BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019800
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002460099.1| hypothetical protein SORBIDRAFT_02g022750 [S...    99   3e-19
ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L...    99   5e-19
ref|NP_001063337.1| Os09g0452700 [Oryza sativa Japonica Group] g...    96   4e-18
ref|XP_002460727.1| hypothetical protein SORBIDRAFT_02g033880 [S...    94   9e-18
ref|XP_003561800.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60...    93   3e-17

>ref|XP_002460099.1| hypothetical protein SORBIDRAFT_02g022750 [Sorghum bicolor]
           gi|241923476|gb|EER96620.1| hypothetical protein
           SORBIDRAFT_02g022750 [Sorghum bicolor]
          Length = 139

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 61/131 (46%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
 Frame = -3

Query: 385 MQIFVKSLGNKTIALGVESSDSVEFVKKLVVQQSGXXXXXXXXXXXXXXXXXXXXXXXAG 206
           MQIFVK+L  KT+ L VESSD+V  VK  +  + G                         
Sbjct: 1   MQIFVKTLTGKTVTLEVESSDTVANVKAKIQDKEGIPP---------------------- 38

Query: 205 ADMEELRLVFAGRELEDHRVVGDYLIQNESTLDVLMRLR--GGKGGP-PKIDLNLVALAQ 35
              ++ RL+FAG++LED R + DY IQ ESTL +++RLR  GGKGG  PKIDLNL+ LA 
Sbjct: 39  ---DQQRLIFAGKQLEDERTLADYNIQKESTLHLVLRLRGGGGKGGSYPKIDLNLLQLAL 95

Query: 34  KHNQNKMICRK 2
           K+ Q+KMICRK
Sbjct: 96  KYRQHKMICRK 106


>ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Brachypodium
           distachyon]
          Length = 218

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 57/134 (42%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
 Frame = -3

Query: 397 IMSKMQIFVKSLGNKTIALGVESSDSVEFVKKLVVQQSGXXXXXXXXXXXXXXXXXXXXX 218
           + +KMQIFVK+L  KTI L VESSD+++ VK  +  + G                     
Sbjct: 73  LRAKMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPP------------------ 114

Query: 217 XXAGADMEELRLVFAGRELEDHRVVGDYLIQNESTLDVLMRLRGGKGG--PPKIDLNLVA 44
                  ++ RL+FAG++LED R + DY IQ ESTL +++RLRGG  G  P  ++ NL  
Sbjct: 115 -------DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSRGQYPKNLEPNLRI 167

Query: 43  LAQKHNQNKMICRK 2
           LAQK+N+NKM+CRK
Sbjct: 168 LAQKYNENKMVCRK 181



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/99 (37%), Positives = 53/99 (53%)
 Frame = -3

Query: 385 MQIFVKSLGNKTIALGVESSDSVEFVKKLVVQQSGXXXXXXXXXXXXXXXXXXXXXXXAG 206
           MQIFVK+L  KTI L VES D+++ VK  +  + G                         
Sbjct: 1   MQIFVKTLTGKTITLEVESRDTIDSVKAKIQDKEGIPP---------------------- 38

Query: 205 ADMEELRLVFAGRELEDHRVVGDYLIQNESTLDVLMRLR 89
              ++ RL+FAG++L+D R + DY IQ ESTL +++RLR
Sbjct: 39  ---DQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLR 74


>ref|NP_001063337.1| Os09g0452700 [Oryza sativa Japonica Group]
           gi|51535937|dbj|BAD38019.1| putative ubiquitin /
           ribosomal protein CEP52 [Oryza sativa Japonica Group]
           gi|113631570|dbj|BAF25251.1| Os09g0452700 [Oryza sativa
           Japonica Group] gi|125563958|gb|EAZ09338.1| hypothetical
           protein OsI_31610 [Oryza sativa Indica Group]
           gi|125605917|gb|EAZ44953.1| hypothetical protein
           OsJ_29596 [Oryza sativa Japonica Group]
          Length = 140

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 57/130 (43%), Positives = 79/130 (60%), Gaps = 2/130 (1%)
 Frame = -3

Query: 385 MQIFVKSLGNKTIALGVESSDSVEFVKKLVVQQSGXXXXXXXXXXXXXXXXXXXXXXXAG 206
           MQIFVK+L  KTI L VESSD+++ VK  +  + G                         
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP---------------------- 38

Query: 205 ADMEELRLVFAGRELEDHRVVGDYLIQNESTLDVLMRLRGG-KGGPPK-IDLNLVALAQK 32
              ++ RL+FAG++LED R + DY IQ ESTL +++RLRGG +GG PK I+ NL  LAQK
Sbjct: 39  ---DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSRGGYPKGIEPNLRELAQK 95

Query: 31  HNQNKMICRK 2
           +N+NK++CR+
Sbjct: 96  YNENKLVCRR 105


>ref|XP_002460727.1| hypothetical protein SORBIDRAFT_02g033880 [Sorghum bicolor]
           gi|241924104|gb|EER97248.1| hypothetical protein
           SORBIDRAFT_02g033880 [Sorghum bicolor]
          Length = 136

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 57/131 (43%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
 Frame = -3

Query: 385 MQIFVKSLGNKTIALGVESSDSVEFVKKLVVQQSGXXXXXXXXXXXXXXXXXXXXXXXAG 206
           MQIFVK+L  KTI L VESSD+VE VK  +  + G                         
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTVENVKAKIQDKEGIPP---------------------- 38

Query: 205 ADMEELRLVFAGRELEDHRVVGDYLIQNESTLDVLMRLR-GGKGGPP--KIDLNLVALAQ 35
              ++ RL+FAG++L+D R + DY IQ ESTL +++RLR GG+GG P  ++  +L+ LA+
Sbjct: 39  ---DQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGGRGGYPTMRVPWDLINLAR 95

Query: 34  KHNQNKMICRK 2
           KHN+ KMICRK
Sbjct: 96  KHNETKMICRK 106


>ref|XP_003561800.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein
           L40-like [Brachypodium distachyon]
          Length = 260

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 56/131 (42%), Positives = 75/131 (57%)
 Frame = -3

Query: 394 MSKMQIFVKSLGNKTIALGVESSDSVEFVKKLVVQQSGXXXXXXXXXXXXXXXXXXXXXX 215
           + +MQIFVK+L  KTI L VESSD+++ VK  +  + G                      
Sbjct: 126 VEEMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP------------------- 166

Query: 214 XAGADMEELRLVFAGRELEDHRVVGDYLIQNESTLDVLMRLRGGKGGPPKIDLNLVALAQ 35
                 ++ RL+FAG++L+D R + DY IQ ESTL +++RLRGG      I+ NL ALAQ
Sbjct: 167 ------DQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGSS---IIEPNLRALAQ 217

Query: 34  KHNQNKMICRK 2
           KHNQ K ICRK
Sbjct: 218 KHNQRKQICRK 228