BLASTX nr result
ID: Cnidium21_contig00019963
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00019963 (1110 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003533500.1| PREDICTED: structure-specific endonuclease s... 194 4e-47 ref|XP_002271242.1| PREDICTED: structure-specific endonuclease s... 192 2e-46 ref|XP_002298410.1| predicted protein [Populus trichocarpa] gi|2... 187 5e-45 ref|XP_002298387.1| predicted protein [Populus trichocarpa] gi|2... 183 6e-44 ref|XP_002298390.1| predicted protein [Populus trichocarpa] gi|2... 182 2e-43 >ref|XP_003533500.1| PREDICTED: structure-specific endonuclease subunit slx1-like [Glycine max] Length = 172 Score = 194 bits (492), Expect = 4e-47 Identities = 96/161 (59%), Positives = 111/161 (68%) Frame = +3 Query: 36 VRRPVSQTLRSIKPHNTKSEAAVVSSSHNSGPLISSSWCVYLILSTNVPIKTYVGVTNNF 215 ++RP S S TKSE + S SW VYLILSTN PIKTYVG+TNNF Sbjct: 11 IKRPNSNPKLSKSSSPTKSEIKFNAKPKPKSESESESWSVYLILSTNHPIKTYVGITNNF 70 Query: 216 SRRLKQHNGELKGGAKASRAGRPWVCACLIQGFMDKSKACAFESKWKICSRKLPRKEKLQ 395 RRLKQHNGELKGGAKASRAGRPW+CAC+I GF D+S+A FESKWK SR+ PRK + Sbjct: 71 PRRLKQHNGELKGGAKASRAGRPWICACIICGFTDRSEASVFESKWKTFSRRAPRKNQND 130 Query: 396 RQDQQIESDPLPLLRRRHTALDRVKGLIDCSHLEIVWKHDP 518 +Q E LPLLR R AL+RVKG +DC+HLEI+W DP Sbjct: 131 NLSKQSEDSSLPLLRHRQAALNRVKGSLDCAHLEIIWHLDP 171 >ref|XP_002271242.1| PREDICTED: structure-specific endonuclease subunit slx1 [Vitis vinifera] gi|296085104|emb|CBI28599.3| unnamed protein product [Vitis vinifera] Length = 160 Score = 192 bits (487), Expect = 2e-46 Identities = 106/166 (63%), Positives = 120/166 (72%), Gaps = 3/166 (1%) Frame = +3 Query: 33 MVRRPVSQTLRSIKPHNTKSEAAVVSSSHNSGPLISS-SWCVYLILSTNVPIKTYVGVTN 209 MVR +S+ RSIK N SS +S SS SW VYLILSTN PIKTYVGVT Sbjct: 1 MVR--ISKIFRSIKCSNPNPNPDPSKSSPSSSRSRSSFSWLVYLILSTNTPIKTYVGVTT 58 Query: 210 NFSRRLKQHNGELKGGAKASRAGRPWVCACLIQGFMDKSKACAFESKWKICSRKLPRKEK 389 NFSRRLKQHNGELKGGAKASR GRPWVCAC+IQGF DKS+AC FESKWK SRKLPRK Sbjct: 59 NFSRRLKQHNGELKGGAKASRTGRPWVCACIIQGFKDKSEACQFESKWKSFSRKLPRK-- 116 Query: 390 LQRQD--QQIESDPLPLLRRRHTALDRVKGLIDCSHLEIVWKHDPS 521 R D +Q+++D L LL+ R AL+RVKG + C HLEI W+ +PS Sbjct: 117 --RNDTVRQVDNDSLLLLQHREAALNRVKGSLVCDHLEINWQLNPS 160 >ref|XP_002298410.1| predicted protein [Populus trichocarpa] gi|222845668|gb|EEE83215.1| predicted protein [Populus trichocarpa] Length = 177 Score = 187 bits (474), Expect = 5e-45 Identities = 99/145 (68%), Positives = 108/145 (74%) Frame = +3 Query: 75 PHNTKSEAAVVSSSHNSGPLISSSWCVYLILSTNVPIKTYVGVTNNFSRRLKQHNGELKG 254 P + K+ A SS NS S SW VYLILSTN PIKTYVGVT NFSRRLKQHNGELKG Sbjct: 35 PRSRKTRA---KSSSNSK---SRSWSVYLILSTNRPIKTYVGVTTNFSRRLKQHNGELKG 88 Query: 255 GAKASRAGRPWVCACLIQGFMDKSKACAFESKWKICSRKLPRKEKLQRQDQQIESDPLPL 434 GAKASRAGRPW+CAC+I+GF D+S+AC FESKWKI SRKLPRK Q +Q D L Sbjct: 89 GAKASRAGRPWICACIIRGFNDRSEACKFESKWKIFSRKLPRKRIDDDQMKQSSKDSHRL 148 Query: 435 LRRRHTALDRVKGLIDCSHLEIVWK 509 L+ R TALDRVKG D SHLEI WK Sbjct: 149 LQHRKTALDRVKGSFDLSHLEIDWK 173 >ref|XP_002298387.1| predicted protein [Populus trichocarpa] gi|222845645|gb|EEE83192.1| predicted protein [Populus trichocarpa] Length = 178 Score = 183 bits (465), Expect = 6e-44 Identities = 104/178 (58%), Positives = 115/178 (64%), Gaps = 22/178 (12%) Frame = +3 Query: 42 RPVSQTLRSIK----------------------PHNTKSEAAVVSSSHNSGPLISSSWCV 155 R +SQT RS+K P + K+ A SS NS S SW V Sbjct: 3 RLLSQTFRSVKLKASSSKPPPPQQQQPSSSSSLPRSRKTRA---KSSSNSK---SRSWSV 56 Query: 156 YLILSTNVPIKTYVGVTNNFSRRLKQHNGELKGGAKASRAGRPWVCACLIQGFMDKSKAC 335 YLILSTN PIKTYVGVT NFSRRLKQHNGELKGGAKASRAGRPW+CAC+I+GF D+S+AC Sbjct: 57 YLILSTNHPIKTYVGVTTNFSRRLKQHNGELKGGAKASRAGRPWICACIIRGFNDRSEAC 116 Query: 336 AFESKWKICSRKLPRKEKLQRQDQQIESDPLPLLRRRHTALDRVKGLIDCSHLEIVWK 509 FESKWK SRK PRK Q +Q D LL+ R TALDRVKG D SHLEI WK Sbjct: 117 KFESKWKSFSRKFPRKRIDDDQMKQSRKDSHRLLQHRKTALDRVKGSFDLSHLEIDWK 174 >ref|XP_002298390.1| predicted protein [Populus trichocarpa] gi|222845648|gb|EEE83195.1| predicted protein [Populus trichocarpa] Length = 178 Score = 182 bits (461), Expect = 2e-43 Identities = 103/178 (57%), Positives = 115/178 (64%), Gaps = 22/178 (12%) Frame = +3 Query: 42 RPVSQTLRSIK----------------------PHNTKSEAAVVSSSHNSGPLISSSWCV 155 R +SQT RS+K P + K+ A SS NS S SW V Sbjct: 3 RLLSQTFRSVKLKASSSKPPPPQQQQPSSSSSLPRSRKTRA---KSSSNSK---SRSWSV 56 Query: 156 YLILSTNVPIKTYVGVTNNFSRRLKQHNGELKGGAKASRAGRPWVCACLIQGFMDKSKAC 335 YLILSTN PIKTYVGVT NFSRRLKQHNG+LKGGAKASRAGRPW+CAC+I+GF D+S+AC Sbjct: 57 YLILSTNHPIKTYVGVTTNFSRRLKQHNGKLKGGAKASRAGRPWICACIIRGFNDRSEAC 116 Query: 336 AFESKWKICSRKLPRKEKLQRQDQQIESDPLPLLRRRHTALDRVKGLIDCSHLEIVWK 509 FESKWK SRK PRK Q +Q D LL+ R TALDRVKG D SHLEI WK Sbjct: 117 KFESKWKSFSRKFPRKRIDDDQMKQSRKDSHRLLQHRKTALDRVKGSFDLSHLEIDWK 174