BLASTX nr result

ID: Cnidium21_contig00019890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019890
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15429.3| unnamed protein product [Vitis vinifera]              360   5e-97
ref|XP_002275254.1| PREDICTED: peptidyl-tRNA hydrolase, chloropl...   351   2e-94
ref|XP_002511963.1| peptidyl-tRNA hydrolase, putative [Ricinus c...   347   4e-93
ref|XP_002317938.1| predicted protein [Populus trichocarpa] gi|2...   346   7e-93
ref|XP_004157420.1| PREDICTED: peptidyl-tRNA hydrolase, chloropl...   343   3e-92

>emb|CBI15429.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  360 bits (923), Expect = 5e-97
 Identities = 184/248 (74%), Positives = 210/248 (84%)
 Frame = +3

Query: 9   GCNSSAFAAALLRFPETHRRISTTFMSNSLYSTTCKTTGEAAPAPAEVNTPVKKPKPWLI 188
           G  SS+ AA  LRFP   R +S  F S +L   +  +T      P  +++  +  KPWL+
Sbjct: 66  GSLSSSIAA--LRFPNWPRSLS--FSSRTLIPFSSLST------PTPMDSSPRPVKPWLL 115

Query: 189 VGLGNPGKKYNGTRHNVGFEMVDAIAESEGISMSAVSFKSLYGKGLIGNVPVMLAKPQTF 368
           VGLGNPGKKYNGTRHNVGFEMVDAIAE+EGIS+S+VSFKSL+GKG IGNVPVMLAKPQTF
Sbjct: 116 VGLGNPGKKYNGTRHNVGFEMVDAIAEAEGISISSVSFKSLFGKGFIGNVPVMLAKPQTF 175

Query: 369 MNVSGESVGAIVSYYKIPAQQVLVIYDDLDLPFAKLRLLPKGGHGGHNGMKSIMSHLKGT 548
           MNVSGESVGAIVSYYKIP +QVLVI+DDLDLPF+KLRLLPKGGHGGHNGM+S++ H KG+
Sbjct: 176 MNVSGESVGAIVSYYKIPLKQVLVIFDDLDLPFSKLRLLPKGGHGGHNGMRSVIDHFKGS 235

Query: 549 RDFPRLRIGIGRPPGKMDPANFVLRPFSKKEREELDFTFQTGVEAMRILLLEGFNKSATF 728
           RDFPRLRIGIGRPPGKMD ANFVL PFSK+EREELDFTFQ GVEA+RILLLEGFNKSA+F
Sbjct: 236 RDFPRLRIGIGRPPGKMDTANFVLSPFSKREREELDFTFQNGVEAVRILLLEGFNKSASF 295

Query: 729 VNSPKTLE 752
           VN+ K+LE
Sbjct: 296 VNTAKSLE 303


>ref|XP_002275254.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Vitis
           vinifera]
          Length = 205

 Score =  351 bits (900), Expect = 2e-94
 Identities = 168/193 (87%), Positives = 185/193 (95%)
 Frame = +3

Query: 174 KPWLIVGLGNPGKKYNGTRHNVGFEMVDAIAESEGISMSAVSFKSLYGKGLIGNVPVMLA 353
           KPWL+VGLGNPGKKYNGTRHNVGFEMVDAIAE+EGIS+S+VSFKSL+GKG IGNVPVMLA
Sbjct: 9   KPWLLVGLGNPGKKYNGTRHNVGFEMVDAIAEAEGISISSVSFKSLFGKGFIGNVPVMLA 68

Query: 354 KPQTFMNVSGESVGAIVSYYKIPAQQVLVIYDDLDLPFAKLRLLPKGGHGGHNGMKSIMS 533
           KPQTFMNVSGESVGAIVSYYKIP +QVLVI+DDLDLPF+KLRLLPKGGHGGHNGM+S++ 
Sbjct: 69  KPQTFMNVSGESVGAIVSYYKIPLKQVLVIFDDLDLPFSKLRLLPKGGHGGHNGMRSVID 128

Query: 534 HLKGTRDFPRLRIGIGRPPGKMDPANFVLRPFSKKEREELDFTFQTGVEAMRILLLEGFN 713
           H KG+RDFPRLRIGIGRPPGKMD ANFVL PFSK+EREELDFTFQ GVEA+RILLLEGFN
Sbjct: 129 HFKGSRDFPRLRIGIGRPPGKMDTANFVLSPFSKREREELDFTFQNGVEAVRILLLEGFN 188

Query: 714 KSATFVNSPKTLE 752
           KSA+FVN+ K+LE
Sbjct: 189 KSASFVNTAKSLE 201


>ref|XP_002511963.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
           gi|223549143|gb|EEF50632.1| peptidyl-tRNA hydrolase,
           putative [Ricinus communis]
          Length = 272

 Score =  347 bits (889), Expect = 4e-93
 Identities = 167/212 (78%), Positives = 189/212 (89%)
 Frame = +3

Query: 117 TTGEAAPAPAEVNTPVKKPKPWLIVGLGNPGKKYNGTRHNVGFEMVDAIAESEGISMSAV 296
           +T E + A A  ++ +   KPWLIVGLGNPGKKY  TRHNVGFEMVDA+A+SEGI +S+V
Sbjct: 58  STAENSSATATTSSTLSVKKPWLIVGLGNPGKKYQSTRHNVGFEMVDAVADSEGIPLSSV 117

