BLASTX nr result
ID: Cnidium21_contig00019808
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00019808 (979 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ... 282 8e-74 emb|CBI17056.3| unnamed protein product [Vitis vinifera] 282 8e-74 ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p... 271 1e-70 ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2... 269 7e-70 ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [... 258 2e-66 >ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis vinifera] Length = 2214 Score = 282 bits (722), Expect = 8e-74 Identities = 140/185 (75%), Positives = 150/185 (81%), Gaps = 3/185 (1%) Frame = +3 Query: 18 NDIYTGDPALEFIKHVCAVMALDQNVQHDILIMRKNLLKYVRVREFAPEAEFQNHSLGFS 197 ND +TGD ALEFIKHVCAV+ALDQNVQHDIL+MRKNLLKYV VREFAPEAEF + F Sbjct: 2029 NDQHTGDAALEFIKHVCAVLALDQNVQHDILVMRKNLLKYVHVREFAPEAEFCDPCQSFI 2088 Query: 198 LPNVICSYXXXXXXXXXXXXXXXMAQEWRC---QCGQPYDREVMENGLLQIVRQRERLYH 368 LPNVICSY +AQEWRC QCGQPYDREVMEN LLQIVRQRERLYH Sbjct: 2089 LPNVICSYCNDCRDLDLCRDSALLAQEWRCAVPQCGQPYDREVMENALLQIVRQRERLYH 2148 Query: 369 VQDLVCLKCNQVKAAHMAEHCACAGSFRCKEVFPEFRSKMEVFFKIAKQQKFQLLQECTS 548 VQDLVCLKCNQVKAAH+AE C+CAGSFRCKE EF+SKM+VF KIA QKFQLLQECTS Sbjct: 2149 VQDLVCLKCNQVKAAHLAEQCSCAGSFRCKEDVSEFQSKMQVFLKIAMLQKFQLLQECTS 2208 Query: 549 WILEV 563 WILE+ Sbjct: 2209 WILEI 2213 >emb|CBI17056.3| unnamed protein product [Vitis vinifera] Length = 2723 Score = 282 bits (722), Expect = 8e-74 Identities = 140/185 (75%), Positives = 150/185 (81%), Gaps = 3/185 (1%) Frame = +3 Query: 18 NDIYTGDPALEFIKHVCAVMALDQNVQHDILIMRKNLLKYVRVREFAPEAEFQNHSLGFS 197 ND +TGD ALEFIKHVCAV+ALDQNVQHDIL+MRKNLLKYV VREFAPEAEF + F Sbjct: 2538 NDQHTGDAALEFIKHVCAVLALDQNVQHDILVMRKNLLKYVHVREFAPEAEFCDPCQSFI 2597 Query: 198 LPNVICSYXXXXXXXXXXXXXXXMAQEWRC---QCGQPYDREVMENGLLQIVRQRERLYH 368 LPNVICSY +AQEWRC QCGQPYDREVMEN LLQIVRQRERLYH Sbjct: 2598 LPNVICSYCNDCRDLDLCRDSALLAQEWRCAVPQCGQPYDREVMENALLQIVRQRERLYH 2657 Query: 369 VQDLVCLKCNQVKAAHMAEHCACAGSFRCKEVFPEFRSKMEVFFKIAKQQKFQLLQECTS 548 VQDLVCLKCNQVKAAH+AE C+CAGSFRCKE EF+SKM+VF KIA QKFQLLQECTS Sbjct: 2658 VQDLVCLKCNQVKAAHLAEQCSCAGSFRCKEDVSEFQSKMQVFLKIAMLQKFQLLQECTS 2717 Query: 549 WILEV 563 WILE+ Sbjct: 2718 WILEI 2722 >ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus communis] gi|223531477|gb|EEF33309.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus communis] Length = 2227 Score = 271 bits (694), Expect = 1e-70 Identities = 132/189 (69%), Positives = 149/189 (78%), Gaps = 3/189 (1%) Frame = +3 Query: 6 PQVGNDIYTGDPALEFIKHVCAVMALDQNVQHDILIMRKNLLKYVRVREFAPEAEFQNHS 185 PQV +I+ PALEFIKHVCAV+ALD NVQH++L+MRKNLLKYVRVREFAPEAEF + Sbjct: 2038 PQVAGNIHKRVPALEFIKHVCAVLALDLNVQHEVLVMRKNLLKYVRVREFAPEAEFHDPC 2097 Query: 186 LGFSLPNVICSYXXXXXXXXXXXXXXXMAQEWRC---QCGQPYDREVMENGLLQIVRQRE 356 F LPNVICSY +AQEWRC QCGQPYDRE MEN LLQIVRQRE Sbjct: 2098 PSFVLPNVICSYCNDCRDLDLCRDTALLAQEWRCAVPQCGQPYDREGMENALLQIVRQRE 2157 Query: 357 RLYHVQDLVCLKCNQVKAAHMAEHCACAGSFRCKEVFPEFRSKMEVFFKIAKQQKFQLLQ 536 RLYH+QDLVC++CNQVKAAH+AE CACAG++RCKE EFRSKM++F +A QKFQLLQ Sbjct: 2158 RLYHLQDLVCIRCNQVKAAHLAEQCACAGAYRCKEDVSEFRSKMQIFLNVAISQKFQLLQ 2217 Query: 537 ECTSWILEV 563 ECTSWILEV Sbjct: 2218 ECTSWILEV 2226 >ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1| predicted protein [Populus trichocarpa] Length = 2221 Score = 269 bits (688), Expect = 7e-70 Identities = 128/182 (70%), Positives = 148/182 (81%), Gaps = 3/182 (1%) Frame = +3 Query: 27 YTGDPALEFIKHVCAVMALDQNVQHDILIMRKNLLKYVRVREFAPEAEFQNHSLGFSLPN 206 + GDPALEFIKHVCAV+ALDQ+VQH++L+MRKNLLKYVRVREFAPEAEF + F LPN Sbjct: 2038 HKGDPALEFIKHVCAVLALDQHVQHEVLVMRKNLLKYVRVREFAPEAEFHDPCPSFILPN 2097 Query: 207 VICSYXXXXXXXXXXXXXXXMAQEWRC---QCGQPYDREVMENGLLQIVRQRERLYHVQD 377 VICSY +A+EWRC QCGQPYDREVMEN LLQIVRQRERLYH+QD Sbjct: 2098 VICSYCNDCRDLDLCRDSAVLAEEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHLQD 2157 Query: 378 LVCLKCNQVKAAHMAEHCACAGSFRCKEVFPEFRSKMEVFFKIAKQQKFQLLQECTSWIL 557 LVCL+CNQVKAAH++E C+CAGS+RC+E EFR KM++F +A +QKFQLLQECTSWIL Sbjct: 2158 LVCLRCNQVKAAHLSEQCSCAGSYRCREDVSEFRRKMQIFLNVAIRQKFQLLQECTSWIL 2217 Query: 558 EV 563 EV Sbjct: 2218 EV 2219 >ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula] gi|355507282|gb|AES88424.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula] Length = 2248 Score = 258 bits (658), Expect = 2e-66 Identities = 124/188 (65%), Positives = 145/188 (77%), Gaps = 3/188 (1%) Frame = +3 Query: 9 QVGNDIYTGDPALEFIKHVCAVMALDQNVQHDILIMRKNLLKYVRVREFAPEAEFQNHSL 188 Q+ +D++ GD ALEFIKHVCAV+ALDQ+VQHD+ +MRKNLLKYVRVREFAPEAEF + Sbjct: 2058 QLTDDLHRGDAALEFIKHVCAVLALDQSVQHDVHVMRKNLLKYVRVREFAPEAEFHDPCH 2117 Query: 189 GFSLPNVICSYXXXXXXXXXXXXXXXMAQEWRC---QCGQPYDREVMENGLLQIVRQRER 359 F LPNVICSY + +EW C QCGQPYDREVMEN LLQI RQRER Sbjct: 2118 SFILPNVICSYCNECRDLDLCRDPTLLNEEWHCAVPQCGQPYDREVMENALLQIARQRER 2177 Query: 360 LYHVQDLVCLKCNQVKAAHMAEHCACAGSFRCKEVFPEFRSKMEVFFKIAKQQKFQLLQE 539 YH+QDLVC++CNQVKAAH+AE CACAGSF+CKE EF KM V + IA +QKFQLLQE Sbjct: 2178 QYHLQDLVCVRCNQVKAAHLAEQCACAGSFKCKEDATEFCKKMRVIYNIASRQKFQLLQE 2237 Query: 540 CTSWILEV 563 CT+W+LE+ Sbjct: 2238 CTAWMLEL 2245