BLASTX nr result

ID: Cnidium21_contig00019651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019651
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534099.1| ring finger protein, putative [Ricinus commu...   214   3e-53
ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854...   212   2e-52
ref|XP_002522602.1| ring finger protein, putative [Ricinus commu...   195   2e-47
ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vit...   191   4e-46
ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like...   190   7e-46

>ref|XP_002534099.1| ring finger protein, putative [Ricinus communis]
            gi|223525847|gb|EEF28281.1| ring finger protein, putative
            [Ricinus communis]
          Length = 344

 Score =  214 bits (546), Expect = 3e-53
 Identities = 134/343 (39%), Positives = 184/343 (53%), Gaps = 36/343 (10%)
 Frame = -3

Query: 1167 LVVICFLVAFFFLICYFIILKRYRFRLNSLRRTFSRN-FDQDENIMNEDHGPEIIHPIWL 991
            ++++   +    L+C    + R R R+++  R+     F   E+ ++ED GP++ HPIW 
Sbjct: 1    MIIMGGFIGAAILVCILATILRARNRISTRSRSLPPIIFATQEDFLDEDQGPQLDHPIWY 60

Query: 990  INTVGLTQIVIDSIAIIKYKKGEGLVEETDCSICLSEFRDDESLRLLPKCSHAFHIACID 811
            INTVGL Q VIDSIA+ KYKK EGL+E T+CS+CL+EF++DESLRLLPKCSHAFHI CID
Sbjct: 61   INTVGLQQSVIDSIAVFKYKKDEGLIEGTECSVCLNEFQEDESLRLLPKCSHAFHIPCID 120

Query: 810  TWLRSHKNCPLCRAPIVVEASNVGLSTVETTNTDGSSAGEDNL-----------VVNSDS 664
            TWLRSHKNCPLCRAP++ +  +V +   E+T++D SS G               + NS  
Sbjct: 121  TWLRSHKNCPLCRAPVISDNFDVQVELPESTSSDLSSTGGSQTENSTNNSGLITISNSVG 180

Query: 663  SNGEDCDGAGXXXXXXXXXXXXXEPAGENTDKTLACVRN-----CDVGLENAKGEGGSQE 499
             +G D    G                   T    A + N      D+       +   Q 
Sbjct: 181  EDGTDEVRDGDDTNCALPIEDETIGGNSKTGLNFAVLGNHSRVQSDLVDTRLTIKAEMQP 240

Query: 498  VRRSVSLDSFSASMISIAVANIDPVKV----------VKHSKNKSLSR--------IYGV 373
            VRRS SLDS SA  I  +V  + P K           +KHSK+K++ +           +
Sbjct: 241  VRRSASLDSSSAMAIYSSVGKVIPGKHGENLDIQMVRLKHSKSKNVLKRGSNGNISFRKL 300

Query: 372  MKSSSFRHFSDKGHVSMKRTFSSTSRKWPKPGS-SKSHDSILP 247
            MKSSS  H   K  ++MKR+FSS+ +        S+S DSILP
Sbjct: 301  MKSSSISHALQKAPIAMKRSFSSSGKSSSSSSRLSRSQDSILP 343


>ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854068 [Vitis vinifera]
          Length = 372

 Score =  212 bits (540), Expect = 2e-52
 Identities = 140/345 (40%), Positives = 187/345 (54%), Gaps = 33/345 (9%)
 Frame = -3

Query: 1179 SPILLVVICFLVAFFFLI-CYFIILKRYRFRLNSLRRTFSRNFDQDENIMNEDHGPEIIH 1003
            SPIL+ ++C L A FF++ C  ++LK Y     S R          E+ ++E+  P + H
Sbjct: 35   SPILIFIVCTLGAVFFVVSCCTVVLKYYSGWNRSRRSDPPVQNHTHEDFIDEEQSPVVYH 94

Query: 1002 PIWLINTVGLTQIVIDSIAIIKYKKGEGLVEETDCSICLSEFRDDESLRLLPKCSHAFHI 823
            PIWLINTVGL Q VID I +IKY K EGL+E T+CS+CL EF +DESLRLLPKCSHAFH+
Sbjct: 95   PIWLINTVGLQQSVIDLITVIKYNKEEGLIEGTECSVCLGEFEEDESLRLLPKCSHAFHV 154

