BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019714
         (2846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...  1067   0.0  
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   823   0.0  
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   801   0.0  
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   795   0.0  
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   660   0.0  

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 1067 bits (2760), Expect = 0.0
 Identities = 523/921 (56%), Positives = 666/921 (72%)
 Frame = +3

Query: 6    MHPNKAPGPDGMHALFFQKFWPLLGKDIILFVKSWSRGSVKLHDVNKTCVVLIPKCKNPK 185
            MHPNKAPG DG+HALFFQKFW +LG D+I FV+SW RG   L  VNKTC+VLIPKC +P+
Sbjct: 443  MHPNKAPGIDGLHALFFQKFWHILGSDVISFVQSWWRGMGDLGVVNKTCIVLIPKCDHPQ 502

Query: 186  WLTEFRPISCCNVLYKIISKTLANKLKPLLGDIISLHQSAFVPKRLITDNALIALEIFHA 365
             + +FRPIS C VLYKI+SKTLAN+LK +L  IIS +QSAFVP+RLITDNAL+A EIFHA
Sbjct: 503  SMKDFRPISLCTVLYKILSKTLANRLKVILPAIISPNQSAFVPRRLITDNALVAFEIFHA 562

Query: 366  MKRKNGGKDGTVALKLDMKKAYDRVEWSFLEQVMYKMGFCDSWVHRIIDCLSSVSFSFKI 545
            MKRK+  K+G  ALKLDM KAYDRVEW FLE+VM KMGFCD W+ R++ C+SSVSF+F +
Sbjct: 563  MKRKDANKNGVCALKLDMSKAYDRVEWCFLERVMKKMGFCDGWIDRVMACISSVSFTFNV 622

Query: 546  NGKISGSVLPSRGLRQGDPISPYLFICVAEAFSSLLSKAAIENHIHGVKVCHDAPRISHL 725
            NG + GS+ PSRGLRQGDPISPYLF+  A+AFS+LLSKAA E  IHG ++C  AP +SHL
Sbjct: 623  NGVVEGSLSPSRGLRQGDPISPYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSHL 682

Query: 726  FFADDSILFAKASVQECSVIADIISKYERASGQRVNLEKTDVVFSKNVSAIRRQEIVATL 905
            FFADDSILF KASVQECS++ADIISKYERASGQ+VNL KT+VVFS++V   RR  IV  L
Sbjct: 683  FFADDSILFTKASVQECSMVADIISKYERASGQQVNLSKTEVVFSRSVDRERRSAIVNVL 742

Query: 906  GVNEVAKHEKYLGLPTIIGKSKKVIFAGLKERIWKQIQGWKEKCMSRPGKETLIKGVVQS 1085
            GV EV + EKYLGLPTIIG+SKKV FA +KERIWK++QGWKEK +SRPGKE LIK V Q+
Sbjct: 743  GVKEVDRQEKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQA 802

Query: 1086 IPTYMMGVFKIPDGLLDEIHSMLAQFWWGSDGSTRKLHWHCWEDLCKPKSMGGMGFRDLK 1265
            IPTYMM VF +P GL+DEIHS+LA+FWWGS  + RK+HWH W+ LC PKSMGG+GFRDL 
Sbjct: 803  IPTYMMSVFSLPSGLIDEIHSLLARFWWGSSDTNRKMHWHSWDTLCYPKSMGGLGFRDLH 862

Query: 1266 VFNQALLAKQIWRLHTSTNSLLLSVLKARYFRNSPVLLAYRGYDPSYSWRSLWGAKSLLL 1445
             FNQ+LLAKQ WRL T   +LL  +L+ARYF++S +L A RGY+PS++WRS+WG+KSLLL
Sbjct: 863  CFNQSLLAKQAWRLCTGDQTLLYRLLQARYFKSSELLEARRGYNPSFTWRSIWGSKSLLL 922

Query: 1446 EGLSWRVGNGANIAVWSDSWLPGNSTIGEPLQSHLYDPDLMVNELIDMDYGGWSVQKIRN 1625
            EGL W VG+G  I VW D+W+ G      P      + DL V +LID+  G W+++ ++ 
Sbjct: 923  EGLKWCVGSGERIRVWEDAWILGEGAHMVPTPQADSNLDLKVCDLIDVARGAWNIESVQQ 982

