BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019693
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40014.3| unnamed protein product [Vitis vinifera]              262   4e-68
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   262   4e-68
ref|XP_004160694.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   256   3e-66
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   256   3e-66
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   253   2e-65

>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  262 bits (670), Expect = 4e-68
 Identities = 130/168 (77%), Positives = 148/168 (88%)
 Frame = -1

Query: 659 QCRTIRLPFHMVDATYRVKEAKKQLFNENGKHPSNEEVAEATGLSMKRLETVLLTPKAPR 480
           Q RTIRLPFHMV+ATYRVKEA+KQL++ENG+HP+NEEVAEATGLSMKRL  VLLTPKAPR
Sbjct: 408 QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPR 467

Query: 479 SLDQKFGINQYMKPSEVISDPEAETSEELLIKQFMKKDLNTVLDTLNPREKQVVRWRFGL 300
           SLDQK GINQ +KPSEVI+DP+AET+EELLIKQFM++DL  VL++LNPREKQV+RWR+GL
Sbjct: 468 SLDQKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGL 527

Query: 299 EDGRMKTLQEIGEIMGVSRERVRQIESCAFXXXXXXXXXXXLHQYLVS 156
           EDGR KTLQEIGE+MGVSRER+RQIESCAF           L QYLVS
Sbjct: 528 EDGRTKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVS 575


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  262 bits (670), Expect = 4e-68
 Identities = 130/168 (77%), Positives = 148/168 (88%)
 Frame = -1

Query: 659 QCRTIRLPFHMVDATYRVKEAKKQLFNENGKHPSNEEVAEATGLSMKRLETVLLTPKAPR 480
           Q RTIRLPFHMV+ATYRVKEA+KQL++ENG+HP+NEEVAEATGLSMKRL  VLLTPKAPR
Sbjct: 411 QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPR 470

Query: 479 SLDQKFGINQYMKPSEVISDPEAETSEELLIKQFMKKDLNTVLDTLNPREKQVVRWRFGL 300
           SLDQK GINQ +KPSEVI+DP+AET+EELLIKQFM++DL  VL++LNPREKQV+RWR+GL
Sbjct: 471 SLDQKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGL 530

Query: 299 EDGRMKTLQEIGEIMGVSRERVRQIESCAFXXXXXXXXXXXLHQYLVS 156
           EDGR KTLQEIGE+MGVSRER+RQIESCAF           L QYLVS
Sbjct: 531 EDGRTKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVS 578


>ref|XP_004160694.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase sigma factor
           sigB-like [Cucumis sativus]
          Length = 286

 Score =  256 bits (654), Expect = 3e-66
 Identities = 126/168 (75%), Positives = 145/168 (86%)
 Frame = -1

Query: 659 QCRTIRLPFHMVDATYRVKEAKKQLFNENGKHPSNEEVAEATGLSMKRLETVLLTPKAPR 480
           Q RTIRLPFHMV+ATYRVKEA+KQL +ENG+HP ++E+AEA GLSMKRL  VL+TPKAPR
Sbjct: 119 QSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPR 178

Query: 479 SLDQKFGINQYMKPSEVISDPEAETSEELLIKQFMKKDLNTVLDTLNPREKQVVRWRFGL 300
           SL+QK GINQ +KPSEVISDPEAET E++LIKQFMK+DL  VLD+LNPREKQV+RWRFG+
Sbjct: 179 SLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGM 238

Query: 299 EDGRMKTLQEIGEIMGVSRERVRQIESCAFXXXXXXXXXXXLHQYLVS 156
           EDGRMKTLQEIGEIMGVSRER+RQIESCAF           L QY++S
Sbjct: 239 EDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS 286


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
           gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
           polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  256 bits (654), Expect = 3e-66
 Identities = 126/168 (75%), Positives = 145/168 (86%)
 Frame = -1

Query: 659 QCRTIRLPFHMVDATYRVKEAKKQLFNENGKHPSNEEVAEATGLSMKRLETVLLTPKAPR 480
           Q RTIRLPFHMV+ATYRVKEA+KQL +ENG+HP ++E+AEA GLSMKRL  VL+TPKAPR
Sbjct: 413 QSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPR 472

Query: 479 SLDQKFGINQYMKPSEVISDPEAETSEELLIKQFMKKDLNTVLDTLNPREKQVVRWRFGL 300
           SL+QK GINQ +KPSEVISDPEAET E++LIKQFMK+DL  VLD+LNPREKQV+RWRFG+
Sbjct: 473 SLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGM 532

Query: 299 EDGRMKTLQEIGEIMGVSRERVRQIESCAFXXXXXXXXXXXLHQYLVS 156
           EDGRMKTLQEIGEIMGVSRER+RQIESCAF           L QY++S
Sbjct: 533 EDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS 580


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
           gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
           rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  253 bits (646), Expect = 2e-65
 Identities = 128/168 (76%), Positives = 144/168 (85%)
 Frame = -1

Query: 659 QCRTIRLPFHMVDATYRVKEAKKQLFNENGKHPSNEEVAEATGLSMKRLETVLLTPKAPR 480
           Q RTIRLPFHMV+ATYRVKEA+KQL++ENG+HP +EEVAEA GLSMKRL  VLLTPKAPR
Sbjct: 402 QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPR 461

Query: 479 SLDQKFGINQYMKPSEVISDPEAETSEELLIKQFMKKDLNTVLDTLNPREKQVVRWRFGL 300
           SLDQK G+N  +KPSEVI+DPEAET+EELL+KQFMK+DL  VL+TLNPRE QVVRWRFGL
Sbjct: 462 SLDQKIGMNMDLKPSEVIADPEAETAEELLMKQFMKQDLEKVLNTLNPRETQVVRWRFGL 521

Query: 299 EDGRMKTLQEIGEIMGVSRERVRQIESCAFXXXXXXXXXXXLHQYLVS 156
           EDGRMKTLQEIGEIMGVSRER+RQIES AF           L QYL++
Sbjct: 522 EDGRMKTLQEIGEIMGVSRERIRQIESSAFRKLKNKKRTKQLKQYLLA 569