BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020065
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   197   7e-49
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              192   2e-47
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   192   2e-47
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...   191   5e-47
ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|2...   190   1e-46

>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score =  197 bits (501), Expect = 7e-49
 Identities = 93/108 (86%), Positives = 100/108 (92%)
 Frame = -1

Query: 326  QGIVPDIVINPHAFPSRQTPGQLLEGALGKGIALKGIEKYATPFSTLSVDGIADQLHKAG 147
            QGIVPDIV+NPHAFPSRQTPGQLLE ALGKGIA  G++KYATPFSTLSVD + DQLH+AG
Sbjct: 796  QGIVPDIVVNPHAFPSRQTPGQLLEAALGKGIACGGLQKYATPFSTLSVDAVTDQLHRAG 855

Query: 146  LSRWGSERVYDGRTGEMIRSLVFMGPTCYQRLTHMAEDKVKFRNTGPV 3
             SRWGSERVY+GRTGEMI SLVFMGPT YQRLTHM+EDKVKFRNTGPV
Sbjct: 856  FSRWGSERVYNGRTGEMIHSLVFMGPTFYQRLTHMSEDKVKFRNTGPV 903


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  192 bits (488), Expect = 2e-47
 Identities = 92/108 (85%), Positives = 99/108 (91%)
 Frame = -1

Query: 326  QGIVPDIVINPHAFPSRQTPGQLLEGALGKGIALKGIEKYATPFSTLSVDGIADQLHKAG 147
            QGIVPDIVINPHAFPSRQTPGQLLE ALGKGIA  G+ ++ATPFSTLSVD IADQLH+AG
Sbjct: 997  QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAG 1056

Query: 146  LSRWGSERVYDGRTGEMIRSLVFMGPTCYQRLTHMAEDKVKFRNTGPV 3
             SRWG ERVY+GRTGEM+RSL+FMGPT YQRL HMAEDKVKFRNTGPV
Sbjct: 1057 FSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPV 1104


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score =  192 bits (488), Expect = 2e-47
 Identities = 92/108 (85%), Positives = 99/108 (91%)
 Frame = -1

Query: 326  QGIVPDIVINPHAFPSRQTPGQLLEGALGKGIALKGIEKYATPFSTLSVDGIADQLHKAG 147
            QGIVPDIVINPHAFPSRQTPGQLLE ALGKGIA  G+ ++ATPFSTLSVD IADQLH+AG
Sbjct: 975  QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAG 1034

Query: 146  LSRWGSERVYDGRTGEMIRSLVFMGPTCYQRLTHMAEDKVKFRNTGPV 3
             SRWG ERVY+GRTGEM+RSL+FMGPT YQRL HMAEDKVKFRNTGPV
Sbjct: 1035 FSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPV 1082


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score =  191 bits (485), Expect = 5e-47
 Identities = 93/108 (86%), Positives = 97/108 (89%)
 Frame = -1

Query: 326  QGIVPDIVINPHAFPSRQTPGQLLEGALGKGIALKGIEKYATPFSTLSVDGIADQLHKAG 147
            QGIVPDIVINPHAFPSRQTPGQLLE ALGKGIA  G  KYATPFST SVD I DQLH+AG
Sbjct: 974  QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHRAG 1033

Query: 146  LSRWGSERVYDGRTGEMIRSLVFMGPTCYQRLTHMAEDKVKFRNTGPV 3
             SRWGSERVY+GRTGEM+RSL+FMGPT YQRL HMAEDKVKFRNTGPV
Sbjct: 1034 FSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPV 1081


>ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|222865766|gb|EEF02897.1|
            predicted protein [Populus trichocarpa]
          Length = 1160

 Score =  190 bits (482), Expect = 1e-46
 Identities = 90/108 (83%), Positives = 98/108 (90%)
 Frame = -1

Query: 326  QGIVPDIVINPHAFPSRQTPGQLLEGALGKGIALKGIEKYATPFSTLSVDGIADQLHKAG 147
            QG+VPDIVINPHAFPSRQTPGQLLE ALGKGIA  G ++YATPFSTLSVD I DQLH+A 
Sbjct: 937  QGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDIIDQLHRAK 996

Query: 146  LSRWGSERVYDGRTGEMIRSLVFMGPTCYQRLTHMAEDKVKFRNTGPV 3
             SRWG+ERVY+GRTGEM+RSL+FMGPT YQRL HMAEDKVKFRNTGPV
Sbjct: 997  FSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMAEDKVKFRNTGPV 1044