BLASTX nr result

ID: Cnidium21_contig00019808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019808
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   282   8e-74
emb|CBI17056.3| unnamed protein product [Vitis vinifera]              282   8e-74
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   271   1e-70
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   269   7e-70
ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [...   258   2e-66

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score =  282 bits (722), Expect = 8e-74
 Identities = 140/185 (75%), Positives = 150/185 (81%), Gaps = 3/185 (1%)
 Frame = +3

Query: 18   NDIYTGDPALEFIKHVCAVMALDQNVQHDILIMRKNLLKYVRVREFAPEAEFQNHSLGFS 197
            ND +TGD ALEFIKHVCAV+ALDQNVQHDIL+MRKNLLKYV VREFAPEAEF +    F 
Sbjct: 2029 NDQHTGDAALEFIKHVCAVLALDQNVQHDILVMRKNLLKYVHVREFAPEAEFCDPCQSFI 2088

Query: 198  LPNVICSYXXXXXXXXXXXXXXXMAQEWRC---QCGQPYDREVMENGLLQIVRQRERLYH 368
            LPNVICSY               +AQEWRC   QCGQPYDREVMEN LLQIVRQRERLYH
Sbjct: 2089 LPNVICSYCNDCRDLDLCRDSALLAQEWRCAVPQCGQPYDREVMENALLQIVRQRERLYH 2148

Query: 369  VQDLVCLKCNQVKAAHMAEHCACAGSFRCKEVFPEFRSKMEVFFKIAKQQKFQLLQECTS 548
            VQDLVCLKCNQVKAAH+AE C+CAGSFRCKE   EF+SKM+VF KIA  QKFQLLQECTS
Sbjct: 2149 VQDLVCLKCNQVKAAHLAEQCSCAGSFRCKEDVSEFQSKMQVFLKIAMLQKFQLLQECTS 2208

Query: 549  WILEV 563
            WILE+
Sbjct: 2209 WILEI 2213


>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score =  282 bits (722), Expect = 8e-74
 Identities = 140/185 (75%), Positives = 150/185 (81%), Gaps = 3/185 (1%)
 Frame = +3

Query: 18   NDIYTGDPALEFIKHVCAVMALDQNVQHDILIMRKNLLKYVRVREFAPEAEFQNHSLGFS 197
            ND +TGD ALEFIKHVCAV+ALDQNVQHDIL+MRKNLLKYV VREFAPEAEF +    F 
Sbjct: 2538 NDQHTGDAALEFIKHVCAVLALDQNVQHDILVMRKNLLKYVHVREFAPEAEFCDPCQSFI 2597

Query: 198  LPNVICSYXXXXXXXXXXXXXXXMAQEWRC---QCGQPYDREVMENGLLQIVRQRERLYH 368
            LPNVICSY               +AQEWRC   QCGQPYDREVMEN LLQIVRQRERLYH
Sbjct: 2598 LPNVICSYCNDCRDLDLCRDSALLAQEWRCAVPQCGQPYDREVMENALLQIVRQRERLYH 2657

Query: 369  VQDLVCLKCNQVKAAHMAEHCACAGSFRCKEVFPEFRSKMEVFFKIAKQQKFQLLQECTS 548
            VQDLVCLKCNQVKAAH+AE C+CAGSFRCKE   EF+SKM+VF KIA  QKFQLLQECTS
Sbjct: 2658 VQDLVCLKCNQVKAAHLAEQCSCAGSFRCKEDVSEFQSKMQVFLKIAMLQKFQLLQECTS 2717

Query: 549  WILEV 563
            WILE+
Sbjct: 2718 WILEI 2722


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  271 bits (694), Expect = 1e-70
 Identities = 132/189 (69%), Positives = 149/189 (78%), Gaps = 3/189 (1%)
 Frame = +3

Query: 6    PQVGNDIYTGDPALEFIKHVCAVMALDQNVQHDILIMRKNLLKYVRVREFAPEAEFQNHS 185
            PQV  +I+   PALEFIKHVCAV+ALD NVQH++L+MRKNLLKYVRVREFAPEAEF +  
Sbjct: 2038 PQVAGNIHKRVPALEFIKHVCAVLALDLNVQHEVLVMRKNLLKYVRVREFAPEAEFHDPC 2097