Query: 1626 MFSDETSRKILSIPLSITMPQDKLFWWPSKYGEYSVKTGYLLGRLGRDQMCLLTSRDVNS 1805
             F +E    +LSIPLS  +P D  +WWPS+ G +SV++ Y LGRLG  +   L   +  +
Sbjct: 983  TFVEEEWELVLSIPLSRFLPDDHRYWWPSRNGIFSVRSCYWLGRLGPVRTWQLQHGERET 1042

Query: 1806 EVWRTVWGLDCPPKLRHFIWRACKGSLAVKENLFRRHIAQDAMCSCCDGEIESVIHVLFH 1985
            E+WR VW L  PPKL HF+WRACKGSLAVK  LF RHI+ DA CS C    ES+ H LF 
Sbjct: 1043 ELWRRVWQLQGPPKLSHFLWRACKGSLAVKGRLFSRHISVDATCSVCGDPDESINHALFD 1102

Query: 1986 CTMAKKVWEKSNFNGLFVAAPVSNFSDMVLWLSSKMGKTVLTSIMTMAWAVWFCRNKRVY 2165
            CT A+ +W+ S F  L + AP+S+FS+ + WL+    K    ++ +  WA WFCRNK ++
Sbjct: 1103 CTFARAIWQVSGFASLMMNAPLSSFSERLEWLAKHATKEEFRTMCSFMWAGWFCRNKLIF 1162

Query: 2166 EQIILDGPMIAAGFLKLNHDYGIYATRVLSGHTPLPPLSASRWTCPPSGLVKINIDAHIV 2345
            E  + D P++A  F KL  DY  YA  V  G +     S++ W+ PP+G+ K+N DAH+ 
Sbjct: 1163 ENELSDAPLVAKRFSKLVADYCEYAGSVFRG-SGGGCGSSALWSPPPTGMFKVNFDAHLS 1221

Query: 2346 SGLYVGLGVVIRGEFGQLLLTATKRLEVDWDSETAEAAATRYGLQIARRFGFENVWLDGD 2525
                VGLGVVIR   G + +   KR+   W +  AEA A  + +++A R GF  + L+GD
Sbjct: 1222 PNGEVGLGVVIRANDGGIKMLGVKRVAARWTAVMAEAMAALFAVEVAHRLGFGRIVLEGD 1281

Query: 2526 AMNVIRRVDKNPEGLSPICLIYDDICNLTSFFNVFVNSHVKRVGNSVAHLVARKPLIGSN 2705
            AM VI  V    EG++P+  I++DI +L +  +VF  SHV+R GN+VAHL+AR     ++
Sbjct: 1282 AMMVINAVKHKCEGVAPMFRIFNDISSLGACLDVFSVSHVRRAGNTVAHLLARWCCDCNS 1341

Query: 2706 ELICMSQFPQSIKALVELDLV 2768
            E++ +  FPQSI  L ELDL+
Sbjct: 1342 EIVWLDSFPQSISTLAELDLI 1362


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  823 bits (2127), Expect = 0.0
 Identities = 416/924 (45%), Positives = 589/924 (63%), Gaps = 5/924 (0%)
 Frame = +3

Query: 6    MHPNKAPGPDGMHALFFQKFWPLLGKDIILFVKSWSRGSVKLHDVNKTCVVLIPKCKNPK 185
            MHP KAPGPDGMHA+F+Q+FW ++G ++  FV S         +VN T + LIPK K+P 
Sbjct: 447  MHPCKAPGPDGMHAIFYQRFWHIIGDEVFNFVSSILHNYSCPGNVNCTNIALIPKVKSPT 506

Query: 186  WLTEFRPISCCNVLYKIISKTLANKLKPLLGDIISLHQSAFVPKRLITDNALIALEIFHA 365
             ++EFRPIS CNVLYKI SK +  +LK  L  I + +QSAFVP RLI+DN+LIALEIFH 
Sbjct: 507  VVSEFRPISLCNVLYKIASKAIVLRLKRFLPCIATENQSAFVPGRLISDNSLIALEIFHT 566

Query: 366  MKRKNGGKDGTVALKLDMKKAYDRVEWSFLEQVMYKMGFCDSWVHRIIDCLSSVSFSFKI 545
            MK++N  + G +A+KLDM KAYDRVEW FL +++  MGF   WV+ ++ C+++VS+SF I
Sbjct: 567  MKKRNNSRKGLMAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLVMSCVATVSYSFII 626

