BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019846
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...   228   8e-60
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi...   204   6e-54
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi...   204   6e-54
ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containi...   195   1e-50
ref|XP_003615696.1| Pentatricopeptide repeat-containing protein ...   191   2e-50

>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Vitis vinifera]
          Length = 1545

 Score =  228 bits (582), Expect(2) = 8e-60
 Identities = 100/169 (59%), Positives = 137/169 (81%)
 Frame = -1

Query: 507 FFTL*WRRVFPDEFLFVKILHACGNCGDLRTAKVIHSIVVKCGMDVYVRVNNTMLAAYGK 328
           FF +    + PDEFL  KIL ACGNCGD  T K+IHS+V++CGM+  +RV+N++LA Y K
Sbjct: 173 FFFMMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAK 232

Query: 327 CGQLGCLKRYFRNMEGKDLVSWNSVISGYCRKGEIGEAHRLFEMMYDEGFEPGLVTWNTM 148
           CG+L C +R+F NM+ +D VSWNS+I+GYC+KGE+ ++H+LFE M +EG EPGLVTWN +
Sbjct: 233 CGRLSCARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNIL 292

Query: 147 ISTYNQLGKCDVALEMMKEMKSLGIIPDVFTWTSMVSGFAKSNGISKAL 1
           I++Y+Q GKCD A+E+MK+M+S  I+PDVFTWTSM+SGFA++N  S+AL
Sbjct: 293 INSYSQSGKCDDAMELMKKMESFRIVPDVFTWTSMISGFAQNNRRSQAL 341



 Score = 27.3 bits (59), Expect(2) = 8e-60
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -3

Query: 535 EKRWGEVVELFYAMMEEGV 479
           E+ W EVV+ F+ MME+G+
Sbjct: 163 EQMWREVVQHFFFMMEDGI 181



 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/151 (35%), Positives = 88/151 (58%), Gaps = 1/151 (0%)
 Frame = -1

Query: 450 LHACGNCGDLRTAKVIHSIVVKCGMDVYVRVNNTMLAAYGKCGQLGCLKRYFRNMEGKDL 271
           + AC +   L+    +HS+ VK G    + V N+++  Y K G+L   +R F  +  KD+
Sbjct: 363 ISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDV 422

Query: 270 VSWNSVISGYCRKGEIGEAHRLFEMMYDEGFEPGLVTWNTMISTYNQLGKCDVALEMMKE 91
            +WNS+I GYC+ G  G+A+ LF  M++    P +VTWN MIS Y Q G  D A+++   
Sbjct: 423 YTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHR 482

Query: 90  MKSLGIIP-DVFTWTSMVSGFAKSNGISKAL 1
           M+  G+I  D  +W S+++G+ ++   +KAL
Sbjct: 483 MEKDGLIKRDTASWNSLIAGYLQNGHKNKAL 513



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
 Frame = -1

Query: 477  PDEFLFVKILHACGNCGDLRTAKVIHSIVVKCGMDVYVRVNNTMLAAYGKCGQLGCLKRY 298
            P+    + IL AC N    +  K IH  +++  +   + V N ++  Y K G +   +  
Sbjct: 526  PNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTI 585

Query: 297  FRNMEGKDLVSWNSVISGYCRKGEIGEAHRLFEMMYDEGFEPGLVTWNTMISTYNQLGKC 118
            F+ +  KD++SWNS+I+GY   G    A  LF+ M   G +P   T+ ++I  ++  G  
Sbjct: 586  FQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMV 645

Query: 117  DVALEMMKE-MKSLGIIPDVFTWTSMVSGFAKSNGISKAL 1
            D   ++    M+   I+P +   ++M+    +S  + +A+
Sbjct: 646  DKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAI 685


>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Cucumis sativus]
          Length = 1463

 Score =  204 bits (520), Expect(2) = 6e-54
 Identities = 90/169 (53%), Positives = 133/169 (78%)
 Frame = -1

Query: 507 FFTL*WRRVFPDEFLFVKILHACGNCGDLRTAKVIHSIVVKCGMDVYVRVNNTMLAAYGK 328
           FF +    V PD FLF KIL ACGNC DL T K+IHS+V++CG+  Y+R++N++L A+ K
Sbjct: 168 FFLMMGDGVLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVK 227

