BLASTX nr result

ID: Cnidium21_contig00020059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020059
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19350.3| unnamed protein product [Vitis vinifera]              281   1e-73
ref|XP_002283520.1| PREDICTED: uncharacterized membrane protein ...   281   1e-73
ref|XP_002510037.1| conserved hypothetical protein [Ricinus comm...   259   5e-67
ref|XP_002302379.1| predicted protein [Populus trichocarpa] gi|2...   258   7e-67
dbj|BAD43330.1| unnamed protein product [Arabidopsis thaliana]        258   9e-67

>emb|CBI19350.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  281 bits (718), Expect = 1e-73
 Identities = 132/194 (68%), Positives = 158/194 (81%)
 Frame = -1

Query: 584 MNVSGLLTSAGINVAVCTVLSSLYSVLRKQPSNVKVYFGQRLAQVQSKGHGPSFFERFVP 405
           M +  LLTSAGIN+A C +L SLYS+LRKQPSNV VYFG+RLAQ   K H P  FERFVP
Sbjct: 1   MKLYALLTSAGINIAFCAILLSLYSILRKQPSNVSVYFGRRLAQFSPKPHDPFCFERFVP 60

Query: 404 SPSWIIKAWQTSEEDLFAVGGLDAAVFSRVVIFSIRILSVAAVICIFLVLPVNYFGQSMH 225
           SP W++KAW+TSEE++ +VGG+DA VF R+V+FSIRI ++AA+ICIFLVLPVNY+GQ++H
Sbjct: 61  SPGWMVKAWETSEEEILSVGGMDAVVFLRIVVFSIRIFAIAAIICIFLVLPVNYYGQAVH 120

Query: 224 HKKIQLESLEVFTIGNVVERSKWLWVHCLALYVISCCACALLYIENKNITKMRLAYISGS 45
           H  I  ESL+VFTIGN+ E SKWLWVHC ALYVISC AC LLY E K+IT MRLA+I+GS
Sbjct: 121 HGHIPSESLDVFTIGNIKEGSKWLWVHCFALYVISCSACVLLYFEYKSITNMRLAHITGS 180

Query: 44  PQNLGRFTVLVRAI 3
           P N   F VLVR+I
Sbjct: 181 PPNPSHFAVLVRSI 194


>ref|XP_002283520.1| PREDICTED: uncharacterized membrane protein YLR241W-like [Vitis
           vinifera]
          Length = 717

 Score =  281 bits (718), Expect = 1e-73
 Identities = 132/194 (68%), Positives = 158/194 (81%)
 Frame = -1

Query: 584 MNVSGLLTSAGINVAVCTVLSSLYSVLRKQPSNVKVYFGQRLAQVQSKGHGPSFFERFVP 405
           M +  LLTSAGIN+A C +L SLYS+LRKQPSNV VYFG+RLAQ   K H P  FERFVP
Sbjct: 1   MKLYALLTSAGINIAFCAILLSLYSILRKQPSNVSVYFGRRLAQFSPKPHDPFCFERFVP 60

Query: 404 SPSWIIKAWQTSEEDLFAVGGLDAAVFSRVVIFSIRILSVAAVICIFLVLPVNYFGQSMH 225
           SP W++KAW+TSEE++ +VGG+DA VF R+V+FSIRI ++AA+ICIFLVLPVNY+GQ++H
Sbjct: 61  SPGWMVKAWETSEEEILSVGGMDAVVFLRIVVFSIRIFAIAAIICIFLVLPVNYYGQAVH 120

Query: 224 HKKIQLESLEVFTIGNVVERSKWLWVHCLALYVISCCACALLYIENKNITKMRLAYISGS 45
           H  I  ESL+VFTIGN+ E SKWLWVHC ALYVISC AC LLY E K+IT MRLA+I+GS
Sbjct: 121 HGHIPSESLDVFTIGNIKEGSKWLWVHCFALYVISCSACVLLYFEYKSITNMRLAHITGS 180

Query: 44  PQNLGRFTVLVRAI 3
           P N   F VLVR+I
Sbjct: 181 PPNPSHFAVLVRSI 194


>ref|XP_002510037.1| conserved hypothetical protein [Ricinus communis]
           gi|223550738|gb|EEF52224.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 731

 Score =  259 bits (661), Expect = 5e-67
 Identities = 122/194 (62%), Positives = 155/194 (79%)
 Frame = -1

Query: 584 MNVSGLLTSAGINVAVCTVLSSLYSVLRKQPSNVKVYFGQRLAQVQSKGHGPSFFERFVP 405
           M+++ LLTSAGIN+ +C VL SLYS+LRKQPSN  VYFG+RLA V+ +       ERFVP
Sbjct: 1   MDIAALLTSAGINIGLCIVLLSLYSILRKQPSNRVVYFGRRLASVRIRNTDFFSIERFVP 60