Query: 546  NGKISGSVLPSRGLRQGDPISPYLFICVAEAFSSLLSKAAIENHIHGVKVCHDAPRISHL 725
            NG++ GSV PSRGLRQGDP+SP+LFI VA+AFS ++ +  +   IHG K   + P ISHL
Sbjct: 627  NGRVCGSVTPSRGLRQGDPLSPFLFILVADAFSQMVKQKVVSKEIHGAKASRNGPEISHL 686

Query: 726  FFADDSILFAKASVQECSVIADIISKYERASGQRVNLEKTDVVFSKNVSAIRRQEIVATL 905
             FADDS+LF +A+ QEC  I DI++KYE ASGQ++N EK++V FS+ VS  +++E++  L
Sbjct: 687  LFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRGVSCEKKEELITLL 746

Query: 906  GVNEVAKHEKYLGLPTIIGKSKKVIFAGLKERIWKQIQGWKEKCMSRPGKETLIKGVVQS 1085
             + +V +H+KYLG+P + G+SKKV+F  L +R+WK+++GWKEK +SR GKE LIK V+Q+
Sbjct: 747  HMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQA 806

Query: 1086 IPTYMMGVFKIPDGLLDEIHSMLAQFWWGSDGSTRKLHWHCWEDLCKPKSMGGMGFRDLK 1265
            +PTY+MGV+K+P  ++ EIHS +A+FWWG  G  RK+HW  WE +CKPK MGGMGF+DL 
Sbjct: 807  LPTYLMGVYKLPVAVIQEIHSAMARFWWGGKGDERKMHWLSWEKMCKPKCMGGMGFKDLA 866

Query: 1266 VFNQALLAKQIWRLHTSTNSLLLSVLKARYFRNSPVLLAYRGYDPSYSWRSLWGAKSLLL 1445
            VFN ALL KQ+WRL  +  SLL  V+ A+Y+ +  V  A  GY  SYSWRS+WGAKSL+L
Sbjct: 867  VFNDALLGKQVWRLLHNKESLLSRVMSAKYYPHGDVRYARLGYSHSYSWRSIWGAKSLVL 926

Query: 1446 EGLSWRVGNGANIAVWSDSWLPGNSTIGEPLQSHLYDPDLMVNELIDMDYGGWSVQKIRN 1625
            EGL WRVG+G  I +WS  W+      G  ++S   +   +V +L+D++   W+V+ I  
Sbjct: 927  EGLIWRVGDGTKIDIWSAPWVGDEE--GRFIKSARVEGLEVVGDLMDVERKEWNVELIER 984

Query: 1626 MFSDETSRKILSIPLSITMPQDKLFWWPSKYGEYSVKTGYLLGRLGRDQMCLLTSRDVNS 1805
             F++   + IL+IPLS    QD+L W  SK G YSVKT Y+LG+ G        + D   
Sbjct: 985  HFNERDQQCILAIPLSTRCLQDELTWAYSKDGTYSVKTAYMLGKGG--------NLDDFH 1036

Query: 1806 EVWRTVWGLDCPPKLRHFIWRACKGSLAVKENLFRRHIAQDAMCSCCDGEIESVIHVLFH 1985
             VW  +W L+  PK+RHF+WRAC  SL V++ L RRH+  +A C CC  E E+  H+ + 
Sbjct: 1037 RVWNILWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAGCPCCAREDETQFHLFYR 1096

Query: 1986 CTMAKKVWEKSNFNGLFVAAP----VSNFSDMVLWLSSKMGKTVLTSIMTMAWAVWFCRN 2153
            C M+ K+WE+    G ++  P     +    +V W  S+M   V+     + W VW  RN
Sbjct: 1097 CPMSLKLWEEL---GSYILLPGIEDEAMCDTLVRW--SQMDAKVVQKGCYILWNVWVERN 1151

Query: 2154 KRVYEQIILDGPMIAAGFLKLNHDYGIYATRVLSGHTPLPPLSASRWTCPPSGLVKINID 2333
            +RV+E       ++    ++   D+  YA ++  G      LS SRW  PP G +K+N D
Sbjct: 1152 RRVFEHTSQPATVVGQRIMRQVEDFNNYAVKIYGGMRSSAALSPSRWYAPPVGAIKLNTD 1211

Query: 2334 AHIVSGLYVGLGVVIRGEFGQLLLTATKRLEVDWDSETAEAAATRYGLQIARRFGFENVW 2513
            A +    +VGLGV+ R   G++   AT+R+   W  E AE  A     ++A+  G+ +V 
Sbjct: 1212 ASLAEEGWVGLGVIARDSEGKVCFAATRRVRAYWPPEVAECKAIYMATRLAQAHGYGDVI 1271

