BLASTX nr result

ID: Cnidium21_contig00019879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019879
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]         146   7e-33
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             140   4e-31
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         138   2e-30
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   137   3e-30
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   137   3e-30

>emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 544

 Score =  146 bits (368), Expect = 7e-33
 Identities = 75/168 (44%), Positives = 113/168 (67%), Gaps = 3/168 (1%)
 Frame = +3

Query: 15  YVSNKWYQELRFRSWKMANMMQP-NIPKLTSTNYGNWSIQMKVLLGSYDNWDIVENGYKE 191
           +   KWYQ L+    KMA+   P  +P LT +NY NWS++MK +LG++D W+IVE G+ E
Sbjct: 3   FTLTKWYQSLKIL--KMASNNVPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIE 60

Query: 192 PVYAAVESALSNAEKTVLKESRKKNNKAFFMIFQGVDESTFEKIAEAKMAKDAWENLQKS 371
           P     E +LS  +K  L++SRK++ KA  +I+QG+DE TFEK+ EA  AK+AWE L+ S
Sbjct: 61  PEN---EGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTS 117

Query: 372 FQEVEKVKKFQLQVLGGENK--EMKSSENIGENVTRLKTMTNEIRRNG 509
           ++  ++VKK +LQ L GE +  +MK  E + +  +R+ T+TN ++RNG
Sbjct: 118 YKGADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNG 165


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  140 bits (353), Expect = 4e-31
 Identities = 69/150 (46%), Positives = 105/150 (70%), Gaps = 2/150 (1%)
 Frame = +3

Query: 66  ANMMQPNIPKLTSTNYGNWSIQMKVLLGSYDNWDIVENGYKEPVYAAVESALSNAEKTVL 245
           +N +   +P LT +NY NWS+QMK +LG++D W+IVE G+ EP     E +LS  +K  L
Sbjct: 3   SNNVPFQVPVLTKSNYDNWSLQMKAILGAHDVWEIVEKGFIEPEN---EGSLSQTQKDGL 59

Query: 246 KESRKKNNKAFFMIFQGVDESTFEKIAEAKMAKDAWENLQKSFQEVEKVKKFQLQVLGGE 425
           ++SRK++ KA  +I+QG+DE TFEK+ EA  AK+AWE L+ S++ V++VKK +LQ L GE
Sbjct: 60  RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGVDQVKKVRLQTLRGE 119

Query: 426 NK--EMKSSENIGENVTRLKTMTNEIRRNG 509
            +  +MK  E + +  +R+ T+TN ++RNG
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNG 149


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  138 bits (347), Expect = 2e-30
 Identities = 82/238 (34%), Positives = 136/238 (57%), Gaps = 3/238 (1%)
 Frame = +3

Query: 66  ANMMQPNIPKLTSTNYGNWSIQMKVLLGSYDNWDIVENGYKEPVYAAVESALSNAEKTVL 245
           +N +   +P LT +NY NWS++MK +LG++D W+IVE G+ EP     E +LS  +K  L
Sbjct: 3   SNNVPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPEN---EGSLSQTQKDGL 59

Query: 246 KESRKKNNKAFFMIFQGVDESTFEKIAEAKMAKDAWENLQKSFQEVEKVKKFQLQVLGGE 425
           ++SRK++ KA  +I+QG+DE TFEK+ EA  AK+AWE L+ S++  ++VKK +LQ L GE
Sbjct: 60  RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGE 119

Query: 426 NK--EMKSSENIGENVTRLKTMTNEIRRNGFVQAHEMNQYDGDTCHLKKVLQNKVSINDN 599
            +  +MK  E + +  +R+ T+TN ++RNG        +   D   ++KVL++       
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNG--------EKLDDVRIMEKVLRS------- 164

Query: 600 PDTSSNNSGGAPRKMLSPDNIYEATSPVQT-TLNYSLFCLKANEESNKSREEVSHKIV 770
                        K      + E T  ++  T+   L  L+A EE  K +E+++ +++
Sbjct: 165 ----------LDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYEEKKKKKEDIAEQVL 212


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  137 bits (345), Expect = 3e-30
 Identities = 67/150 (44%), Positives = 104/150 (69%), Gaps = 2/150 (1%)
 Frame = +3

Query: 66  ANMMQPNIPKLTSTNYGNWSIQMKVLLGSYDNWDIVENGYKEPVYAAVESALSNAEKTVL 245
           +N +   +P LT +NY NWS++MK +LG++D W+IVE G+ EP     E +LS  +K  L
Sbjct: 3   SNNVPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPEN---EGSLSQTQKDGL 59

Query: 246 KESRKKNNKAFFMIFQGVDESTFEKIAEAKMAKDAWENLQKSFQEVEKVKKFQLQVLGGE 425
           ++SRK++ KA  +I+QG+DE TFEK+ EA  AK+AWE L+ S++  ++VKK +LQ L GE
Sbjct: 60  RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGE 119

Query: 426 NK--EMKSSENIGENVTRLKTMTNEIRRNG 509
            +  +MK  E + +  +R+ T+TN ++RNG
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNG 149


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  137 bits (345), Expect = 3e-30
 Identities = 67/150 (44%), Positives = 104/150 (69%), Gaps = 2/150 (1%)
 Frame = +3

Query: 66  ANMMQPNIPKLTSTNYGNWSIQMKVLLGSYDNWDIVENGYKEPVYAAVESALSNAEKTVL 245
           +N +   +P LT +NY NWS++MK +LG++D W+IVE G+ EP     E +LS  +K  L
Sbjct: 3   SNNVPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPEN---EGSLSQTQKDGL 59

Query: 246 KESRKKNNKAFFMIFQGVDESTFEKIAEAKMAKDAWENLQKSFQEVEKVKKFQLQVLGGE 425
           ++SRK++ KA  +I+QG+DE TFEK+ EA  AK+AWE L+ S++  ++VKK +LQ L GE
Sbjct: 60  RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGE 119

Query: 426 NK--EMKSSENIGENVTRLKTMTNEIRRNG 509
            +  +MK  E + +  +R+ T+TN ++RNG
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNG 149


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