BLASTX nr result

ID: Cnidium21_contig00019756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019756
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321931.1| predicted protein [Populus trichocarpa] gi|2...   166   4e-39
ref|XP_002876472.1| hypothetical protein ARALYDRAFT_486318 [Arab...   166   6e-39
ref|XP_002318802.1| predicted protein [Populus trichocarpa] gi|2...   158   1e-36
ref|NP_191425.1| ribosomal protein L1p/L10e family protein [Arab...   155   7e-36
ref|XP_004159957.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal L1...   153   4e-35

>ref|XP_002321931.1| predicted protein [Populus trichocarpa] gi|222868927|gb|EEF06058.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score =  166 bits (421), Expect = 4e-39
 Identities = 95/218 (43%), Positives = 117/218 (53%), Gaps = 5/218 (2%)
 Frame = -1

Query: 643 PTMSTTRVTPETISSAVXXXXXXXXXXXXXXXAQLLPQEEFFYLTLTLKHIPQTGC-RVN 467
           P   ++ V+P+T+  AV                QLL Q+EFFYL LTLK IPQ G  R+N
Sbjct: 5   PPPPSSGVSPKTVEKAVNALLKWRSSTLNTQKPQLLEQDEFFYLILTLKKIPQKGVSRIN 64

Query: 466 PYKIPLPH----PLIQDSEICLIIDDRPXXXXXXXXXXXKVQNDGIXXXXXXXXXXXXSD 299
            +KIPLP+    PLI+  EICLIIDDRP           K+QND +            +D
Sbjct: 65  AHKIPLPNSLINPLIEAPEICLIIDDRPKSGLNKDAAKKKIQNDNLPISKIIKVSKLKTD 124

Query: 298 YKPFEAKRKLCDSYDMFFAAKGVIXXXXXXXXXXXXXXXXXXXPIDLTHKNWKEQIERAC 119
           Y+PFEAKRKL DSYDMFFA K V+                    +DL H NWKEQI++AC
Sbjct: 125 YRPFEAKRKLRDSYDMFFADKRVVPLLPKMLGKQFFKKKKIPVTLDLKHHNWKEQIDKAC 184

Query: 118 GSGLFYIKSGTCSVVKIGRXXXXXXXXXXXXXEGINGV 5
           GS L Y++SGTCSVVK+GR               ING+
Sbjct: 185 GSALLYLRSGTCSVVKVGRVSMSREEIAKNVMAAINGI 222


>ref|XP_002876472.1| hypothetical protein ARALYDRAFT_486318 [Arabidopsis lyrata subsp.
           lyrata] gi|297322310|gb|EFH52731.1| hypothetical protein
           ARALYDRAFT_486318 [Arabidopsis lyrata subsp. lyrata]
          Length = 422

 Score =  166 bits (419), Expect = 6e-39
 Identities = 94/227 (41%), Positives = 122/227 (53%), Gaps = 4/227 (1%)
 Frame = -1

Query: 670 QTYTHKDSKPTMSTTRVTPETISSAVXXXXXXXXXXXXXXXAQLLPQEEFFYLTLTLKHI 491
           Q  T +   P   T+RV+P T+ SA+                QLL Q+E  YL  +LK I
Sbjct: 10  QEQTEQQLVPASQTSRVSPYTVGSALNGLTKWRSEKSKTEKPQLLEQDELVYLIASLKKI 69

Query: 490 PQTGCRVNPYKIPLPHPLI---QDS-EICLIIDDRPXXXXXXXXXXXKVQNDGIXXXXXX 323
           PQT  R N Y+IPLPHPLI   +DS E+CLIIDDRP           K++++ I      
Sbjct: 70  PQTS-RTNAYRIPLPHPLINPTEDSPELCLIIDDRPKSGLTKADVMKKIKSENIPITKVI 128

Query: 322 XXXXXXSDYKPFEAKRKLCDSYDMFFAAKGVIXXXXXXXXXXXXXXXXXXXPIDLTHKNW 143
                 +DYK FEAKRKLCDSYDMFFA + +I                    IDL HKNW
Sbjct: 129 KLSKLKTDYKAFEAKRKLCDSYDMFFADRRIIPLLPRVIGKKFFTSKKIPVAIDLKHKNW 188

Query: 142 KEQIERACGSGLFYIKSGTCSVVKIGRXXXXXXXXXXXXXEGINGVI 2
           K+QIE+ACGS +F+I++GTCSV+K+G+               +NGV+
Sbjct: 189 KQQIEKACGSAMFFIRTGTCSVIKVGKLSMELNEIIENVMATLNGVV 235


>ref|XP_002318802.1| predicted protein [Populus trichocarpa] gi|222859475|gb|EEE97022.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  158 bits (399), Expect = 1e-36
 Identities = 88/210 (41%), Positives = 111/210 (52%), Gaps = 5/210 (2%)
 Frame = -1