Query: 2514 LDGDAMNVIRRVDKNPEGLSPICLIYDDICNLTSFFNVFVNSHVKRVGNSVAHLVARKPL 2693
             + D++   +R+ K     S +  I  DI ++ + F+    SHVKR GN+VAH +AR   
Sbjct: 1272 FESDSLVATKRLTKAAIFFSDLDAILGDILSMCNAFSSVSFSHVKRDGNTVAHNLARVVP 1331

Query: 2694 IGSNELICMSQF-PQSIKALVELD 2762
             G  +  C     P S+   V +D
Sbjct: 1332 FGVEQ--CWEHHCPSSVTPYVLMD 1353


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  801 bits (2068), Expect = 0.0
 Identities = 406/920 (44%), Positives = 571/920 (62%)
 Frame = +3

Query: 3    QMHPNKAPGPDGMHALFFQKFWPLLGKDIILFVKSWSRGSVKLHDVNKTCVVLIPKCKNP 182
            QMHP KAPGPDGMHA+F+QKFW ++G D+  FV S   GS+    +N T + LIPK KNP
Sbjct: 443  QMHPCKAPGPDGMHAIFYQKFWHIIGDDVTQFVSSILHGSISPSCINHTNIALIPKVKNP 502

Query: 183  KWLTEFRPISCCNVLYKIISKTLANKLKPLLGDIISLHQSAFVPKRLITDNALIALEIFH 362
                EFRPI+ CNV+YK++SK L  +LK  L  ++S +QSAFVP RLITDNALIA+E+FH
Sbjct: 503  TTPAEFRPIALCNVVYKLVSKALVIRLKDFLPRLVSENQSAFVPGRLITDNALIAMEVFH 562

Query: 363  AMKRKNGGKDGTVALKLDMKKAYDRVEWSFLEQVMYKMGFCDSWVHRIIDCLSSVSFSFK 542
            +MK +N  + GT+A+KLDM KAYDRVEW FL +++  MGF   WV+ I+ C+SSVS+SF 
Sbjct: 563  SMKHRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMSCVSSVSYSFI 622

Query: 543  INGKISGSVLPSRGLRQGDPISPYLFICVAEAFSSLLSKAAIENHIHGVKVCHDAPRISH 722
            ING + GSV P+RGLR GDP+SPYLFI +A+AFS ++ K   E  +HG K     P ISH
Sbjct: 623  INGGVCGSVTPARGLRHGDPLSPYLFILIADAFSKMIQKKVQEKQLHGAKASRSGPVISH 682

Query: 723  LFFADDSILFAKASVQECSVIADIISKYERASGQRVNLEKTDVVFSKNVSAIRRQEIVAT 902
            LFFAD S+LF +AS QEC++I +I++ YE+ASGQ++N +K++V FSK VS  +++E+   
Sbjct: 683  LFFADVSLLFTRASRQECAIIVEILNLYEQASGQKINYDKSEVSFSKGVSIAQKEELSNI 742

Query: 903  LGVNEVAKHEKYLGLPTIIGKSKKVIFAGLKERIWKQIQGWKEKCMSRPGKETLIKGVVQ 1082
            L + +V +H KYLG+P+I G+S+  IF  L +RIWK++QGWKEK +SR GKE L+K V+Q
Sbjct: 743  LQMKQVERHMKYLGIPSITGRSRTAIFDSLMDRIWKKLQGWKEKLLSRAGKEILLKSVIQ 802

Query: 1083 SIPTYMMGVFKIPDGLLDEIHSMLAQFWWGSDGSTRKLHWHCWEDLCKPKSMGGMGFRDL 1262
            +IPTY+MGV+K+P  ++ +IHS +A+FWWGS  + R++HW  W+ LC  K  GGMGFRDL
Sbjct: 803  AIPTYLMGVYKLPCSIIQKIHSAMARFWWGSSDTQRRIHWKNWDSLCTLKCFGGMGFRDL 862

Query: 1263 KVFNQALLAKQIWRLHTSTNSLLLSVLKARYFRNSPVLLAYRGYDPSYSWRSLWGAKSLL 1442
            +VFN ALL +Q WRL    +SLL  V+KA+Y+ N   L A  G   SYSWRS+W +K+LL
Sbjct: 863  RVFNDALLGRQAWRLVREPHSLLARVMKAKYYSNHDFLDAPLGVSTSYSWRSIWSSKALL 922

