKHAV 352 + S+ I + S R + ++YE TE ++ L L + EP F+ A+ Sbjct: 792 PTSPTSSQI-----EESSSERTPRFRSIQELYEVTEN-QENLTLFCLFAECEPMDFQKAI 845 Query: 353 KDDNWKQAMEQEMESIEENDTWELTKLPPGKKIIGLKWVYKLK 481 + W+ AM++E++SI++NDTWELT LP G K IG+KWVYK K Sbjct: 846 EKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAK 888