Query: 619 TPETISSAVXXXXXXXXXXXXXXXAQLLPQEEFFYLTLTLKHIPQTGC-RVNPYKIPLP- 446
           +P+T+  AV                QLL  +EF YL LTLK IP  G  R+N +KIPLP 
Sbjct: 10  SPKTVEKAVNALLKWRSSKLNTQKPQLLEHDEFVYLILTLKKIPHKGVSRINAHKIPLPC 69

Query: 445 ---HPLIQDSEICLIIDDRPXXXXXXXXXXXKVQNDGIXXXXXXXXXXXXSDYKPFEAKR 275
              +PL +  E+CLIIDDRP           K+QND I            +DY+PFEAKR
Sbjct: 70  PLTNPLTEAPELCLIIDDRPKSGLNKDAAKKKIQNDNIPISKIIKISKLKTDYRPFEAKR 129

Query: 274 KLCDSYDMFFAAKGVIXXXXXXXXXXXXXXXXXXXPIDLTHKNWKEQIERACGSGLFYIK 95
           KLCDSYDMFFA K V+                    +DL H+NWKEQI++ACGS L +++
Sbjct: 130 KLCDSYDMFFADKRVVPLLPKMLGKQFFKKKKIPMTLDLKHQNWKEQIDKACGSALLFLR 189

Query: 94  SGTCSVVKIGRXXXXXXXXXXXXXEGINGV 5
           +GTCSVVK+GR               ING+
Sbjct: 190 TGTCSVVKVGRISMSREEISKNVMAAINGI 219


>ref|NP_191425.1| ribosomal protein L1p/L10e family protein [Arabidopsis thaliana]
           gi|7630061|emb|CAB88283.1| putative protein [Arabidopsis
           thaliana] gi|17979349|gb|AAL49900.1| unknown protein
           [Arabidopsis thaliana] gi|332646291|gb|AEE79812.1|
           ribosomal protein L1p/L10e family protein [Arabidopsis
           thaliana]
          Length = 446

 Score =  155 bits (393), Expect = 7e-36
 Identities = 86/214 (40%), Positives = 115/214 (53%), Gaps = 4/214 (1%)
 Frame = -1

Query: 631 TTRVTPETISSAVXXXXXXXXXXXXXXXAQLLPQEEFFYLTLTLKHIPQTGCRVNPYKIP 452
           T+RV+P+T+ SA+                QLL ++E  YL +TLK IPQ   R N Y+IP
Sbjct: 21  TSRVSPKTVESALNGLINWRSDKSKTEKPQLLEEDELVYLFVTLKKIPQK-TRTNAYRIP 79

Query: 451 LPHPLIQDS----EICLIIDDRPXXXXXXXXXXXKVQNDGIXXXXXXXXXXXXSDYKPFE 284
           LPHPLI  +    EICLIIDDRP           K++++ I            SDYK FE
Sbjct: 80  LPHPLINPTVDSPEICLIIDDRPKSGLTKDDAMKKIKSENIPITKVIKLSKLKSDYKAFE 139

Query: 283 AKRKLCDSYDMFFAAKGVIXXXXXXXXXXXXXXXXXXXPIDLTHKNWKEQIERACGSGLF 104
           AKRKLCDSYDMFF  + +I                    +DL H+NWK QIE+ACGS +F
Sbjct: 140 AKRKLCDSYDMFFTDRRIIPLLPRVIGKKFFTSKKIPVALDLKHRNWKHQIEKACGSAMF 199

Query: 103 YIKSGTCSVVKIGRXXXXXXXXXXXXXEGINGVI 2
           +I++GTCSV+K+G+               +NG++
Sbjct: 200 FIRTGTCSVIKVGKLSMDICEITENVMATLNGLV 233


>ref|XP_004159957.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal L1 domain-containing
           protein 1-like [Cucumis sativus]
          Length = 364

 Score =  153 bits (386), Expect = 4e-35
 Identities = 90/191 (47%), Positives = 107/191 (56%), Gaps = 1/191 (0%)
 Frame = -1

Query: 631 TTRVTPETISSAVXXXXXXXXXXXXXXXAQLLPQEEFFYLTLTLKHIPQTGCRVNPYKIP 452
           TT+V  ET + AV                QL  QE+F YL +TLK IP  G R NPYKIP
Sbjct: 9   TTKVRRETAAKAVESLLQWRNSKREKP--QLFDQEDFLYLIVTLKKIPPKG-RTNPYKIP 65

Query: 451 LPHPLIQDS-EICLIIDDRPXXXXXXXXXXXKVQNDGIXXXXXXXXXXXXSDYKPFEAKR 275
           LPH L  DS E+CLIIDDR            K+Q++ I            SDY+PFEAKR
Sbjct: 66  LPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKR 125

Query: 274 KLCDSYDMFFAAKGVIXXXXXXXXXXXXXXXXXXXPIDLTHKNWKEQIERACGSGLFYIK 95
           KLCDSYDMFFA   VI                   P++L HKNWKEQ+ER+C SGL Y++
Sbjct: 126 KLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSGLLYLR 185

Query: 94  SGTCSVVKIGR 62
           +GTCSVVK+ R
Sbjct: 186 TGTCSVVKVAR 196


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