Query: 186  LGFSLPNVICSYXXXXXXXXXXXXXXXMAQEWRC---QCGQPYDREVMENGLLQIVRQRE 356
              F LPNVICSY               +AQEWRC   QCGQPYDRE MEN LLQIVRQRE
Sbjct: 2098 PSFVLPNVICSYCNDCRDLDLCRDTALLAQEWRCAVPQCGQPYDREGMENALLQIVRQRE 2157

Query: 357  RLYHVQDLVCLKCNQVKAAHMAEHCACAGSFRCKEVFPEFRSKMEVFFKIAKQQKFQLLQ 536
            RLYH+QDLVC++CNQVKAAH+AE CACAG++RCKE   EFRSKM++F  +A  QKFQLLQ
Sbjct: 2158 RLYHLQDLVCIRCNQVKAAHLAEQCACAGAYRCKEDVSEFRSKMQIFLNVAISQKFQLLQ 2217

Query: 537  ECTSWILEV 563
            ECTSWILEV
Sbjct: 2218 ECTSWILEV 2226


>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  269 bits (688), Expect = 7e-70
 Identities = 128/182 (70%), Positives = 148/182 (81%), Gaps = 3/182 (1%)
 Frame = +3

Query: 27   YTGDPALEFIKHVCAVMALDQNVQHDILIMRKNLLKYVRVREFAPEAEFQNHSLGFSLPN 206
            + GDPALEFIKHVCAV+ALDQ+VQH++L+MRKNLLKYVRVREFAPEAEF +    F LPN
Sbjct: 2038 HKGDPALEFIKHVCAVLALDQHVQHEVLVMRKNLLKYVRVREFAPEAEFHDPCPSFILPN 2097

Query: 207  VICSYXXXXXXXXXXXXXXXMAQEWRC---QCGQPYDREVMENGLLQIVRQRERLYHVQD 377
            VICSY               +A+EWRC   QCGQPYDREVMEN LLQIVRQRERLYH+QD
Sbjct: 2098 VICSYCNDCRDLDLCRDSAVLAEEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHLQD 2157

Query: 378  LVCLKCNQVKAAHMAEHCACAGSFRCKEVFPEFRSKMEVFFKIAKQQKFQLLQECTSWIL 557
            LVCL+CNQVKAAH++E C+CAGS+RC+E   EFR KM++F  +A +QKFQLLQECTSWIL
Sbjct: 2158 LVCLRCNQVKAAHLSEQCSCAGSYRCREDVSEFRRKMQIFLNVAIRQKFQLLQECTSWIL 2217

Query: 558  EV 563
            EV
Sbjct: 2218 EV 2219


>ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula]
            gi|355507282|gb|AES88424.1| DNA polymerase epsilon
            catalytic subunit A [Medicago truncatula]
          Length = 2248

 Score =  258 bits (658), Expect = 2e-66
 Identities = 124/188 (65%), Positives = 145/188 (77%), Gaps = 3/188 (1%)
 Frame = +3

Query: 9    QVGNDIYTGDPALEFIKHVCAVMALDQNVQHDILIMRKNLLKYVRVREFAPEAEFQNHSL 188
            Q+ +D++ GD ALEFIKHVCAV+ALDQ+VQHD+ +MRKNLLKYVRVREFAPEAEF +   
Sbjct: 2058 QLTDDLHRGDAALEFIKHVCAVLALDQSVQHDVHVMRKNLLKYVRVREFAPEAEFHDPCH 2117

Query: 189  GFSLPNVICSYXXXXXXXXXXXXXXXMAQEWRC---QCGQPYDREVMENGLLQIVRQRER 359
             F LPNVICSY               + +EW C   QCGQPYDREVMEN LLQI RQRER
Sbjct: 2118 SFILPNVICSYCNECRDLDLCRDPTLLNEEWHCAVPQCGQPYDREVMENALLQIARQRER 2177

Query: 360  LYHVQDLVCLKCNQVKAAHMAEHCACAGSFRCKEVFPEFRSKMEVFFKIAKQQKFQLLQE 539
             YH+QDLVC++CNQVKAAH+AE CACAGSF+CKE   EF  KM V + IA +QKFQLLQE
Sbjct: 2178 QYHLQDLVCVRCNQVKAAHLAEQCACAGSFKCKEDATEFCKKMRVIYNIASRQKFQLLQE 2237

Query: 540  CTSWILEV 563
            CT+W+LE+
Sbjct: 2238 CTAWMLEL 2245


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