BLASTX nr result

ID: Cnidium21_contig00019964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019964
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143861.1| PREDICTED: RING-H2 zinc finger protein RHA4a...    72   5e-11
ref|XP_002297966.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a...    67   2e-09
ref|XP_002518854.1| ring finger protein, putative [Ricinus commu...    65   8e-09
ref|XP_002304565.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09

>ref|XP_004143861.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Cucumis sativus]
           gi|449532338|ref|XP_004173139.1| PREDICTED: RING-H2 zinc
           finger protein RHA4a-like [Cucumis sativus]
          Length = 196

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/55 (56%), Positives = 39/55 (70%)
 Frame = -2

Query: 321 QVPSCKHVFHRDCIRNWLRSNTTCPLCRCLVFVVDKTKLVPSAPQTSPALLPPTP 157
           QVPSCKHVFH DC+ +WL SN+TCPLCRC V        +P+   + PA++PPTP
Sbjct: 125 QVPSCKHVFHIDCMNHWLISNSTCPLCRCSV--------IPTTQCSDPAVVPPTP 171


>ref|XP_002297966.1| predicted protein [Populus trichocarpa] gi|222845224|gb|EEE82771.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = -2

Query: 321 QVPSCKHVFHRDCIRNWLRSNTTCPLCRCLVFVVDKTKLVPSAPQTS-PALLP 166
           Q+PSCKHVFH DCI +WL SN+TCPLCRC V +   TK   S  Q+S P +LP
Sbjct: 167 QIPSCKHVFHIDCIHHWLHSNSTCPLCRCYV-IFPTTKFCTSPLQSSGPMILP 218


>ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a [Vitis vinifera]
           gi|297742383|emb|CBI34532.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -2

Query: 321 QVPSCKHVFHRDCIRNWLRSNTTCPLCRCLVF 226
           QVPSCKHVFH DCI +WLR+N+TCPLCRC VF
Sbjct: 118 QVPSCKHVFHADCIYHWLRTNSTCPLCRCSVF 149


>ref|XP_002518854.1| ring finger protein, putative [Ricinus communis]
           gi|223541841|gb|EEF43387.1| ring finger protein,
           putative [Ricinus communis]
          Length = 265

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/53 (54%), Positives = 34/53 (64%)
 Frame = -2

Query: 321 QVPSCKHVFHRDCIRNWLRSNTTCPLCRCLVFVVDKTKLVPSAPQTSPALLPP 163
           Q+PSCKHVFH +CI +WL SNTTCPLCR  V ++  TKL        P   PP
Sbjct: 119 QIPSCKHVFHIECIHHWLHSNTTCPLCRSFV-IIPTTKLDNQDQSGGPDTSPP 170


>ref|XP_002304565.1| predicted protein [Populus trichocarpa] gi|222841997|gb|EEE79544.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
 Frame = -2

Query: 321 QVPSCKHVFHRDCIRNWLRSNTTCPLCRCLVFVVDKTKLVPSAPQTS-PALL 169
           Q+PSCKHVFH DCI +WL SN+TCPLCRC V +        + PQ+S P LL
Sbjct: 116 QIPSCKHVFHIDCIHHWLHSNSTCPLCRCYV-IFPANIFCTNPPQSSGPVLL 166


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