Query: 327 CGQLGCLKRYFRNMEGKDLVSWNSVISGYCRKGEIGEAHRLFEMMYDEGFEPGLVTWNTM 148
           CG+L   +++F NM+ +D VSWN +I+GYC+KG   EA RL + M ++GF+PGLVT+N M
Sbjct: 228 CGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIM 287

Query: 147 ISTYNQLGKCDVALEMMKEMKSLGIIPDVFTWTSMVSGFAKSNGISKAL 1
           I++Y+QLG CD+ +++ K+M+S+G+ PDV+TWTSM+SGF++S+ IS+AL
Sbjct: 288 IASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQAL 336



 Score = 31.6 bits (70), Expect(2) = 6e-54
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = -3

Query: 535 EKRWGEVVELFYAMMEEGV 479
           E+RW EVVELF+ MM +GV
Sbjct: 158 EQRWKEVVELFFLMMGDGV 176



 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
 Frame = -1

Query: 483 VFPDEFLFVKILHACGNCGDLRTAKVIHSIVVKCGMDVYVRVNNTMLAAYGKCGQLGCLK 304
           V P+         AC +   L+    IH   +K G+     V N+++  Y KCG+L   +
Sbjct: 347 VEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAAR 406

Query: 303 RYFRNMEGKDLVSWNSVISGYCRKGEIGEAHRLFEMMYDEGFEPGLVTWNTMISTYNQLG 124
             F  +  KD+ +WNS+I GYC+ G  G+A+ LF  + +    P +VTWN MIS   Q G
Sbjct: 407 HVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNG 466

Query: 123 KCDVALEMMKEM-KSLGIIPDVFTWTSMVSGFAKSNGISKAL 1
             D A+++ + M K  G+  +  +W S+++G+ +    +KAL
Sbjct: 467 DEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKAL 508



 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
 Frame = -1

Query: 477  PDEFLFVKILHACGNCGDLRTAKVIHSIVVKCGMDVYVRVNNTMLAAYGKCGQLGCLKRY 298
            P+    + IL AC N    +  K IH  V++  ++  + V N+++  Y K G +   +  
Sbjct: 521  PNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTV 580

Query: 297  FRNMEGKDLVSWNSVISGYCRKGEIGEAHRLFEMMYDEGFEPGLVTWNTMISTYNQLGKC 118
            F  M  KD+++WNS+I+GY   G    A +LF+ M + G  P   T  ++I  Y   G  
Sbjct: 581  FNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMV 640

Query: 117  DVALEMMKEM-KSLGIIPDVFTWTSMVSGFAKSNGISKAL 1
            D    +   + +   I+P +  + +MV  + +S  ++ A+
Sbjct: 641  DKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAI 680


>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score =  204 bits (520), Expect(2) = 6e-54
 Identities = 90/169 (53%), Positives = 133/169 (78%)
 Frame = -1

Query: 507 FFTL*WRRVFPDEFLFVKILHACGNCGDLRTAKVIHSIVVKCGMDVYVRVNNTMLAAYGK 328
           FF +    V PD FLF KIL ACGNC DL T K+IHS+V++CG+  Y+R++N++L A+ K
Sbjct: 168 FFLMMGDGVLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVK 227

Query: 327 CGQLGCLKRYFRNMEGKDLVSWNSVISGYCRKGEIGEAHRLFEMMYDEGFEPGLVTWNTM 148
           CG+L   +++F NM+ +D VSWN +I+GYC+KG   EA RL + M ++GF+PGLVT+N M
Sbjct: 228 CGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIM 287

Query: 147 ISTYNQLGKCDVALEMMKEMKSLGIIPDVFTWTSMVSGFAKSNGISKAL 1
           I++Y+QLG CD+ +++ K+M+S+G+ PDV+TWTSM+SGF++S+ IS+AL
Sbjct: 288 IASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQAL 336



 Score = 31.6 bits (70), Expect(2) = 6e-54
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = -3

Query: 535 EKRWGEVVELFYAMMEEGV 479
           E+RW EVVELF+ MM +GV
Sbjct: 158 EQRWKEVVELFFLMMGDGV 176



 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
 Frame = -1

Query: 483 VFPDEFLFVKILHACGNCGDLRTAKVIHSIVVKCGMDVYVRVNNTMLAAYGKCGQLGCLK 304
           V P+         AC +   L+    IH   +K G+     V N+++  Y KCG+L   +
Sbjct: 347 VEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAAR 406

