BLASTX nr result

ID: Cnidium21_contig00019861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019861
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis] gi...   252   5e-65
ref|XP_002884994.1| hypothetical protein ARALYDRAFT_478791 [Arab...   251   9e-65
ref|NP_974308.1| Root hair defective 3 GTP-binding protein RHD3 ...   248   1e-63
ref|NP_188003.1| Root hair defective 3 GTP-binding protein RHD3 ...   248   1e-63
ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   248   1e-63

>ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis] gi|223533215|gb|EEF34971.1|
            Protein SEY1, putative [Ricinus communis]
          Length = 813

 Score =  252 bits (644), Expect = 5e-65
 Identities = 125/182 (68%), Positives = 146/182 (80%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1    STWEEIPASKTLITPVQCKSLWRQFKTETEYTVTQAIAAQEASKRSNNWLPPPWAIVAMI 180
            STW+E+P+SKTLITPVQCKSLWRQFK ETEY+VTQAI+AQEA+KR+NNWLPPPWAIVA++
Sbjct: 632  STWDEVPSSKTLITPVQCKSLWRQFKAETEYSVTQAISAQEANKRNNNWLPPPWAIVALV 691

Query: 181  LLGFNEFMTLLRNPLWLLVIFVGYLLSKALWVQLDISGEFRNGALPALLSLSTKFLPTVM 360
            +LGFNEFMTLLRNPL+L  IFV +LL KALWVQLD+SGEFRNGALP L+SLSTKFLPT+M
Sbjct: 692  VLGFNEFMTLLRNPLYLGFIFVVFLLVKALWVQLDVSGEFRNGALPGLISLSTKFLPTIM 751

Query: 361  NLLKKLAEQGQVPTTNNNQRNPSLAAN--XXXXXXXXXXXXXXXXXXXXXNGTEYSSPAV 534
            NL+KKLAE+GQ P TN+ QRNP+LAA                        NGTE+SS + 
Sbjct: 752  NLIKKLAEEGQKPATNDPQRNPALAAKSFRNGVGSSDDMSTASSGVTSTENGTEFSSASK 811

Query: 535  HD 540
             D
Sbjct: 812  DD 813


>ref|XP_002884994.1| hypothetical protein ARALYDRAFT_478791 [Arabidopsis lyrata subsp.
            lyrata] gi|297330834|gb|EFH61253.1| hypothetical protein
            ARALYDRAFT_478791 [Arabidopsis lyrata subsp. lyrata]
          Length = 803

 Score =  251 bits (642), Expect = 9e-65
 Identities = 118/145 (81%), Positives = 134/145 (92%)
 Frame = +1

Query: 1    STWEEIPASKTLITPVQCKSLWRQFKTETEYTVTQAIAAQEASKRSNNWLPPPWAIVAMI 180
            STWE++   KTLITPVQCKSLWRQFK ETEYTVTQAI+AQEA++R+NNWLPPPWAI+A++
Sbjct: 628  STWEQVAPEKTLITPVQCKSLWRQFKNETEYTVTQAISAQEANRRNNNWLPPPWAILALV 687

Query: 181  LLGFNEFMTLLRNPLWLLVIFVGYLLSKALWVQLDISGEFRNGALPALLSLSTKFLPTVM 360
            +LGFNEFMTLLRNPLWLLV+FVGYL+SKALWVQL+ISGEFRNGALP LLSLSTKF+PTVM
Sbjct: 688  VLGFNEFMTLLRNPLWLLVLFVGYLISKALWVQLNISGEFRNGALPGLLSLSTKFIPTVM 747

Query: 361  NLLKKLAEQGQVPTTNNNQRNPSLA 435
            NLLKKLAE+GQ P TN+NQ   S A
Sbjct: 748  NLLKKLAEEGQAPPTNSNQSMNSTA 772


>ref|NP_974308.1| Root hair defective 3 GTP-binding protein RHD3 [Arabidopsis
           thaliana] gi|332641907|gb|AEE75428.1| Root hair
           defective 3 GTP-binding protein RHD3 [Arabidopsis
           thaliana]
          Length = 738

 Score =  248 bits (632), Expect = 1e-63
 Identities = 116/145 (80%), Positives = 133/145 (91%)
 Frame = +1

Query: 1   STWEEIPASKTLITPVQCKSLWRQFKTETEYTVTQAIAAQEASKRSNNWLPPPWAIVAMI 180
           STWE++   KTLITPVQCKSLWRQFK ETEYTVTQAI+AQEA++R+NNWLPPPWAI+A++
Sbjct: 564 STWEKVAPEKTLITPVQCKSLWRQFKNETEYTVTQAISAQEANRRNNNWLPPPWAILALV 623

