BLASTX nr result

ID: Cnidium21_contig00020045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020045
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265699.1| PREDICTED: general transcription factor 3C p...   238   2e-60
emb|CBI24131.3| unnamed protein product [Vitis vinifera]              231   3e-58
ref|XP_004146849.1| PREDICTED: transcription factor tau subunit ...   174   2e-41
ref|XP_003540640.1| PREDICTED: general transcription factor 3C p...   159   8e-37
ref|XP_002330644.1| predicted protein [Populus trichocarpa] gi|2...   154   3e-35

>ref|XP_002265699.1| PREDICTED: general transcription factor 3C polypeptide 3-like
           [Vitis vinifera]
          Length = 1110

 Score =  238 bits (606), Expect = 2e-60
 Identities = 135/264 (51%), Positives = 165/264 (62%), Gaps = 2/264 (0%)
 Frame = -3

Query: 788 YKMRFDGEMDPLDFIENDA--VEKYHQFQRIENEYEALAAKKRKSLATPXXXXXXXXXXX 615
           Y +RF+  M+PLDF ENDA  ++ Y QF+R+E  YEALA KKRK+L+             
Sbjct: 33  YTLRFEDGMNPLDFTENDASGLQPYEQFERLE--YEALAEKKRKALSQ------------ 78

Query: 614 XXXXXXXXXXXXSSSNPEKKLRNDDDHVETFEEIMEAMAYXXXXXXXXXXXXXXXXXXXX 435
                             KK R++DD    F+EIME M +                    
Sbjct: 79  -----------CQFEGLAKKARHEDDSQAIFDEIMETMNHRRRRKSRKRKKSGRRKGLKN 127

Query: 434 XKVNPEVARKLGEATLHYSNERYEEARCLLKEVIRLDPYLPDPYYKLGLVYEQLNDKKKQ 255
             ++PEV RKLGEA LHY++ RYEEA  +LKEV+RL P LPD Y+  GLVY    DKK+ 
Sbjct: 128 K-LSPEVTRKLGEANLHYAHGRYEEAILVLKEVVRLAPNLPDAYHTFGLVYNAFGDKKRA 186

Query: 254 MGCYMLAAHSSPKDGSLWKLLVLLSVEEGNNEQAMYCLSKAITADPQDLSLKFDRASLYV 75
           +  YMLAAH +PKD SLWKLLV  S+E+GN  QA YCLSKAITADP+D+SL+F RASLYV
Sbjct: 187 LNFYMLAAHLTPKDSSLWKLLVTWSIEQGNTGQARYCLSKAITADPEDISLRFHRASLYV 246

Query: 74  ELGDYQKAAESYEQISRFRPELVE 3
           ELG+YQKAAESYEQIS+  PE VE
Sbjct: 247 ELGEYQKAAESYEQISQLFPENVE 270


>emb|CBI24131.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score =  231 bits (588), Expect = 3e-58
 Identities = 132/256 (51%), Positives = 160/256 (62%), Gaps = 2/256 (0%)
 Frame = -3

Query: 764 MDPLDFIENDA--VEKYHQFQRIENEYEALAAKKRKSLATPXXXXXXXXXXXXXXXXXXX 591
           M+PLDF ENDA  ++ Y QF+R+E  YEALA KKRK+L+                     
Sbjct: 1   MNPLDFTENDASGLQPYEQFERLE--YEALAEKKRKALSQ-------------------- 38

Query: 590 XXXXSSSNPEKKLRNDDDHVETFEEIMEAMAYXXXXXXXXXXXXXXXXXXXXXKVNPEVA 411
                     KK R++DD    F+EIME M +                      ++PEV 
Sbjct: 39  ---CQFEGLAKKARHEDDSQAIFDEIMETMNHRRRRKSRKRKKSGRRKGLKNK-LSPEVT 94

Query: 410 RKLGEATLHYSNERYEEARCLLKEVIRLDPYLPDPYYKLGLVYEQLNDKKKQMGCYMLAA 231
           RKLGEA LHY++ RYEEA  +LKEV+RL P LPD Y+  GLVY    DKK+ +  YMLAA
Sbjct: 95  RKLGEANLHYAHGRYEEAILVLKEVVRLAPNLPDAYHTFGLVYNAFGDKKRALNFYMLAA 154

Query: 230 HSSPKDGSLWKLLVLLSVEEGNNEQAMYCLSKAITADPQDLSLKFDRASLYVELGDYQKA 51
           H +PKD SLWKLLV  S+E+GN  QA YCLSKAITADP+D+SL+F RASLYVELG+YQKA
Sbjct: 155 HLTPKDSSLWKLLVTWSIEQGNTGQARYCLSKAITADPEDISLRFHRASLYVELGEYQKA 214

Query: 50  AESYEQISRFRPELVE 3
           AESYEQIS+  PE VE
Sbjct: 215 AESYEQISQLFPENVE 230


>ref|XP_004146849.1| PREDICTED: transcription factor tau subunit sfc4-like [Cucumis
           sativus]
          Length = 927

 Score =  174 bits (442), Expect = 2e-41
 Identities = 106/255 (41%), Positives = 143/255 (56%), Gaps = 2/255 (0%)
 Frame = -3

Query: 788 YKMRFDGEMDPLDFIEND--AVEKYHQFQRIENEYEALAAKKRKSLATPXXXXXXXXXXX 615
           Y  +F    +P DF+E    +V+ Y +F+R+E  YEALA KKRK+LA             
Sbjct: 57  YTFKFKAGENPFDFVEGTDFSVQPYKKFERLE--YEALAEKKRKALAN------------ 102

