BLASTX nr result

ID: Cnidium21_contig00019724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019724
         (1384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521526.1| Sec14 cytosolic factor, putative [Ricinus co...    55   3e-10
ref|NP_565514.1| SEC14-like 3 protein [Arabidopsis thaliana] gi|...    41   2e-07
ref|NP_001189571.1| SEC14-like 3 protein [Arabidopsis thaliana] ...    41   7e-07
ref|XP_002880389.1| hypothetical protein ARALYDRAFT_481021 [Arab...    41   9e-07
ref|NP_179410.1| sec.4-like phosphatidylinositol transfer-like p...    42   1e-06

>ref|XP_002521526.1| Sec14 cytosolic factor, putative [Ricinus communis]
            gi|223539204|gb|EEF40797.1| Sec14 cytosolic factor,
            putative [Ricinus communis]
          Length = 547

 Score = 55.1 bits (131), Expect(2) = 3e-10
 Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
 Frame = -3

Query: 1334 DPMMIQMVRSGAHNCSQKKNSISFDV*TVSEANLLLKR*PQK--NKVQIITMAVYLWWTR 1161
            D  +++MV++G H C++K  S   D  T S+ + +  +   K  +   II   V + W +
Sbjct: 324  DQEILKMVQNGDHKCTKKCESQIPDEKTASDDDTVFSKVSSKFEDYGPIIEKTVDMTWKQ 383

Query: 1160 LSIRLGQNLCKMTDLPSP*DCCKPSDGIRSHTINEMMSFLIGIAAMVRLT*NVPKKLTAA 981
            L+      L K  D  +  D  K S+G  S     +M+F++GI  M+++T N+P+KLT A
Sbjct: 384  LAEDEKYTLTK-ADCYANYDGSKVSEG-GSPIFTGVMAFVMGIVTMIKVTRNMPRKLTNA 441

Query: 980  TLCSSSIPENEA 945
            T+ SSS+  +EA
Sbjct: 442  TIYSSSVYCDEA 453



 Score = 37.0 bits (84), Expect(2) = 3e-10
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = -1

Query: 1384 EKGGCMLSDKGPWNDPEIL 1328
            ++GGCM SDKGPW D EIL
Sbjct: 310  DQGGCMRSDKGPWKDQEIL 328


>ref|NP_565514.1| SEC14-like 3 protein [Arabidopsis thaliana]
            gi|79322670|ref|NP_001031389.1| SEC14-like 3 protein
            [Arabidopsis thaliana] gi|16209642|gb|AAL14382.1|
            At2g21540/F2G1.19 [Arabidopsis thaliana]
            gi|20197914|gb|AAM15309.1| putative phosphatidylinositol
            phophatidylcholine transfer protein [Arabidopsis
            thaliana] gi|51970982|dbj|BAD44183.1| putative
            phosphatidylinositol/ phophatidylcholine transfer protein
            [Arabidopsis thaliana] gi|330252098|gb|AEC07192.1|
            SEC14-like 3 protein [Arabidopsis thaliana]
            gi|330252099|gb|AEC07193.1| SEC14-like 3 protein
            [Arabidopsis thaliana]
          Length = 548

 Score = 41.2 bits (95), Expect(2) = 2e-07
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -1

Query: 1384 EKGGCMLSDKGPWNDPEI 1331
            +KGGCM SDKGPWNDP+I
Sbjct: 311  DKGGCMRSDKGPWNDPDI 328



 Score = 41.2 bits (95), Expect(2) = 2e-07
 Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 16/145 (11%)
 Frame = -3

Query: 1334 DPMMIQMVRSGAHNCSQK------KNSISFDV*TVSEANLLLKR*PQKNKVQII-----T 1188
            DP + +MV++G   C +K      + +IS D  T  +++   K        + I     T
Sbjct: 325  DPDIFKMVQNGEGKCPRKTLSNIEEKTISVDENTTMKSDSFAKNKFDAENTKFIPMIDKT 384

Query: 1187 MAVYLWWTRLSIRLGQNLCKMTDLPSP*D---CCKPSD--GIRSHTINEMMSFLIGIAAM 1023
            +    W T L           ++ P P D     KPS   G   +    +MS ++G+  +
Sbjct: 385  VNASTWPTNLH---------KSNYPEPEDLYSAVKPSQRRGGEGYLFGGVMSLVMGLMTV 435

Query: 1022 VRLT*NVPKKLTAATLCSSSIPENE 948
            VRLT N+P+KLT A +    + + E
Sbjct: 436  VRLTKNMPRKLTEAAIYGGEVDKAE 460


>ref|NP_001189571.1| SEC14-like 3 protein [Arabidopsis thaliana]
            gi|330252100|gb|AEC07194.1| SEC14-like 3 protein
            [Arabidopsis thaliana]
          Length = 542

 Score = 41.2 bits (95), Expect(2) = 7e-07
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -1