Query: 1443 LEGLSWRVGNGANIAVWSDSWLPGNSTIGEPLQSHLYDPDLMVNELIDMDYGGWSVQKIR 1622
             EG+ WR+GNG N+ +W D W+     +G  + S  +    MV+ELID D   W V  I 
Sbjct: 923  KEGMVWRIGNGTNVRIWEDPWV--LDELGRFITSEKHGNLNMVSELIDFDRMEWKVSLIE 980

Query: 1623 NMFSDETSRKILSIPLSITMPQDKLFWWPSKYGEYSVKTGYLLGRLGRDQMCLLTSRDVN 1802
             +F++   + ILSIPLS    +D+L W  +K   YSVKT Y+LG+ G        + D  
Sbjct: 981  TVFNERDIKCILSIPLSSLPLKDELTWAFTKNAHYSVKTAYMLGKGG--------NLDSF 1032

Query: 1803 SEVWRTVWGLDCPPKLRHFIWRACKGSLAVKENLFRRHIAQDAMCSCCDGEIESVIHVLF 1982
             + W  +W ++  PK++HF+WR    +L V+  L  RH+  D +C    GE ES  H +F
Sbjct: 1033 HQAWIDIWSMEVSPKVKHFLWRLGTNTLPVRSLLKHRHMLDDDLCPRGCGEPESQFHAIF 1092

Query: 1983 HCTMAKKVWEKSNFNGLFVAAPVSNFSDMVLWLSSKMGKTVLTSIMTMAWAVWFCRNKRV 2162
             C   + +W  S  +  F A          L  S  +  +V T    MAW +W  RN  V
Sbjct: 1093 GCPFIRDLWVDSGCDN-FRALTTDTAMTEALVNSHGLDASVRTKGAFMAWVLWSERNSIV 1151

Query: 2163 YEQIILDGPMIAAGFLKLNHDYGIYATRVLSGHTPLPPLSASRWTCPPSGLVKINIDAHI 2342
            + Q      ++ A   +L  ++G Y  R+          SA  W  PP  ++K+N+DA +
Sbjct: 1152 FNQSSTPPHILLARVSRLVEEHGTYTARIYPNRNCCAIPSARVWAAPPPEVIKLNVDASL 1211

Query: 2343 VSGLYVGLGVVIRGEFGQLLLTATKRLEVDWDSETAEAAATRYGLQIARRFGFENVWLDG 2522
             S  +VGL V+ R   G +L  A +++   W +E AEA A    L++ RR+GF  + ++ 
Sbjct: 1212 ASAGWVGLSVIARDSHGTVLFAAVRKVRAQWSAEIAEAKAIEMALRLGRRYGFAAIIVES 1271

Query: 2523 DAMNVIRRVDKNPEGLSPICLIYDDICNLTSFFNVFVNSHVKRVGNSVAHLVARKPLIGS 2702
            D   V+ R+ K    L+ + +I  +I +    F   + SHVKR  NSVAH +A+    G 
Sbjct: 1272 DCQVVVNRLSKQALYLADLDIILHNIFSSCINFPSVLWSHVKRDANSVAHHLAKLTPFGI 1331

Query: 2703 NELICMSQFPQSIKALVELD 2762
             E I  +  P  +   V +D
Sbjct: 1332 -EQIWENHVPPEVAPYVLMD 1350


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  795 bits (2054), Expect = 0.0
 Identities = 404/920 (43%), Positives = 570/920 (61%)
 Frame = +3

Query: 3    QMHPNKAPGPDGMHALFFQKFWPLLGKDIILFVKSWSRGSVKLHDVNKTCVVLIPKCKNP 182
            QMHP KAPGPDGMH +F+Q+FW ++G D+  F+ +   G      VN T + LIPK KNP
Sbjct: 443  QMHPCKAPGPDGMHVIFYQRFWHIVGDDVTSFISNILHGHSSPSCVNNTNIALIPKVKNP 502

Query: 183  KWLTEFRPISCCNVLYKIISKTLANKLKPLLGDIISLHQSAFVPKRLITDNALIALEIFH 362
                EFRPI+ CNVLYK++SK +  +LK  L +IIS +QSAFVP RLITDNALIA+E+FH
Sbjct: 503  TKAAEFRPIALCNVLYKLMSKAIVMRLKSFLPEIISENQSAFVPGRLITDNALIAMEVFH 562