Query: 614 XXXXXXXXXXXXSSSNPEKKLRNDDDHVETFEEIMEAMAYXXXXXXXXXXXXXXXXXXXX 435
                        S    K+ R +D    +F+EI+EAM Y                    
Sbjct: 103 -----------GQSERAAKRGRVEDISGASFDEILEAMNYGSRRKLKEPKKRGRRKGSKK 151

Query: 434 XKVNPEVARKLGEATLHYSNERYEEARCLLKEVIRLDPYLPDPYYKLGLVYEQLNDKKKQ 255
             +N +V + LG+ATL Y+   +E+A  LL++V+   P LPD Y+ LGLVY  + D  K 
Sbjct: 152 K-LNRDVTKLLGDATLCYAQGEHEKAISLLRQVVLRAPDLPDSYHTLGLVYNAIGDDVKA 210

Query: 254 MGCYMLAAHSSPKDGSLWKLLVLLSVEEGNNEQAMYCLSKAITADPQDLSLKFDRASLYV 75
           MG YMLAAH  PKD SLWKLL   S++ G+ +QA YCLSKAI A+P D++L F RASLY+
Sbjct: 211 MGFYMLAAHLMPKDSSLWKLLFSWSIDRGDIDQASYCLSKAIKAEPDDINLLFHRASLYL 270

Query: 74  ELGDYQKAAESYEQI 30
           E GD +KAAE+Y+QI
Sbjct: 271 ERGDCEKAAETYDQI 285


>ref|XP_003540640.1| PREDICTED: general transcription factor 3C polypeptide 3-like
           [Glycine max]
          Length = 919

 Score =  159 bits (403), Expect = 8e-37
 Identities = 100/271 (36%), Positives = 139/271 (51%), Gaps = 9/271 (3%)
 Frame = -3

Query: 788 YKMRFDGEMDPLDFIEND---AVEKYHQFQRIENEYEALAAKKRKSLATPXXXXXXXXXX 618
           Y  RF   M+PLDF++++    ++ Y +F R+E E  ALA KKRK+              
Sbjct: 43  YTFRFKTGMNPLDFVDDNDDSGIQPYQRFVRLERE--ALADKKRKA-------------- 86

Query: 617 XXXXXXXXXXXXXSSSNPEKKLRNDDDHVETFEEIMEAMAYXXXXXXXXXXXXXXXXXXX 438
                        S   P K  R  D       EIMEAM Y                   
Sbjct: 87  --------PEQCHSEEPPSKMAREGDISGAKIAEIMEAMDYYGMRKRSRKPKKRGRRKGS 138

Query: 437 XXKVNPEVARKLGEATLHYSNERYEEARCLLKEVIRLDPYLPDPYYKLGLVYEQLNDKKK 258
             +V+P++ +  G+AT HY+   Y+ A+ +L EVIRL P L + Y+ LGLVY  L D K+
Sbjct: 139 KNRVDPKLTQMQGDATFHYACGDYDRAKAVLCEVIRLAPNLHESYHTLGLVYTSLQDYKR 198

Query: 257 QMGCYMLAAHSSPKDGSLWKLLVLLSV------EEGNNEQAMYCLSKAITADPQDLSLKF 96
            M  Y++AAH  PK+  LWK +   S+      E+G  +QA YCL KAI ADP+D++L+F
Sbjct: 199 AMALYLIAAHLDPKESPLWKTIFTWSITFFKCREQGYVDQAGYCLLKAIKADPKDVTLRF 258

Query: 95  DRASLYVELGDYQKAAESYEQISRFRPELVE 3
             A LY ELG YQKAA +YEQ+ +   E ++
Sbjct: 259 HLARLYAELGHYQKAAVTYEQVHKLCCENID 289


>ref|XP_002330644.1| predicted protein [Populus trichocarpa] gi|222872248|gb|EEF09379.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score =  154 bits (390), Expect = 3e-35
 Identities = 101/258 (39%), Positives = 135/258 (52%), Gaps = 1/258 (0%)
 Frame = -3

Query: 773 DGEMDPLDFIENDAVEKYHQFQRIENEYEALAAKKRKSLATPXXXXXXXXXXXXXXXXXX 594
           D E +  +  E +A++   Q Q+ E  YEALA KKRK+LA                    
Sbjct: 48  DDEEEEEEEEEENALDSMEQNQQFE--YEALAEKKRKTLADA------------------ 87

Query: 593 XXXXXSSSNPEKKLRNDDDHVETFEEIMEAMAYXXXXXXXXXXXXXXXXXXXXXK-VNPE 417
                      KK R +D    +  EI E M +                       ++PE
Sbjct: 88  -----KGEGSAKKARQEDMTGASLAEIEEIMNFGMRKKRRRRMPKRRGRRKGSKNKLSPE 142

Query: 416 VARKLGEATLHYSNERYEEARCLLKEVIRLDPYLPDPYYKLGLVYEQLNDKKKQMGCYML 237
           + R LG+ATLHY++  YEEA  +L EV++  P + D Y+ LGLV++ L + +K M  Y +
Sbjct: 143 ITRMLGDATLHYAHGNYEEALTVLSEVVKRAPLVADSYHTLGLVHKALGNTEKAMKFYRI 202

Query: 236 AAHSSPKDGSLWKLLVLLSVEEGNNEQAMYCLSKAITADPQDLSLKFDRASLYVELGDYQ 57
           AA   PKD SLWKLL    VE+G+  +A  CLSKAI+ADP D+SL+   A  Y ELGD+Q
Sbjct: 203 AAFLRPKDSSLWKLLFSWHVEQGDIARAWKCLSKAISADPDDISLRSLHALFYDELGDHQ 262

Query: 56  KAAESYEQISRFRPELVE 3
           +AAESYEQI R  PE VE
Sbjct: 263 RAAESYEQIVRICPEDVE 280


Top