BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019825
         (1102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|2...   342   7e-92
ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II tra...   340   3e-91
ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymera...   335   2e-89
ref|XP_002516976.1| conserved hypothetical protein [Ricinus comm...   333   3e-89
ref|NP_180390.2| TATA-binding related factor (TRF) of subunit 20...   333   3e-89

>ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|222833473|gb|EEE71950.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  342 bits (878), Expect = 7e-92
 Identities = 162/221 (73%), Positives = 191/221 (86%), Gaps = 2/221 (0%)
 Frame = -3

Query: 959 MPVKWVLHWQPNAGTSVNSQILTEVSQCAESINGVKGGRWKATLNFYRPMLKEQVNPAEF 780
           MP+KWVLHWQPNAGT+VN+QIL EV+QC ESINGVK GRWKAT+ +Y+P+L++Q    E 
Sbjct: 1   MPLKWVLHWQPNAGTTVNTQILNEVTQCVESINGVKEGRWKATVTYYKPILRDQSQAPEL 60

Query: 779 PRDFLGISLQEQPSKYYFVIRGQRIVLEADSNIQSIMEKLQSYKSRVALNFEGFQYQLGD 600
           PRDFLGISL EQP+KYYF+IRGQRIVLEADS+IQ+IMEKLQSYKSRVAL FEGFQYQLGD
Sbjct: 61  PRDFLGISLPEQPNKYYFIIRGQRIVLEADSSIQTIMEKLQSYKSRVALYFEGFQYQLGD 120

Query: 599 FQLRVGKVVPVHSESLRGIVMEMDYLPISSWEKSHQIMAEFYDIWQEALQKRSLPGHFAR 420
           FQLRVGKV P HS++LRGI+ME++YLP+SS +KS Q+M EF DIWQEA+ KRSLPGHF  
Sbjct: 121 FQLRVGKVTPTHSDNLRGIIMEVEYLPLSSIDKSRQVMEEFVDIWQEAISKRSLPGHFMH 180

Query: 419 MEPNFGDYGLGDQYTLPHTAVQYASIMLQMIATS--QSVRN 303
           MEPNF +YGL D Y+  HTAVQYA++M Q+IAT   Q+ RN
Sbjct: 181 MEPNFVEYGLSDHYSSQHTAVQYATVMAQLIATQSVQAARN 221


>ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Cucumis sativus]
           gi|449488087|ref|XP_004157936.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 20a-like
           [Cucumis sativus]
          Length = 223

 Score =  340 bits (873), Expect = 3e-91
 Identities = 164/223 (73%), Positives = 193/223 (86%), Gaps = 1/223 (0%)
 Frame = -3

Query: 959 MPVKWVLHWQPNAGTSVNSQILTEVSQCAESINGVKGGRWKATLNFYRPMLKEQVNPA-E 783
           MP+KWVLHWQPNAG++VNSQIL EVSQC ESI+GVKGG+WKATL FY+P+L++Q +PA E
Sbjct: 1   MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNSPAAE 60

Query: 782 FPRDFLGISLQEQPSKYYFVIRGQRIVLEADSNIQSIMEKLQSYKSRVALNFEGFQYQLG 603
           FPRDFLGISL EQP+KYY +IRGQRIVLEAD  IQ+IMEKLQSYK RVALNFEGFQYQLG
Sbjct: 61  FPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLG 120

Query: 602 DFQLRVGKVVPVHSESLRGIVMEMDYLPISSWEKSHQIMAEFYDIWQEALQKRSLPGHFA 423
           DFQLRVGKVVP +SE+LRGIVME++YLPISS EKS Q+M EF+D+WQEA+ K SLPG F 
Sbjct: 121 DFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSRQVMEEFFDVWQEAMSKSSLPGRFM 180

Query: 422 RMEPNFGDYGLGDQYTLPHTAVQYASIMLQMIATSQSVRN*TN 294
            +E NF +YGL D YT  HTAVQY ++M Q+IAT Q+V++  N
Sbjct: 181 HIESNFAEYGLSDYYTSQHTAVQYGNVMAQLIATVQAVQSARN 223


>ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 20-like [Vitis vinifera]
          Length = 222

 Score =  335 bits (858), Expect = 2e-89
 Identities = 159/222 (71%), Positives = 188/222 (84%), Gaps = 3/222 (1%)
 Frame = -3

Query: 959 MPVKWVLHWQPNAGTSVNSQILTEVSQCAESINGVKGGRWKATLNFYRPMLKEQVNPAEF 780
           MP+KWV HWQPNAGT+VNSQ++ EVSQC ESINGVK GRWKATL FY+PM ++Q  PAE+
Sbjct: 1   MPLKWVFHWQPNAGTTVNSQMINEVSQCVESINGVKEGRWKATLTFYKPMFRDQAVPAEY 60

Query: 779 PRDFLGISLQEQPSKYYFVIRGQRIVLEADSNIQSIMEKLQSYKSRVALNFEGFQYQLGD 600
           PRDFLGISL EQP++YYF+IR Q+IVLEADS+IQ IMEKLQSYKSRV+L FEGFQYQLGD
Sbjct: 61  PRDFLGISLPEQPNRYYFIIRSQKIVLEADSSIQMIMEKLQSYKSRVSLTFEGFQYQLGD 120