Query: 303 RYFRNMEGKDLVSWNSVISGYCRKGEIGEAHRLFEMMYDEGFEPGLVTWNTMISTYNQLG 124
             F  +  KD+ +WNS+I GYC+ G  G+A+ LF  + +    P +VTWN MIS   Q G
Sbjct: 407 HVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNG 466

Query: 123 KCDVALEMMKEM-KSLGIIPDVFTWTSMVSGFAKSNGISKAL 1
             D A+++ + M K  G+  +  +W S+++G+ +    +KAL
Sbjct: 467 DEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKAL 508



 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
 Frame = -1

Query: 477  PDEFLFVKILHACGNCGDLRTAKVIHSIVVKCGMDVYVRVNNTMLAAYGKCGQLGCLKRY 298
            P+    + IL AC N    +  K IH  V++  ++  + V N+++  Y K G +   +  
Sbjct: 521  PNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTV 580

Query: 297  FRNMEGKDLVSWNSVISGYCRKGEIGEAHRLFEMMYDEGFEPGLVTWNTMISTYNQLGKC 118
            F  M  KD+++WNS+I+GY   G    A +LF+ M + G  P   T  ++I  Y   G  
Sbjct: 581  FNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMV 640

Query: 117  DVALEMMKEM-KSLGIIPDVFTWTSMVSGFAKSNGISKAL 1
            D    +   + +   I+P +  + +MV  + +S  ++ A+
Sbjct: 641  DKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAI 680


>ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Glycine max]
          Length = 945

 Score =  195 bits (495), Expect(2) = 1e-50
 Identities = 82/168 (48%), Positives = 126/168 (75%)
 Frame = -1

Query: 507 FFTL*WRRVFPDEFLFVKILHACGNCGDLRTAKVIHSIVVKCGMDVYVRVNNTMLAAYGK 328
           F+ +    V PD+FL  K+L ACG   D+ T ++IHS+V++ GM   + VNN++LA Y K
Sbjct: 172 FYDMMQHGVLPDDFLLPKVLKACGKFRDIETGRLIHSLVIRGGMCSSLHVNNSILAVYAK 231

Query: 327 CGQLGCLKRYFRNMEGKDLVSWNSVISGYCRKGEIGEAHRLFEMMYDEGFEPGLVTWNTM 148
           CG++ C ++ FR M+ ++ VSWN +I+GYC++GEI +A + F+ M +EG EPGLVTWN +
Sbjct: 232 CGEMSCAEKIFRRMDERNCVSWNVIITGYCQRGEIEQAQKYFDAMQEEGMEPGLVTWNIL 291

Query: 147 ISTYNQLGKCDVALEMMKEMKSLGIIPDVFTWTSMVSGFAKSNGISKA 4
           I++Y+QLG CD+A+++M++M+S GI PDV+TWTSM+SGF +   I++A
Sbjct: 292 IASYSQLGHCDIAMDLMRKMESFGITPDVYTWTSMISGFTQKGRINEA 339



 Score = 30.0 bits (66), Expect(2) = 1e-50
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 529 RWGEVVELFYAMMEEGV 479
           +W EVVELFY MM+ GV
Sbjct: 164 KWEEVVELFYDMMQHGV 180



 Score =  107 bits (267), Expect = 1e-21
 Identities = 59/162 (36%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
 Frame = -1

Query: 483 VFPDEFLFVKILHACGNCGDLRTAKVIHSIVVKCGMDVYVRVNNTMLAAYGKCGQLGCLK 304
           V P+         AC +   L     IHSI VK  M   + + N+++  Y K G L   +
Sbjct: 351 VEPNSITIASAASACASVKSLSMGSEIHSIAVKTSMVDDILIGNSLIDMYAKGGDLEAAQ 410

Query: 303 RYFRNMEGKDLVSWNSVISGYCRKGEIGEAHRLFEMMYDEGFEPGLVTWNTMISTYNQLG 124
             F  M  +D+ SWNS+I GYC+ G  G+AH LF  M +    P +VTWN MI+ + Q G
Sbjct: 411 SIFDVMLERDVYSWNSIIGGYCQAGFCGKAHELFMKMQESDSPPNVVTWNVMITGFMQNG 470

Query: 123 KCDVALEMMKEMKSLG-IIPDVFTWTSMVSGFAKSNGISKAL 1
             D AL +   ++  G I P+V +W S++SGF ++    KAL
Sbjct: 471 DEDEALNLFLRIEKDGKIKPNVASWNSLISGFLQNRQKDKAL 512



