BLASTX nr result

ID: Cnidium21_contig00019918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019918
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275808.1| PREDICTED: phosphomevalonate kinase [Vitis v...    92   4e-17
emb|CAN70293.1| hypothetical protein VITISV_005973 [Vitis vinifera]    92   4e-17
ref|XP_003602220.1| Phosphomevalonate kinase [Medicago truncatul...    88   6e-16
ref|XP_002326557.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_002520206.1| ATP binding protein, putative [Ricinus commu...    87   1e-15

>ref|XP_002275808.1| PREDICTED: phosphomevalonate kinase [Vitis vinifera]
           gi|297742018|emb|CBI33805.3| unnamed protein product
           [Vitis vinifera]
          Length = 508

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/60 (75%), Positives = 54/60 (90%)
 Frame = +3

Query: 48  FDAVFAVTLGDASSTNLTKTWSSHNVLAMLVREDPRGVSLESNDPRAREITSAFSAVHVE 227
           FDA+FAVTLGD+SS N+TK W+S NVLAMLVREDP GVSLE+ DPRA++ITSA S+VH+E
Sbjct: 450 FDAIFAVTLGDSSS-NITKAWTSLNVLAMLVREDPHGVSLETGDPRAQQITSAISSVHIE 508


>emb|CAN70293.1| hypothetical protein VITISV_005973 [Vitis vinifera]
          Length = 613

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/60 (75%), Positives = 54/60 (90%)
 Frame = +3

Query: 48  FDAVFAVTLGDASSTNLTKTWSSHNVLAMLVREDPRGVSLESNDPRAREITSAFSAVHVE 227
           FDA+FAVTLGD+SS N+TK W+S NVLAMLVREDP GVSLE+ DPRA++ITSA S+VH+E
Sbjct: 555 FDAIFAVTLGDSSS-NITKAWTSLNVLAMLVREDPHGVSLETGDPRAQQITSAISSVHIE 613


>ref|XP_003602220.1| Phosphomevalonate kinase [Medicago truncatula]
           gi|355491268|gb|AES72471.1| Phosphomevalonate kinase
           [Medicago truncatula]
          Length = 508

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/60 (73%), Positives = 53/60 (88%)
 Frame = +3

Query: 48  FDAVFAVTLGDASSTNLTKTWSSHNVLAMLVREDPRGVSLESNDPRAREITSAFSAVHVE 227
           +DAVFAVTLGD++S N+TKTWSS NVLAMLV+EDP GVSLES DPR  EITSA S++H++
Sbjct: 450 YDAVFAVTLGDSNS-NVTKTWSSLNVLAMLVKEDPCGVSLESADPRTNEITSAVSSIHID 508


>ref|XP_002326557.1| predicted protein [Populus trichocarpa] gi|222833879|gb|EEE72356.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/60 (73%), Positives = 51/60 (85%)
 Frame = +3

Query: 48  FDAVFAVTLGDASSTNLTKTWSSHNVLAMLVREDPRGVSLESNDPRAREITSAFSAVHVE 227
           FDAVFA+TLGD+ S N+TK WSS NVLA+LVREDP GVSLE+ DPR +EITSA SAV +E
Sbjct: 437 FDAVFAITLGDSGS-NVTKAWSSLNVLALLVREDPHGVSLETGDPRTKEITSAVSAVQIE 495


>ref|XP_002520206.1| ATP binding protein, putative [Ricinus communis]
           gi|223540698|gb|EEF42261.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 503

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/57 (77%), Positives = 50/57 (87%)
 Frame = +3

Query: 48  FDAVFAVTLGDASSTNLTKTWSSHNVLAMLVREDPRGVSLESNDPRAREITSAFSAV 218
           +DAVFA+TLGD+SS NLTK WSS NVLA+LVREDP GVSLES DPR +EITSA +AV
Sbjct: 446 YDAVFAITLGDSSS-NLTKAWSSRNVLALLVREDPHGVSLESGDPRTKEITSAVAAV 501


Top