Query: 599 FQLRVGKVVPVHSESLRGIVMEMDYLPISSWEKSHQIMAEFYDIWQEALQKRSLPGHFAR 420
           FQLRVGKV P  SE+LRGIV E++YLP+SS EKS QI+  F +IWQEA+ KRSLPGHF  
Sbjct: 121 FQLRVGKVAPSASENLRGIVFEVEYLPLSSMEKSRQILDGFVEIWQEAMSKRSLPGHFMH 180

Query: 419 MEPNFGDYGLGDQYTLPHTAVQYASIMLQMIA---TSQSVRN 303
           +EPNF ++GL D YT  HTAVQYA++M Q+I+   T+Q VRN
Sbjct: 181 IEPNFAEFGLSDHYTSQHTAVQYATVMAQLISAVQTAQGVRN 222


>ref|XP_002516976.1| conserved hypothetical protein [Ricinus communis]
           gi|223544064|gb|EEF45590.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score =  333 bits (855), Expect = 3e-89
 Identities = 164/221 (74%), Positives = 188/221 (85%), Gaps = 2/221 (0%)
 Frame = -3

Query: 959 MPVKWVLHWQPNAGTSVNSQILTEVSQCAESINGVKGGRWKATLNFYRPMLKEQVNPAEF 780
           MP+KWVLHWQPNAGT+VN+QIL EVSQC ESINGVK GRWKA L  Y+PML++Q    EF
Sbjct: 1   MPLKWVLHWQPNAGTTVNTQILNEVSQCVESINGVKEGRWKAALTSYKPMLRDQSLTPEF 60

Query: 779 PRDFLGISLQEQPSKYYFVIRGQRIVLEADSNIQSIMEKLQSYKSRVALNFEGFQYQLGD 600
           PRDFLGISL EQP+KYYF+IRGQR+V+EADS+IQ+IMEKLQSYKSRVAL FEGFQYQLGD
Sbjct: 61  PRDFLGISLPEQPNKYYFMIRGQRLVVEADSSIQTIMEKLQSYKSRVALLFEGFQYQLGD 120

Query: 599 FQLRVGKVVPVHSESLRGIVMEMDYLPISSWEKSHQIMAEFYDIWQEALQKRSLPGHFAR 420
           FQLRVGKVVP HSE+LRGIVME++YLPISS EK+  IM EF DIWQEA+ KRSLPG F  
Sbjct: 121 FQLRVGKVVPNHSENLRGIVMEVEYLPISSIEKARPIMEEFVDIWQEAISKRSLPGQFMH 180

Query: 419 MEPNFGDYGLGDQYTLPHTAVQYASIMLQMIATS--QSVRN 303
           +E NF DYGL D YT  HTA+QYA+++ Q+IAT   Q+ RN
Sbjct: 181 IETNFADYGLFDHYTPQHTALQYATVIAQLIATQTVQAARN 221


>ref|NP_180390.2| TATA-binding related factor (TRF) of subunit 20 of Mediator complex
           [Arabidopsis thaliana]
           gi|75127115|sp|Q6NPF4.1|MD20A_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           20a gi|38454106|gb|AAR20747.1| At2g28230 [Arabidopsis
           thaliana] gi|38604010|gb|AAR24748.1| At2g28230
           [Arabidopsis thaliana] gi|330252999|gb|AEC08093.1|
           TATA-binding related factor (TRF) of subunit 20 of
           Mediator complex [Arabidopsis thaliana]
          Length = 219

 Score =  333 bits (855), Expect = 3e-89
 Identities = 159/218 (72%), Positives = 188/218 (86%)
 Frame = -3

Query: 959 MPVKWVLHWQPNAGTSVNSQILTEVSQCAESINGVKGGRWKATLNFYRPMLKEQVNPAEF 780
           MPVKWVLHWQPN G++V+SQIL E +QC ESINGVK GRWKATLN+Y+PMLK+Q N  EF
Sbjct: 1   MPVKWVLHWQPNQGSTVSSQILNEATQCVESINGVKEGRWKATLNYYKPMLKDQANQLEF 60

Query: 779 PRDFLGISLQEQPSKYYFVIRGQRIVLEADSNIQSIMEKLQSYKSRVALNFEGFQYQLGD 600
           PRDFLGISL +QP+KYYF+IR QRIVLEADS+IQ IMEKLQSYKS+VAL F+GFQYQLGD
Sbjct: 61  PRDFLGISLADQPNKYYFIIRTQRIVLEADSSIQLIMEKLQSYKSKVALYFDGFQYQLGD 120

Query: 599 FQLRVGKVVPVHSESLRGIVMEMDYLPISSWEKSHQIMAEFYDIWQEALQKRSLPGHFAR 420
           F+LRVGKVVP HSE++RGIVME++YLPISS EK+ ++M EF +IW EAL KRSLPG F  
Sbjct: 121 FRLRVGKVVPTHSENVRGIVMEVEYLPISSMEKAQKVMEEFLEIWNEALAKRSLPGKFVN 180

Query: 419 MEPNFGDYGLGDQYTLPHTAVQYASIMLQMIATSQSVR 306
           ++ NFG++GLGD YT  HTAV+YA +M  MIAT Q+VR
Sbjct: 181 IDLNFGEFGLGDIYTPQHTAVRYALVMAHMIATVQAVR 218