Query: 404 SPSWIIKAWQTSEEDLFAVGGLDAAVFSRVVIFSIRILSVAAVICIFLVLPVNYFGQSMH 225
           SPSWI+KAW+T+EE++ A+GGLDA  F R++IFSIR+ S+AAVIC+ LVLP+NY+G+ M 
Sbjct: 61  SPSWIVKAWETTEEEILAIGGLDALAFQRMLIFSIRVFSIAAVICLLLVLPMNYYGKEMQ 120

Query: 224 HKKIQLESLEVFTIGNVVERSKWLWVHCLALYVISCCACALLYIENKNITKMRLAYISGS 45
           HK I  ESL+VFTIGNV E S+WLW HCLALY+ISC AC LLY E K+IT+MRLA+I+ S
Sbjct: 121 HKWIPSESLDVFTIGNVKEGSRWLWAHCLALYIISCAACVLLYFEYKSITEMRLAHITKS 180

Query: 44  PQNLGRFTVLVRAI 3
             N   FT+LVR++
Sbjct: 181 SLNASHFTILVRSV 194


>ref|XP_002302379.1| predicted protein [Populus trichocarpa] gi|222844105|gb|EEE81652.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  258 bits (660), Expect = 7e-67
 Identities = 123/195 (63%), Positives = 152/195 (77%), Gaps = 1/195 (0%)
 Frame = -1

Query: 584 MNVSGLLTSAGINVAVCTVLSSLYSVLRKQPSNVKVYFGQRLAQVQSKGHGPSF-FERFV 408
           M++  LLTSA IN  +  +L SLYS+LRKQPSN  VYFG+RLA + ++     F FERFV
Sbjct: 1   MDIGALLTSAAINTGLSVLLFSLYSILRKQPSNTIVYFGRRLASLNNRNSRNHFSFERFV 60

Query: 407 PSPSWIIKAWQTSEEDLFAVGGLDAAVFSRVVIFSIRILSVAAVICIFLVLPVNYFGQSM 228
           PSPSWI+KAW+T+E ++ A+GGLDA VF R+++FSIR+ S+AAV C+FLVLPVNY+GQ M
Sbjct: 61  PSPSWIVKAWETTENEILAIGGLDAVVFQRILVFSIRVFSIAAVTCLFLVLPVNYYGQEM 120

Query: 227 HHKKIQLESLEVFTIGNVVERSKWLWVHCLALYVISCCACALLYIENKNITKMRLAYISG 48
            HK I  ESL VFTI NV E S+WLW HCLALY+ISC AC LLY E K+ITKMRLA+I+ 
Sbjct: 121 KHKHIHAESLNVFTIANVKEGSRWLWAHCLALYIISCSACVLLYFEYKSITKMRLAHITT 180

Query: 47  SPQNLGRFTVLVRAI 3
           SP N   FT+LVR+I
Sbjct: 181 SPPNPSHFTILVRSI 195


>dbj|BAD43330.1| unnamed protein product [Arabidopsis thaliana]
          Length = 762

 Score =  258 bits (659), Expect = 9e-67
 Identities = 123/194 (63%), Positives = 152/194 (78%)
 Frame = -1

Query: 584 MNVSGLLTSAGINVAVCTVLSSLYSVLRKQPSNVKVYFGQRLAQVQSKGHGPSFFERFVP 405
           M+VS LLTSAGIN+A+C VL SLYS+LRKQP+N  VYFG+ L+  + K H P ++ERF P
Sbjct: 1   MDVSALLTSAGINIAICVVLVSLYSILRKQPANYCVYFGRLLSDGRVKRHDPRWYERFAP 60

Query: 404 SPSWIIKAWQTSEEDLFAVGGLDAAVFSRVVIFSIRILSVAAVICIFLVLPVNYFGQSMH 225
           SPSW++KAW+T+EE++ A  GLDA VF R+VI SIRI S+ AV+C+  VLPVNY+GQ M 
Sbjct: 61  SPSWLVKAWETTEEEMLAAAGLDAVVFIRMVICSIRIFSIVAVVCLAFVLPVNYYGQKME 120

Query: 224 HKKIQLESLEVFTIGNVVERSKWLWVHCLALYVISCCACALLYIENKNITKMRLAYISGS 45
           HK++ LESL VFTI N+  RS+WLWVHCL+LY+IS  ACALLY E KNI K RLA+ISGS
Sbjct: 121 HKEVHLESLGVFTIENLNPRSRWLWVHCLSLYIISSAACALLYFEYKNIAKKRLAHISGS 180

Query: 44  PQNLGRFTVLVRAI 3
                 FTVL+RAI
Sbjct: 181 ASKPSHFTVLIRAI 194


Top