BLASTX nr result

ID: Cnidium21_contig00020038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020038
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285669.1| PREDICTED: uncharacterized protein LOC100259...   155   2e-36
emb|CBI33363.3| unnamed protein product [Vitis vinifera]              155   2e-36
ref|NP_193103.2| protein plastid transcriptionally active 5 [Ara...   154   5e-36
emb|CAB36831.1| hypothetical protein [Arabidopsis thaliana] gi|7...   154   5e-36
ref|XP_002870363.1| predicted protein [Arabidopsis lyrata subsp....   153   1e-35

>ref|XP_002285669.1| PREDICTED: uncharacterized protein LOC100259626 [Vitis vinifera]
          Length = 372

 Score =  155 bits (393), Expect = 2e-36
 Identities = 67/101 (66%), Positives = 82/101 (81%), Gaps = 1/101 (0%)
 Frame = -3

Query: 351 KEKGVAESKVPHNRVFLLGENRWEDSSRLIGRNKQDGGSINTD-TTRCISCRGEGRLLCS 175
           KE+G  E +V   RVFLLGENRWE+ SRL+GR+K+ GG+   D TT+C++CRGEGRL+C+
Sbjct: 269 KEEGFTEVEVSQQRVFLLGENRWEEPSRLVGRDKKGGGNKPKDATTKCLTCRGEGRLMCT 328

Query: 174 ECDGTGEPNIEEQFMEWVDEGAKCPYCNGIGFEICDVCNGK 52
           ECDGTGEPNIE QF++WVDEG KCPYC G+G  ICD C GK
Sbjct: 329 ECDGTGEPNIEPQFLDWVDEGVKCPYCEGLGHTICDACEGK 369


>emb|CBI33363.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  155 bits (393), Expect = 2e-36
 Identities = 67/101 (66%), Positives = 82/101 (81%), Gaps = 1/101 (0%)
 Frame = -3

Query: 351 KEKGVAESKVPHNRVFLLGENRWEDSSRLIGRNKQDGGSINTD-TTRCISCRGEGRLLCS 175
           KE+G  E +V   RVFLLGENRWE+ SRL+GR+K+ GG+   D TT+C++CRGEGRL+C+
Sbjct: 135 KEEGFTEVEVSQQRVFLLGENRWEEPSRLVGRDKKGGGNKPKDATTKCLTCRGEGRLMCT 194

Query: 174 ECDGTGEPNIEEQFMEWVDEGAKCPYCNGIGFEICDVCNGK 52
           ECDGTGEPNIE QF++WVDEG KCPYC G+G  ICD C GK
Sbjct: 195 ECDGTGEPNIEPQFLDWVDEGVKCPYCEGLGHTICDACEGK 235


>ref|NP_193103.2| protein plastid transcriptionally active 5 [Arabidopsis thaliana]
           gi|119360137|gb|ABL66797.1| At4g13670 [Arabidopsis
           thaliana] gi|332657911|gb|AEE83311.1| protein plastid
           transcriptionally active 5 [Arabidopsis thaliana]
          Length = 387

 Score =  154 bits (390), Expect = 5e-36
 Identities = 71/102 (69%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
 Frame = -3

Query: 351 KEKGVAESKVPHNRVFLLGENRWEDSSRLIGRNKQDGGSINTDT-TRCISCRGEGRLLCS 175
           K++   E  V  NRVFLLGENRWED SRLIGRNK    S +T+T TRCI+CRGEGRL+C 
Sbjct: 284 KDQSDREVDVTQNRVFLLGENRWEDPSRLIGRNKPVDRSESTNTKTRCITCRGEGRLMCL 343

Query: 174 ECDGTGEPNIEEQFMEWVDEGAKCPYCNGIGFEICDVCNGKK 49
           ECDGTGEPNIE QFMEWV E  KCPYC G+G+ +CDVC+GKK
Sbjct: 344 ECDGTGEPNIEPQFMEWVGEDTKCPYCEGLGYTVCDVCDGKK 385


>emb|CAB36831.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268071|emb|CAB78409.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 432

 Score =  154 bits (390), Expect = 5e-36
 Identities = 71/102 (69%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
 Frame = -3

Query: 351 KEKGVAESKVPHNRVFLLGENRWEDSSRLIGRNKQDGGSINTDT-TRCISCRGEGRLLCS 175
           K++   E  V  NRVFLLGENRWED SRLIGRNK    S +T+T TRCI+CRGEGRL+C 
Sbjct: 329 KDQSDREVDVTQNRVFLLGENRWEDPSRLIGRNKPVDRSESTNTKTRCITCRGEGRLMCL 388

Query: 174 ECDGTGEPNIEEQFMEWVDEGAKCPYCNGIGFEICDVCNGKK 49
           ECDGTGEPNIE QFMEWV E  KCPYC G+G+ +CDVC+GKK
Sbjct: 389 ECDGTGEPNIEPQFMEWVGEDTKCPYCEGLGYTVCDVCDGKK 430


>ref|XP_002870363.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316199|gb|EFH46622.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score =  153 bits (387), Expect = 1e-35
 Identities = 70/102 (68%), Positives = 80/102 (78%), Gaps = 1/102 (0%)
 Frame = -3

Query: 351 KEKGVAESKVPHNRVFLLGENRWEDSSRLIGRNKQDGGSINTDT-TRCISCRGEGRLLCS 175
           K++   E  V  NRV+LLGENRWED SRLIGRNK    S +T T TRCI+CRGEGRL+C 
Sbjct: 291 KDQSNREDDVTQNRVYLLGENRWEDPSRLIGRNKPVDSSKSTITKTRCITCRGEGRLMCL 350

Query: 174 ECDGTGEPNIEEQFMEWVDEGAKCPYCNGIGFEICDVCNGKK 49
           ECDGTGEPNIE QFMEWV E  KCPYC G+G+ +CDVC+GKK
Sbjct: 351 ECDGTGEPNIEPQFMEWVGEDTKCPYCEGLGYTVCDVCDGKK 392


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