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
 Frame = -1

Query: 477  PDEFLFVKILHACGNCGDLRTAKVIHSIVVKCGMDVYVRVNNTMLAAYGKCGQLGCLKRY 298
            P+    + IL AC N    +  K IH    +  +   + V+NT + +Y K G +   ++ 
Sbjct: 525  PNLVTVLTILPACTNLVAAKKVKEIHCCATRRNLVSELSVSNTFIDSYAKSGNIMYSRKV 584

Query: 297  FRNMEGKDLVSWNSVISGYCRKGEIGEAHRLFEMMYDEGFEPGLVTWNTMISTYNQLGKC 118
            F  +  KD++SWNS++SGY   G    A  LF+ M  +G  P  VT  ++IS Y+     
Sbjct: 585  FDGLSPKDIISWNSLLSGYVLHGCSESALDLFDQMRKDGLHPSRVTLTSIISAYSHAEMV 644

Query: 117  DVALEMMKEM-KSLGIIPDVFTWTSMVSGFAKSNGISKAL 1
            D        + +   I  D+  +++MV    +S  ++KAL
Sbjct: 645  DEGKHAFSNISEEYQIRLDLEHYSAMVYLLGRSGKLAKAL 684


>ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355517031|gb|AES98654.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  191 bits (484), Expect(2) = 2e-50
 Identities = 83/161 (51%), Positives = 118/161 (73%)
 Frame = -1

Query: 483 VFPDEFLFVKILHACGNCGDLRTAKVIHSIVVKCGMDVYVRVNNTMLAAYGKCGQLGCLK 304
           V PDEFL  K+L ACG C DL T ++IHS+V++ GM     + N+++A Y KCG++ C K
Sbjct: 179 VLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAK 238

Query: 303 RYFRNMEGKDLVSWNSVISGYCRKGEIGEAHRLFEMMYDEGFEPGLVTWNTMISTYNQLG 124
           + F  M+ +D V+WN++ISG+C+ GEIG+A + F+ M  +G EP LVTWN +IS YNQLG
Sbjct: 239 KIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLG 298

Query: 123 KCDVALEMMKEMKSLGIIPDVFTWTSMVSGFAKSNGISKAL 1
            CD+A+++M++M+  GI PDV+TWTSM+SGF +   IS AL
Sbjct: 299 HCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHAL 339



 Score = 33.5 bits (75), Expect(2) = 2e-50
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = -3

Query: 532 KRWGEVVELFYAMMEEGV 479
           K WGEVV LFYAMM +GV
Sbjct: 162 KSWGEVVGLFYAMMRDGV 179



 Score =  104 bits (260), Expect = 7e-21
 Identities = 57/149 (38%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
 Frame = -1

Query: 444 ACGNCGDLRTAKVIHSIVVKCGMDVYVRVNNTMLAAYGKCGQLGCLKRYFRNMEGKDLVS 265
           AC     L     IHSI VK  +   V V N+++  Y KCG L   +  F  M  +D+ S
Sbjct: 363 ACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYS 422

Query: 264 WNSVISGYCRKGEIGEAHRLFEMMYDEGFEPGLVTWNTMISTYNQLGKCDVALEMMKEMK 85
           WNS+I GY + G  G+AH LF  M +    P ++TWN MI+ Y Q G  D AL++ K ++
Sbjct: 423 WNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIE 482

Query: 84  SLGIIP-DVFTWTSMVSGFAKSNGISKAL 1
             G    +  +W S++SGF +S    KAL
Sbjct: 483 KDGKTKRNAASWNSLISGFVQSGQKDKAL 511



 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 37/123 (30%), Positives = 57/123 (46%)
 Frame = -1

Query: 483 VFPDEFLFVKILHACGNCGDLRTAKVIHSIVVKCGMDVYVRVNNTMLAAYGKCGQLGCLK 304
           + P+    + IL  C N    +  K IH   V+  +   + V+N ++ +Y K G L   K
Sbjct: 522 ILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSK 581

Query: 303 RYFRNMEGKDLVSWNSVISGYCRKGEIGEAHRLFEMMYDEGFEPGLVTWNTMISTYNQLG 124
             F  +  KD VSWNS++S Y   G    A  LF  M  +G +P   T+ +++  Y   G
Sbjct: 582 NIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAG 641

Query: 123 KCD 115
             D
Sbjct: 642 MVD 644