BLASTX nr result

ID: Cnidium21_contig00019960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019960
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24611.3| unnamed protein product [Vitis vinifera]               73   3e-11
emb|CAN79130.1| hypothetical protein VITISV_029207 [Vitis vinifera]    73   3e-11
ref|XP_002521092.1| serine-threonine protein kinase, plant-type,...    72   5e-11
ref|XP_002263565.2| PREDICTED: LRR receptor-like serine/threonin...    71   1e-10
ref|XP_002268910.2| PREDICTED: LRR receptor-like serine/threonin...    70   2e-10

>emb|CBI24611.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/111 (40%), Positives = 69/111 (62%), Gaps = 4/111 (3%)
 Frame = -3

Query: 324 NLSRSMTLLNISSNKIRG---KISWNYISIPEIDLSSNYFNGPVPSISPGCFRINLSQNK 154
           NL+ ++  LNIS+N+IRG    +S  + + P+ID+SSN F G +P +     R++LS NK
Sbjct: 194 NLTSNINTLNISNNQIRGVLPNLSSQFGTYPDIDISSNSFEGSIPQLPSTVTRLDLSNNK 253

Query: 153 FSGTL-LLPVEQISFSDFVTSLTFLDVSHNQLFGALPDSLIRFQRLVFLNL 4
            SG++ LL +   S+      L +LD+S+N L GALP+   ++  LV LNL
Sbjct: 254 LSGSISLLCIVANSY------LVYLDLSNNSLTGALPNCWPQWASLVVLNL 298


>emb|CAN79130.1| hypothetical protein VITISV_029207 [Vitis vinifera]
          Length = 1107

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/111 (40%), Positives = 69/111 (62%), Gaps = 4/111 (3%)
 Frame = -3

Query: 324 NLSRSMTLLNISSNKIRG---KISWNYISIPEIDLSSNYFNGPVPSISPGCFRINLSQNK 154
           NL+ ++  LNIS+N+IRG    +S  + + P+ID+SSN F G +P +     R++LS NK
Sbjct: 646 NLTSNINTLNISNNQIRGVLPNLSSQFGTYPDIDISSNSFEGSIPQLPSTVTRLDLSNNK 705

Query: 153 FSGTL-LLPVEQISFSDFVTSLTFLDVSHNQLFGALPDSLIRFQRLVFLNL 4
            SG++ LL +   S+      L +LD+S+N L GALP+   ++  LV LNL
Sbjct: 706 LSGSISLLCIVANSY------LVYLDLSNNSLTGALPNCWPQWASLVVLNL 750


>ref|XP_002521092.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223539661|gb|EEF41243.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 1010

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
 Frame = -3

Query: 324 NLSRSMTLLNISSNKIRGKI---SWNYISIPEIDLSSNYFNGPVPSISPGCFRINLSQNK 154
           N S  +  LN+S N + GK+   S  + ++P +DLSSN F G +PS       +NLS+N 
Sbjct: 538 NFSSKIRYLNLSFNHLYGKVPNQSAEFYTLPSVDLSSNLFYGTIPSFLSNTSVLNLSKNA 597

Query: 153 FSGTLLLPVEQISFSDFVTSLTFLDVSHNQLFGALPDSLIRFQRLVFLN 7
           F+G+L      +      + +T+LD+S N L G LPD   +F++LV LN
Sbjct: 598 FTGSLSFLCTVMD-----SGMTYLDLSDNSLSGGLPDCWAQFKQLVILN 641


>ref|XP_002263565.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           GSO1-like [Vitis vinifera]
          Length = 1024

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
 Frame = -3

Query: 324 NLSRSMTLLNISSNKIRGKI--SWNYISIPEIDLSSNYFNGPVPSISPGCFRINLSQNKF 151
           N+S ++  LN+S N+++G++  S N+  + EID SSN F GP+P    G   ++LS NKF
Sbjct: 543 NISLNLQRLNLSHNQLQGQLPNSLNFYGLSEIDFSSNLFEGPIPFSIKGVDILDLSYNKF 602

Query: 150 SGTLLLPVEQISFSDFVTSLTFLDVSHNQLFGALPDSLIRFQRL 19
            G +       +  +F+ SL FL +S N++ G +PDS+ R   L
Sbjct: 603 YGAI-----PSNIGEFLPSLQFLSLSGNRITGTIPDSIGRITNL 641


>ref|XP_002268910.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            GSO2-like [Vitis vinifera]
          Length = 1198

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/110 (36%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
 Frame = -3

Query: 324  NLSRSMTLLNISSNKIRGKIS---WNYISIPEIDLSSNYFNGPVPSISPGCFRINLSQNK 154
            N++ +++ L+IS+N+I+G +     N+ S+  ID+SSNYF G +P +      ++LS NK
Sbjct: 725  NVTSTISTLSISNNRIKGTLQNLPLNFGSLSNIDMSSNYFEGLIPQLPSDVRWLDLSNNK 784

Query: 153  FSGTLLLPVEQISFSDFVTSLTFLDVSHNQLFGALPDSLIRFQRLVFLNL 4
             SG++ L    ++       L  LD+S+N L G LP+   +++RLV LNL
Sbjct: 785  LSGSISLLCAVVN-----PPLVLLDLSNNSLTGGLPNCWAQWERLVVLNL 829


Top