Query: 1384 EKGGCMLSDKGPWNDPEI 1331
            +KGGCM SDKGPWNDP+I
Sbjct: 311  DKGGCMRSDKGPWNDPDI 328



 Score = 39.7 bits (91), Expect(2) = 7e-07
 Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 11/140 (7%)
 Frame = -3

Query: 1334 DPMMIQMVRSGAHNCSQKKNSISFDV*TVS-EANLLLKR*PQKNKVQII-----TMAVYL 1173
            DP + +MV++G   C +K  S + +  T+S + N  +K        + I     T+    
Sbjct: 325  DPDIFKMVQNGEGKCPRKTLS-NIEEKTISVDENTTMKNKFDAENTKFIPMIDKTVNAST 383

Query: 1172 WWTRLSIRLGQNLCKMTDLPSP*D---CCKPSD--GIRSHTINEMMSFLIGIAAMVRLT* 1008
            W T L           ++ P P D     KPS   G   +    +MS ++G+  +VRLT 
Sbjct: 384  WPTNLH---------KSNYPEPEDLYSAVKPSQRRGGEGYLFGGVMSLVMGLMTVVRLTK 434

Query: 1007 NVPKKLTAATLCSSSIPENE 948
            N+P+KLT A +    + + E
Sbjct: 435  NMPRKLTEAAIYGGEVDKAE 454


>ref|XP_002880389.1| hypothetical protein ARALYDRAFT_481021 [Arabidopsis lyrata subsp.
            lyrata] gi|297326228|gb|EFH56648.1| hypothetical protein
            ARALYDRAFT_481021 [Arabidopsis lyrata subsp. lyrata]
          Length = 548

 Score = 41.2 bits (95), Expect(2) = 9e-07
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -1

Query: 1384 EKGGCMLSDKGPWNDPEI 1331
            +KGGCM SDKGPWNDP+I
Sbjct: 311  DKGGCMRSDKGPWNDPDI 328



 Score = 39.3 bits (90), Expect(2) = 9e-07
 Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 16/136 (11%)
 Frame = -3

Query: 1334 DPMMIQMVRSGAHNCSQK------KNSISFDV*TVSEANLLLKR*PQKNKVQII-----T 1188
            DP + +MV++G   C +K      + +IS D  T  + +   K        + I     T
Sbjct: 325  DPDIFKMVQNGEGKCPRKTLSNIEEKTISVDENTTMKCDSFAKNNFDAENAKFIPMIDKT 384

Query: 1187 MAVYLWWTRLSIRLGQNLCKMTDLPSP*D---CCKPSD--GIRSHTINEMMSFLIGIAAM 1023
            +    W T L           ++ P P D     KPS   G   +    +MS ++G+  +
Sbjct: 385  VNATTWPTNLH---------KSNYPEPEDLYSAVKPSQRRGGEGYLFGGVMSLMMGLMTV 435

Query: 1022 VRLT*NVPKKLTAATL 975
            VRLT N+P+KLT A +
Sbjct: 436  VRLTKNMPRKLTDAAI 451


>ref|NP_179410.1| sec.4-like phosphatidylinositol transfer-like protein [Arabidopsis
            thaliana] gi|4874285|gb|AAD31348.1| putative
            phosphatidylinositol/phophatidylcholine transfer protein
            [Arabidopsis thaliana] gi|330251641|gb|AEC06735.1|
            sec.4-like phosphatidylinositol transfer-like protein
            [Arabidopsis thaliana]
          Length = 558

 Score = 42.0 bits (97), Expect(2) = 1e-06
 Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
 Frame = -3

Query: 1334 DPMMIQMVRSGAHNCSQKKNSISFDV*TVSEAN-LLLKR*P-----QKNKVQIITMAVYL 1173
            +P +++ V +G H CS++  + +     +S+ N   ++  P     Q +  Q + +A   
Sbjct: 311  NPDIMKRVNNGDHICSKRSQADNAGENIISQGNNSAVEEAPETDQSQPSPCQNVVVAHPA 370

Query: 1172 W---------WTRLSIRLGQNLCKMTDLPSP*DCCKPSDGIRSHTINEMMSFLIGIAAMV 1020
            W          ++  +   Q  CK T+           +  RS     +M+F++G+  M+
Sbjct: 371  WNIPEAHKFSLSKRDVYAIQEACKATN-----------ESGRSPIFTGVMAFVMGVVTMI 419

Query: 1019 RLT*NVPKKLTAATLCSSSI 960
            R+T NVP+KLT +T+ SS +
Sbjct: 420  RVTKNVPRKLTESTIYSSPV 439



 Score = 38.1 bits (87), Expect(2) = 1e-06
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = -1

Query: 1384 EKGGCMLSDKGPWNDPEIL 1328
            + GGCM SDKGPWN+P+I+
Sbjct: 297  DNGGCMRSDKGPWNNPDIM 315


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