Query: 181 LLGFNEFMTLLRNPLWLLVIFVGYLLSKALWVQLDISGEFRNGALPALLSLSTKFLPTVM 360
           +LGFNEFMTLLRNPLWLLV+FVGYL+SKALWVQL+ISGEF+NG LP LLSLSTKF+PTVM
Sbjct: 624 VLGFNEFMTLLRNPLWLLVLFVGYLVSKALWVQLNISGEFQNGVLPGLLSLSTKFIPTVM 683

Query: 361 NLLKKLAEQGQVPTTNNNQRNPSLA 435
           NLLKKLAE+GQ P TN+NQ   S A
Sbjct: 684 NLLKKLAEEGQAPPTNSNQSMNSTA 708


>ref|NP_188003.1| Root hair defective 3 GTP-binding protein RHD3 [Arabidopsis thaliana]
            gi|75279781|sp|P93042.1|RHD3_ARATH RecName: Full=Protein
            ROOT HAIR DEFECTIVE 3; AltName: Full=Protein FRAGILE
            FIBER 4; AltName: Full=Protein SEY1 homolog 1
            gi|1839188|gb|AAB58375.1| root hair defective 3
            [Arabidopsis thaliana] gi|20260178|gb|AAM12987.1| unknown
            protein [Arabidopsis thaliana] gi|22136246|gb|AAM91201.1|
            unknown protein [Arabidopsis thaliana]
            gi|332641908|gb|AEE75429.1| Root hair defective 3
            GTP-binding protein RHD3 [Arabidopsis thaliana]
          Length = 802

 Score =  248 bits (632), Expect = 1e-63
 Identities = 116/145 (80%), Positives = 133/145 (91%)
 Frame = +1

Query: 1    STWEEIPASKTLITPVQCKSLWRQFKTETEYTVTQAIAAQEASKRSNNWLPPPWAIVAMI 180
            STWE++   KTLITPVQCKSLWRQFK ETEYTVTQAI+AQEA++R+NNWLPPPWAI+A++
Sbjct: 628  STWEKVAPEKTLITPVQCKSLWRQFKNETEYTVTQAISAQEANRRNNNWLPPPWAILALV 687

Query: 181  LLGFNEFMTLLRNPLWLLVIFVGYLLSKALWVQLDISGEFRNGALPALLSLSTKFLPTVM 360
            +LGFNEFMTLLRNPLWLLV+FVGYL+SKALWVQL+ISGEF+NG LP LLSLSTKF+PTVM
Sbjct: 688  VLGFNEFMTLLRNPLWLLVLFVGYLVSKALWVQLNISGEFQNGVLPGLLSLSTKFIPTVM 747

Query: 361  NLLKKLAEQGQVPTTNNNQRNPSLA 435
            NLLKKLAE+GQ P TN+NQ   S A
Sbjct: 748  NLLKKLAEEGQAPPTNSNQSMNSTA 772


>ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine max]
          Length = 808

 Score =  248 bits (632), Expect = 1e-63
 Identities = 120/180 (66%), Positives = 145/180 (80%)
 Frame = +1

Query: 1    STWEEIPASKTLITPVQCKSLWRQFKTETEYTVTQAIAAQEASKRSNNWLPPPWAIVAMI 180
            S+WE++ +SKTLITPVQCKSLWRQFKTETEY+V+QAI+AQEA+KR+NNWLPPPWAIVA++
Sbjct: 632  SSWEQVSSSKTLITPVQCKSLWRQFKTETEYSVSQAISAQEANKRNNNWLPPPWAIVALV 691

Query: 181  LLGFNEFMTLLRNPLWLLVIFVGYLLSKALWVQLDISGEFRNGALPALLSLSTKFLPTVM 360
            +LGFNEFMTLLRNPL+L VIFVG+LL KALWVQLD+SGEFRNGALP ++SLS+KF+PT+M
Sbjct: 692  ILGFNEFMTLLRNPLYLGVIFVGFLLIKALWVQLDVSGEFRNGALPGIISLSSKFIPTIM 751

Query: 361  NLLKKLAEQGQVPTTNNNQRNPSLAANXXXXXXXXXXXXXXXXXXXXXNGTEYSSPAVHD 540
            NL+KKLAE+GQ P  NN QR PS ++                      NGTEY+SP   D
Sbjct: 752  NLMKKLAEEGQNPAANNPQRTPSKSS---YNEGHAVSSSASSNLTRLDNGTEYASPLKDD 808


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