Query: 363  AMKRKNGGKDGTVALKLDMKKAYDRVEWSFLEQVMYKMGFCDSWVHRIIDCLSSVSFSFK 542
            +MK +N  + GT+A+KLDM KAYDRVEW FL +++  MGF   WV+ I++ +SSV++SF 
Sbjct: 563  SMKNRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMEFVSSVTYSFI 622

Query: 543  INGKISGSVLPSRGLRQGDPISPYLFICVAEAFSSLLSKAAIENHIHGVKVCHDAPRISH 722
            ING + GSV+P+RGLRQGDP+SPYLFI VA+AFS ++ +   +  +HG K     P ISH
Sbjct: 623  INGSVCGSVVPARGLRQGDPLSPYLFIMVADAFSKMIQRKVQDKQLHGAKASRSGPEISH 682

Query: 723  LFFADDSILFAKASVQECSVIADIISKYERASGQRVNLEKTDVVFSKNVSAIRRQEIVAT 902
            LFFADDS+LF +A+ QEC++I DI+++YE ASGQ++N EK++V +S+ VS  ++ E+   
Sbjct: 683  LFFADDSLLFTRANRQECTIIVDILNQYELASGQKINYEKSEVSYSRGVSVSQKDELTNI 742

Query: 903  LGVNEVAKHEKYLGLPTIIGKSKKVIFAGLKERIWKQIQGWKEKCMSRPGKETLIKGVVQ 1082
            L + +V +HEKYLG+P+I G+SKK IF  L +RIWK++QGWKEK +SR GKE L+K V+Q
Sbjct: 743  LNMRQVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKLQGWKEKLLSRAGKEVLLKSVIQ 802

Query: 1083 SIPTYMMGVFKIPDGLLDEIHSMLAQFWWGSDGSTRKLHWHCWEDLCKPKSMGGMGFRDL 1262
            +IPTY+MGV+K P  ++ +I S +A+FWWGS  + RK+HW  W+ +C  K  GGMGF+DL
Sbjct: 803  AIPTYLMGVYKFPVFIIQKIQSAMARFWWGSSDTQRKIHWKNWDSMCNLKCFGGMGFKDL 862

Query: 1263 KVFNQALLAKQIWRLHTSTNSLLLSVLKARYFRNSPVLLAYRGYDPSYSWRSLWGAKSLL 1442
             +FN ALL +Q WRL     SLL  V+KA+YF N   L A  G+  SYSW S+W +K+LL
Sbjct: 863  TIFNDALLGRQAWRLTREPQSLLGRVMKAKYFPNCDFLNAPLGHSSSYSWSSIWSSKALL 922

Query: 1443 LEGLSWRVGNGANIAVWSDSWLPGNSTIGEPLQSHLYDPDLMVNELIDMDYGGWSVQKIR 1622
             EG+ WRVGNG+ I +WSD W+      G  L S  +     V+ELID D   W    + 
Sbjct: 923  KEGVIWRVGNGSQINMWSDPWVLDEG--GRFLTSTPHASIRWVSELIDFDRMEWKTSLLE 980

Query: 1623 NMFSDETSRKILSIPLSITMPQDKLFWWPSKYGEYSVKTGYLLGRLGRDQMCLLTSRDVN 1802
            +  ++   R IL+ PLS T   D+L W  +K   YSVKT Y++G+ G        + D  
Sbjct: 981  SFLNERDLRCILASPLSATPVPDELTWAFTKDATYSVKTAYMIGKGG--------NLDNF 1032

Query: 1803 SEVWRTVWGLDCPPKLRHFIWRACKGSLAVKENLFRRHIAQDAMCSCCDGEIESVIHVLF 1982
             + W  +W LD  PK+RHF+WR C  SL V+  L  RH+  D +C    GEIE+  H +F
Sbjct: 1033 HQAWVDIWSLDVSPKVRHFLWRLCTTSLPVRSLLKHRHLTDDDLCPWGCGEIETQRHAIF 1092

Query: 1983 HCTMAKKVWEKSNFNGLFVAAPVSNFSDMVLWLSSKMGKTVLTSIMTMAWAVWFCRNKRV 2162
             C   + +W  S    L       +  D+++   S  GK  +     +AW +W  RN ++
Sbjct: 1093 DCPKMRDLWLDSGCQNLCSRDASMSMCDLLVSWRSLDGKLRIKGAY-LAWCIWGERNAKI 1151

