BLASTX nr result
ID: Cnidium21_contig00019808
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00019808
(979 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ... 282 8e-74
emb|CBI17056.3| unnamed protein product [Vitis vinifera] 282 8e-74
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p... 271 1e-70
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2... 269 7e-70
ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [... 258 2e-66
>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
vinifera]
Length = 2214
Score = 282 bits (722), Expect = 8e-74
Identities = 140/185 (75%), Positives = 150/185 (81%), Gaps = 3/185 (1%)
Frame = +3
Query: 18 NDIYTGDPALEFIKHVCAVMALDQNVQHDILIMRKNLLKYVRVREFAPEAEFQNHSLGFS 197
ND +TGD ALEFIKHVCAV+ALDQNVQHDIL+MRKNLLKYV VREFAPEAEF + F
Sbjct: 2029 NDQHTGDAALEFIKHVCAVLALDQNVQHDILVMRKNLLKYVHVREFAPEAEFCDPCQSFI 2088
Query: 198 LPNVICSYXXXXXXXXXXXXXXXMAQEWRC---QCGQPYDREVMENGLLQIVRQRERLYH 368
LPNVICSY +AQEWRC QCGQPYDREVMEN LLQIVRQRERLYH
Sbjct: 2089 LPNVICSYCNDCRDLDLCRDSALLAQEWRCAVPQCGQPYDREVMENALLQIVRQRERLYH 2148
Query: 369 VQDLVCLKCNQVKAAHMAEHCACAGSFRCKEVFPEFRSKMEVFFKIAKQQKFQLLQECTS 548
VQDLVCLKCNQVKAAH+AE C+CAGSFRCKE EF+SKM+VF KIA QKFQLLQECTS
Sbjct: 2149 VQDLVCLKCNQVKAAHLAEQCSCAGSFRCKEDVSEFQSKMQVFLKIAMLQKFQLLQECTS 2208
Query: 549 WILEV 563
WILE+
Sbjct: 2209 WILEI 2213
>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
Length = 2723
Score = 282 bits (722), Expect = 8e-74
Identities = 140/185 (75%), Positives = 150/185 (81%), Gaps = 3/185 (1%)
Frame = +3
Query: 18 NDIYTGDPALEFIKHVCAVMALDQNVQHDILIMRKNLLKYVRVREFAPEAEFQNHSLGFS 197
ND +TGD ALEFIKHVCAV+ALDQNVQHDIL+MRKNLLKYV VREFAPEAEF + F
Sbjct: 2538 NDQHTGDAALEFIKHVCAVLALDQNVQHDILVMRKNLLKYVHVREFAPEAEFCDPCQSFI 2597
Query: 198 LPNVICSYXXXXXXXXXXXXXXXMAQEWRC---QCGQPYDREVMENGLLQIVRQRERLYH 368
LPNVICSY +AQEWRC QCGQPYDREVMEN LLQIVRQRERLYH
Sbjct: 2598 LPNVICSYCNDCRDLDLCRDSALLAQEWRCAVPQCGQPYDREVMENALLQIVRQRERLYH 2657
Query: 369 VQDLVCLKCNQVKAAHMAEHCACAGSFRCKEVFPEFRSKMEVFFKIAKQQKFQLLQECTS 548
VQDLVCLKCNQVKAAH+AE C+CAGSFRCKE EF+SKM+VF KIA QKFQLLQECTS
Sbjct: 2658 VQDLVCLKCNQVKAAHLAEQCSCAGSFRCKEDVSEFQSKMQVFLKIAMLQKFQLLQECTS 2717
Query: 549 WILEV 563
WILE+
Sbjct: 2718 WILEI 2722
>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
communis] gi|223531477|gb|EEF33309.1| DNA polymerase
epsilon, catalytic subunit, putative [Ricinus communis]
Length = 2227
Score = 271 bits (694), Expect = 1e-70
Identities = 132/189 (69%), Positives = 149/189 (78%), Gaps = 3/189 (1%)
Frame = +3
