BLASTX nr result

ID: Cnidium21_contig00019709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019709
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526481.1| rac gtpase, putative [Ricinus communis] gi|2...   135   4e-30
ref|XP_002326847.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|NP_566024.1| Rac-like GTP-binding protein ARAC9 [Arabidopsis...   128   4e-28
ref|XP_002880130.1| hypothetical protein ARALYDRAFT_322132 [Arab...   128   4e-28
ref|XP_003539954.1| PREDICTED: rac-like GTP-binding protein RAC2...   127   7e-28

>ref|XP_002526481.1| rac gtpase, putative [Ricinus communis] gi|223534156|gb|EEF35872.1|
           rac gtpase, putative [Ricinus communis]
          Length = 202

 Score =  135 bits (339), Expect = 4e-30
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = -3

Query: 206 ASNVATTTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGKTINL 27
           A + ATTTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VDGKT+NL
Sbjct: 3   APSAATTTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVMVDGKTVNL 62

Query: 26  GLWDTAGQ 3
           GLWDTAGQ
Sbjct: 63  GLWDTAGQ 70


>ref|XP_002326847.1| predicted protein [Populus trichocarpa] gi|222835162|gb|EEE73597.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/63 (95%), Positives = 63/63 (100%)
 Frame = -3

Query: 191 TTTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGKTINLGLWDT 12
           TTTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWDT
Sbjct: 1   TTTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVDGQTVNLGLWDT 60

Query: 11  AGQ 3
           AGQ
Sbjct: 61  AGQ 63


>ref|NP_566024.1| Rac-like GTP-binding protein ARAC9 [Arabidopsis thaliana]
           gi|51701867|sp|Q9XGU0.1|RAC9_ARATH RecName:
           Full=Rac-like GTP-binding protein ARAC9; AltName:
           Full=GTPase protein ROP8; Flags: Precursor
           gi|5381420|gb|AAD42972.1|AF156896_1 rac-like protein
           ARAC9 [Arabidopsis thaliana] gi|20197030|gb|AAC27471.2|
           putative GTP-binding protein [Arabidopsis thaliana]
           gi|105829866|gb|ABF74706.1| At2g44690 [Arabidopsis
           thaliana] gi|330255362|gb|AEC10456.1| Rac-like
           GTP-binding protein ARAC9 [Arabidopsis thaliana]
          Length = 209

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/68 (86%), Positives = 65/68 (95%)
 Frame = -3

Query: 206 ASNVATTTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGKTINL 27
           +++ AT T FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF+ANV+VDGKT+NL
Sbjct: 9   STSSATATTFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANVLVDGKTVNL 68

Query: 26  GLWDTAGQ 3
           GLWDTAGQ
Sbjct: 69  GLWDTAGQ 76


>ref|XP_002880130.1| hypothetical protein ARALYDRAFT_322132 [Arabidopsis lyrata subsp.
           lyrata] gi|297325969|gb|EFH56389.1| hypothetical protein
           ARALYDRAFT_322132 [Arabidopsis lyrata subsp. lyrata]
          Length = 205

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/69 (86%), Positives = 64/69 (92%)
 Frame = -3

Query: 209 MASNVATTTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGKTIN 30
           +A+   T T FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VDGKT+N
Sbjct: 8   IATPSTTATTFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVDGKTVN 67

Query: 29  LGLWDTAGQ 3
           LGLWDTAGQ
Sbjct: 68  LGLWDTAGQ 76


>ref|XP_003539954.1| PREDICTED: rac-like GTP-binding protein RAC2-like [Glycine max]
          Length = 197

 Score =  127 bits (320), Expect = 7e-28
 Identities = 58/63 (92%), Positives = 62/63 (98%)
 Frame = -3

Query: 191 TTTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGKTINLGLWDT 12
           +TT+FIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVVDG T+NLGLWDT
Sbjct: 2   STTRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61

Query: 11  AGQ 3
           AGQ
Sbjct: 62  AGQ 64


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