Query: 2163 YEQIILDGPMIAAGFLKLNHDYGIYATRVLSGHTPLPPLSASRWTCPPSGLVKINIDAHI 2342
            +        ++     +L  + G +A R+     P    S  +W  PP+  +K+N+DA +
Sbjct: 1152 FNNKTTPSSVLMQRVSRLVEENGSHARRIYQPLVPRRTGSPRQWIAPPADSIKLNVDASL 1211

Query: 2343 VSGLYVGLGVVIRGEFGQLLLTATKRLEVDWDSETAEAAATRYGLQIARRFGFENVWLDG 2522
                +VGL V+ R   G +L  A +R+   W  E AEA A    +++ RR+G + V L+ 
Sbjct: 1212 AVDGWVGLSVIARRSDGGVLFAAVRRVRAYWAPEIAEAKAVELAVKLGRRYGLQRVILES 1271

Query: 2523 DAMNVIRRVDKNPEGLSPICLIYDDICNLTSFFNVFVNSHVKRVGNSVAHLVARKPLIGS 2702
            D   VI R+ KN   LS + L+  +I    ++F+  V SHVKR GN VAH +A+    G 
Sbjct: 1272 DCQVVINRLSKNAIFLSDLDLVLFNILASCTYFSSVVWSHVKRDGNYVAHHLAKLIPFGV 1331

Query: 2703 NELICMSQFPQSIKALVELD 2762
             E +  + FP  +   V +D
Sbjct: 1332 -EQVWENHFPPEVAPYVLMD 1350


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  660 bits (1704), Expect = 0.0
 Identities = 359/923 (38%), Positives = 524/923 (56%), Gaps = 7/923 (0%)
 Frame = +3

Query: 6    MHPNKAPGPDGMHALFFQKFWPLLGKDIILFVKSWSRGSVKLHDVNKTCVVLIPKCKNPK 185
            M+P+K+PG DGM A FFQKFW ++G D++     +  G   + D N + + LIPK +NPK
Sbjct: 728  MNPSKSPGSDGMPARFFQKFWNIIGNDVVDVCLRFLNGDGSIADFNHSLIALIPKVQNPK 787

Query: 186  WLTEFRPISCCNVLYKIISKTLANKLKPLLGDIISLHQSAFVPKRLITDNALIALEIFHA 365
             +TE+RPIS CNV+YK++SK LAN+LK +L ++I+ +QSAF+ +R+I DN + A EI H 
Sbjct: 788  KVTEYRPISLCNVVYKLVSKVLANRLKSVLPEVIAENQSAFMSQRIIHDNIIAAFEIIHC 847

Query: 366  MKRKNGGKDGTVALKLDMKKAYDRVEWSFLEQVMYKMGFCDSWVHRIIDCLSSVSFSFKI 545
            +KR+       +ALKLDM KAYDRVEW FL+++M  MGF D +V  I+DC+ SV++S  +
Sbjct: 848  LKRRGKDSRQKIALKLDMTKAYDRVEWGFLQRMMEVMGFPDRFVFLIMDCVKSVTYSVLL 907

Query: 546  NGKISGSVLPSRGLRQGDPISPYLFICVAEAFSSLLSKAAIENHIHGVKVCHDAPRISHL 725
             G   G + PSRGLRQGDPISPYLF+ VAE  S+L+ KA  E  IHGV +   AP +SHL
Sbjct: 908  QGAPFGKIKPSRGLRQGDPISPYLFLIVAEGLSALIRKAEREQQIHGVAIARGAPSVSHL 967

Query: 726  FFADDSILFAKASVQECSVIADIISKYERASGQRVNLEKTDVVFSKNVSAIRRQEIVATL 905
            F+ADDS+LF  A+V +C  + +I S YE ASGQ++N +K+ + FS    A  ++   A L
Sbjct: 968  FYADDSLLFCDATVTDCMALKNIFSTYEAASGQKINKDKSAICFSPKSPAAIKEACSAIL 1027

Query: 906  GVNEVAKHEKYLGLPTIIGKSKKVIFAGLKERIWKQIQGWKEKCMSRPGKETLIKGVVQS 1085
             +  V  HE+YLGLPT+ GK KK +F  L +R+W ++ GW+ K +S+ GKE LIK V Q+
Sbjct: 1028 DMPVVPCHERYLGLPTVSGKDKKKLFQSLPDRVWNRVHGWEGKLLSKAGKEVLIKTVAQA 1087