Query: 6 PQVGNDIYTGDPALEFIKHVCAVMALDQNVQHDILIMRKNLLKYVRVREFAPEAEFQNHS 185
PQV +I+ PALEFIKHVCAV+ALD NVQH++L+MRKNLLKYVRVREFAPEAEF +
Sbjct: 2038 PQVAGNIHKRVPALEFIKHVCAVLALDLNVQHEVLVMRKNLLKYVRVREFAPEAEFHDPC 2097
Query: 186 LGFSLPNVICSYXXXXXXXXXXXXXXXMAQEWRC---QCGQPYDREVMENGLLQIVRQRE 356
F LPNVICSY +AQEWRC QCGQPYDRE MEN LLQIVRQRE
Sbjct: 2098 PSFVLPNVICSYCNDCRDLDLCRDTALLAQEWRCAVPQCGQPYDREGMENALLQIVRQRE 2157
Query: 357 RLYHVQDLVCLKCNQVKAAHMAEHCACAGSFRCKEVFPEFRSKMEVFFKIAKQQKFQLLQ 536
RLYH+QDLVC++CNQVKAAH+AE CACAG++RCKE EFRSKM++F +A QKFQLLQ
Sbjct: 2158 RLYHLQDLVCIRCNQVKAAHLAEQCACAGAYRCKEDVSEFRSKMQIFLNVAISQKFQLLQ 2217
Query: 537 ECTSWILEV 563
ECTSWILEV
Sbjct: 2218 ECTSWILEV 2226
>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
predicted protein [Populus trichocarpa]
Length = 2221
Score = 269 bits (688), Expect = 7e-70
Identities = 128/182 (70%), Positives = 148/182 (81%), Gaps = 3/182 (1%)
Frame = +3
Query: 27 YTGDPALEFIKHVCAVMALDQNVQHDILIMRKNLLKYVRVREFAPEAEFQNHSLGFSLPN 206
+ GDPALEFIKHVCAV+ALDQ+VQH++L+MRKNLLKYVRVREFAPEAEF + F LPN
Sbjct: 2038 HKGDPALEFIKHVCAVLALDQHVQHEVLVMRKNLLKYVRVREFAPEAEFHDPCPSFILPN 2097
Query: 207 VICSYXXXXXXXXXXXXXXXMAQEWRC---QCGQPYDREVMENGLLQIVRQRERLYHVQD 377
VICSY +A+EWRC QCGQPYDREVMEN LLQIVRQRERLYH+QD
Sbjct: 2098 VICSYCNDCRDLDLCRDSAVLAEEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHLQD 2157
Query: 378 LVCLKCNQVKAAHMAEHCACAGSFRCKEVFPEFRSKMEVFFKIAKQQKFQLLQECTSWIL 557
LVCL+CNQVKAAH++E C+CAGS+RC+E EFR KM++F +A +QKFQLLQECTSWIL
Sbjct: 2158 LVCLRCNQVKAAHLSEQCSCAGSYRCREDVSEFRRKMQIFLNVAIRQKFQLLQECTSWIL 2217
Query: 558 EV 563
EV
Sbjct: 2218 EV 2219
>ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula]
gi|355507282|gb|AES88424.1| DNA polymerase epsilon
catalytic subunit A [Medicago truncatula]
Length = 2248
Score = 258 bits (658), Expect = 2e-66
Identities = 124/188 (65%), Positives = 145/188 (77%), Gaps = 3/188 (1%)
Frame = +3
Query: 9 QVGNDIYTGDPALEFIKHVCAVMALDQNVQHDILIMRKNLLKYVRVREFAPEAEFQNHSL 188
Q+ +D++ GD ALEFIKHVCAV+ALDQ+VQHD+ +MRKNLLKYVRVREFAPEAEF +
Sbjct: 2058 QLTDDLHRGDAALEFIKHVCAVLALDQSVQHDVHVMRKNLLKYVRVREFAPEAEFHDPCH 2117
Query: 189 GFSLPNVICSYXXXXXXXXXXXXXXXMAQEWRC---QCGQPYDREVMENGLLQIVRQRER 359
F LPNVICSY + +EW C QCGQPYDREVMEN LLQI RQRER
Sbjct: 2118 SFILPNVICSYCNECRDLDLCRDPTLLNEEWHCAVPQCGQPYDREVMENALLQIARQRER 2177
Query: 360 LYHVQDLVCLKCNQVKAAHMAEHCACAGSFRCKEVFPEFRSKMEVFFKIAKQQKFQLLQE 539
YH+QDLVC++CNQVKAAH+AE CACAGSF+CKE EF KM V + IA +QKFQLLQE
Sbjct: 2178 QYHLQDLVCVRCNQVKAAHLAEQCACAGSFKCKEDATEFCKKMRVIYNIASRQKFQLLQE 2237
Query: 540 CTSWILEV 563
CT+W+LE+
Sbjct: 2238 CTAWMLEL 2245