Query: 297 SFKSLYGKGLIGNVPVMLAKPQTFMNVSGESVGAIVSYYKIPAQQVLVIYDDLDLPFAKL 476
           SFK+L GKG IGNVPVMLAKPQTFMN SGESVGAIVSYYKIP +QVL+IYDDLDLPFAKL
Sbjct: 118 SFKALLGKGYIGNVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLLIYDDLDLPFAKL 177

Query: 477 RLLPKGGHGGHNGMKSIMSHLKGTRDFPRLRIGIGRPPGKMDPANFVLRPFSKKEREELD 656
           RLLPKGGHGGHNGM+S++ H KG+RDFPRLRIGIGRPPGKMD ANFVLRPFS++E EELD
Sbjct: 178 RLLPKGGHGGHNGMRSVIDHFKGSRDFPRLRIGIGRPPGKMDSANFVLRPFSRQEHEELD 237

Query: 657 FTFQTGVEAMRILLLEGFNKSATFVNSPKTLE 752
           FTFQ G+EA+RILLLEGFNKSATFVNS K++E
Sbjct: 238 FTFQQGLEAIRILLLEGFNKSATFVNSAKSME 269


>ref|XP_002317938.1| predicted protein [Populus trichocarpa] gi|222858611|gb|EEE96158.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score =  346 bits (887), Expect = 7e-93
 Identities = 172/238 (72%), Positives = 199/238 (83%)
 Frame = +3

Query: 48  FPETHRRISTTFMSNSLYSTTCKTTGEAAPAPAEVNTPVKKPKPWLIVGLGNPGKKYNGT 227
           FP  H  I ++  S++  STT + + +A  A        K+  PWLIVGLGNPGKKY+ T
Sbjct: 40  FPH-HFPILSSSSSSASISTTTEDSSDAVAAAKP-----KQQHPWLIVGLGNPGKKYHST 93

Query: 228 RHNVGFEMVDAIAESEGISMSAVSFKSLYGKGLIGNVPVMLAKPQTFMNVSGESVGAIVS 407
           RHNVGF+MVDA+A++EGIS+S VSFK+L+GKG IGNVPVM AKPQTFMN SGESVGAIVS
Sbjct: 94  RHNVGFQMVDALADAEGISISGVSFKALFGKGFIGNVPVMFAKPQTFMNASGESVGAIVS 153

Query: 408 YYKIPAQQVLVIYDDLDLPFAKLRLLPKGGHGGHNGMKSIMSHLKGTRDFPRLRIGIGRP 587
           YYKIP +QVL+IYDDLDLPFAKLRLLPKGGHGGHNGMKS+++H KG RDFPRLRIGIGRP
Sbjct: 154 YYKIPLKQVLLIYDDLDLPFAKLRLLPKGGHGGHNGMKSVINHFKGNRDFPRLRIGIGRP 213

Query: 588 PGKMDPANFVLRPFSKKEREELDFTFQTGVEAMRILLLEGFNKSATFVNSPKTLEHLG 761
           PGKMD ANFVLRPF+K+E EELDF FQ G+EA+RILLLEG NKSATFVNS K++E LG
Sbjct: 214 PGKMDTANFVLRPFTKQEHEELDFMFQQGIEAVRILLLEGLNKSATFVNSTKSMEQLG 271


>ref|XP_004157420.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Cucumis
           sativus]
          Length = 273

 Score =  343 bits (881), Expect = 3e-92
 Identities = 175/241 (72%), Positives = 199/241 (82%)
 Frame = +3

Query: 36  ALLRFPETHRRISTTFMSNSLYSTTCKTTGEAAPAPAEVNTPVKKPKPWLIVGLGNPGKK 215
           +LL  P  H   S T    +  ST+   T E  PA  +   P   PKPWLIVGLGNPGKK
Sbjct: 34  SLLHSPTFHIFSSITSSITASMSTSSSPTTEQ-PA-LDDKKPAPPPKPWLIVGLGNPGKK 91

Query: 216 YNGTRHNVGFEMVDAIAESEGISMSAVSFKSLYGKGLIGNVPVMLAKPQTFMNVSGESVG 395
           Y+ TRHNVGFEMVDA+AE+EGIS+S VSFK+L GKG IG+VPVMLAKPQTFMN SGESVG
Sbjct: 92  YDRTRHNVGFEMVDAVAEAEGISISNVSFKALIGKGFIGDVPVMLAKPQTFMNASGESVG 151

Query: 396 AIVSYYKIPAQQVLVIYDDLDLPFAKLRLLPKGGHGGHNGMKSIMSHLKGTRDFPRLRIG 575
           AIVSYYKIP +QVLVI+DDLDLPFAKLR+LPKGGHGGHNGM+SI+ H KG+RDFPRLRIG
Sbjct: 152 AIVSYYKIPLKQVLVIFDDLDLPFAKLRMLPKGGHGGHNGMRSIIDHFKGSRDFPRLRIG 211

Query: 576 IGRPPGKMDPANFVLRPFSKKEREELDFTFQTGVEAMRILLLEGFNKSATFVNSPKTLEH 755
           IGRPPGKMD ANFVLRPF+K+EREEL+FT Q G +A+RILLLEGFNKSATFVN+ K+LE 
Sbjct: 212 IGRPPGKMDAANFVLRPFNKQEREELNFTLQVGEDAIRILLLEGFNKSATFVNTNKSLEQ 271

Query: 756 L 758
           +
Sbjct: 272 I 272


Top