Query: 1086 IPTYMMGVFKIPDGLLDEIHSMLAQFWWGSDGSTRKLHWHCWEDLCKPKSMGGMGFRDLK 1265
            IP Y M VF++P G  D I+  +A+FWWG +G  + +HW  W DLC  K  GG+GFRDL 
Sbjct: 1088 IPNYTMSVFQLPAGTSDAINKCVARFWWGKEGG-KGIHWRRWSDLCFSKKDGGLGFRDLS 1146

Query: 1266 VFNQALLAKQIWRLHTSTNSLLLSVLKARYFRNSPVLLAYRGYDPSYSWRS-LWGAKSLL 1442
            +FNQALL KQ WRL    +SL+  +LKA+YF     + A  G  PSY WRS LWG + LL
Sbjct: 1147 LFNQALLGKQGWRLMMYPDSLVARMLKAKYFPWDDFMEAELGSSPSYLWRSFLWG-RELL 1205

Query: 1443 LEGLSWRVGNGANIAVWSDSWLPGNSTIGEPLQSHLYDPDLMVNELIDMDYGGWSVQKIR 1622
             +G+ WR+G+G  + V+ D W+PG  +   P+        L V++L+  + GGW+++ + 
Sbjct: 1206 RKGVRWRIGDGKEVRVFIDPWVPGLPSF-RPILRQGAPLFLRVSDLLH-NNGGWNMEALN 1263

Query: 1623 NMFSDETSRKILSIPLSITMPQDKLFWWPSKYGEYSVKTGYLLG-RLGRDQMCLLTSRDV 1799
              F+D+    I SI +  T   D   W   K G Y+VK+GY L     R++   +     
Sbjct: 1264 YWFTDDECEAISSITVGATRRPDVYMWNYCKNGRYTVKSGYWLACEENREEAINIVLAPR 1323

Query: 1800 NSEVWRTVWGLDCPPKLRHFIWRACKGSLAVKENLFRRHIAQDAMCSCCDGEIESVIHVL 1979
            N   W+ +W L  PPK+ HF+WR   G +   E L  +HIA  A C  C    ES +H  
Sbjct: 1324 N--FWKHLWKLKLPPKINHFLWRCSMGFIPCMEVLLWKHIAHSASCFRCQQGRESPVHAT 1381

Query: 1980 FHCTMAKKVWEKSNFNGLFVAAPVSNFSDMVLWLSSKMGKTVLTSIMTMAWAVWFCRNKR 2159
            + C+    V+E++ F     +    +F  ++    S + K  L     + W  W  RN  
Sbjct: 1382 WGCSCCVAVFERAGFYSKLSSGQFPSFIHLLHHAFSTLDKEELQLFAVLLWLNWHERNNC 1441

Query: 2160 VYEQIILDGPMI---AAGFLK-LNHDYGIYATRVLSGHTPLPPLSASRWTCPPSGLVKIN 2327
             ++  ++   +I      FLK      G  A   +     + P S  RW  P SG +K+N
Sbjct: 1442 YHKGAVVPSDIIYENGVKFLKCFKEALGCRAGVEVKAVEEVVPGSLRRWQAPSSGQLKVN 1501

Query: 2328 ID-AHIVSGLYVGLGVVIRGEFGQLLLTATKRLEVDWDSETAEAAATRYGLQIARRFGFE 2504
             D A        G G +IR EFG L++   K  +    S  AE  A + GL +       
Sbjct: 1502 CDGAANFKDRCFGGGTIIRDEFGSLIVAGGKNFQHPVSSLVAELLAIKVGLDLVVERRLR 1561

Query: 2505 NVWLDGDAMNVIRRVDKNPEGLSPICLIYDDICNLTSFFNVFVNSHVKRVGNSVAHLVAR 2684
            N+ ++ D +  I  ++     L+P   + +DI N  +  N+    HV+R GN+ AH +A+
Sbjct: 1562 NIMVESDCLEAIHLLNSKERCLAPEGGLVEDIQNTMALVNISSIYHVRREGNTAAHAIAK 1621

Query: 2685 KPLIGSNELICMSQFPQSIKALV 2753
                 +   + +   P  + +L+
Sbjct: 1622 FVARNNGRYVWLEDGPDWLMSLI 1644