Query: 822  ACIDTWLRSHKNCPLCRAPIVVEASNVGLSTVETTNTDGSSAGEDNLVVNSDSSNG---E 652
             CIDTWLRSHKNCPLCRAPI+ E     L+ VE  + D S + ED  + NS++ +G    
Sbjct: 155  PCIDTWLRSHKNCPLCRAPIIHENVGSHLNAVEQDSND-SGSREDMEIDNSETHSGLGSS 213

Query: 651  DCDGAGXXXXXXXXXXXXXEPAGENTDKTLACVRN--------CDVGLENAKGEGGSQEV 496
            +    G                 E   K L  +           D+   +   E   + V
Sbjct: 214  EVGEGGTAEVGVGVLAVEEARTNEIVRKGLPYMNAGKYELRVLSDLVDNHRASEEQIEPV 273

Query: 495  RRSVSLDSFSASMISIAVANIDPVKVVKHSKNKSL-----------------SRIYGVMK 367
            RRSVS+D  +AS I +A+AN  PV+    S  +S+                 S +Y +MK
Sbjct: 274  RRSVSMDLSAASEIYLAMANAVPVEHEGTSDMRSVPGKKLNLEIVARQSCRNSSLYKLMK 333

Query: 366  SSSFRHFSDKGHVSMKRTFSS----TSRKWPKPGSSKSHDSILPL 244
            SSS      +G +SMK++ SS    +SR+      S+S DSILPL
Sbjct: 334  SSSIGCSLHRGPLSMKKSLSSFPMFSSRR------SRSRDSILPL 372


>ref|XP_002522602.1| ring finger protein, putative [Ricinus communis]
            gi|223538078|gb|EEF39689.1| ring finger protein, putative
            [Ricinus communis]
          Length = 378

 Score =  195 bits (496), Expect = 2e-47
 Identities = 115/276 (41%), Positives = 153/276 (55%), Gaps = 2/276 (0%)
 Frame = -3

Query: 1224 CSTKDEDGSDSNLPFSPILLVVICFLVAFFFLICYFIILKRYRF--RLNSLRRTFSRNFD 1051
            CS K    S         L+  +     FF + CY I  K Y    R  S +    RN  
Sbjct: 46   CSYKLPPPSTHRSISGKFLIAGLVLSSVFFLVFCYAIYYKFYSGSRRGRSSQPQDQRNET 105

Query: 1050 QDENIMNEDHGPEIIHPIWLINTVGLTQIVIDSIAIIKYKKGEGLVEETDCSICLSEFRD 871
              E  ++EDHGP + HP+W INT+GL   VI+SI++ KYK+G+GLVE TDCS+CL+EF +
Sbjct: 106  THEEFLDEDHGPILDHPVWYINTIGLQPSVINSISVCKYKRGDGLVEGTDCSVCLNEFEE 165

Query: 870  DESLRLLPKCSHAFHIACIDTWLRSHKNCPLCRAPIVVEASNVGLSTVETTNTDGSSAGE 691
            DE+LRLLPKCSHAFHI CIDTWLRSH NCPLCRAPIV   +N   +T     ++  S+GE
Sbjct: 166  DETLRLLPKCSHAFHIPCIDTWLRSHTNCPLCRAPIV---ANSARATSSEGTSESLSSGE 222

Query: 690  DNLVVNSDSSNGEDCDGAGXXXXXXXXXXXXXEPAGENTDKTLACVRNCDVGLENAKGEG 511
            +  +  S++    + +  G             E   ENT K    +            E 
Sbjct: 223  ETRIGVSENDQESERELEGGDGELRVGIEEEREVEDENTRKRSEFLNG---------EEE 273

Query: 510  GSQEVRRSVSLDSFSASMISIAVANIDPVKVVKHSK 403
            G Q +RRSVSLDS SA  IS A+ ++ PV+  ++S+
Sbjct: 274  GIQPIRRSVSLDSLSAFKISQALVSVCPVESDRNSR 309


>ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera]
          Length = 379

 Score =  191 bits (485), Expect = 4e-46
 Identities = 124/332 (37%), Positives = 178/332 (53%), Gaps = 20/332 (6%)
 Frame = -3

Query: 1179 SPILLVVICFLVAFFFLICYFIILKRY--RFRLNSLRRTFSRNFDQDENIMNEDHGPEII 1006
            SP L++ +  L   FF++  ++  K+Y  R RL+  R + +      ++ ++ED  P + 
Sbjct: 62   SPYLVICLSVLATTFFVVFLYVFYKKYYSRRRLSRRRNSQAPAEGAHDDFIDEDQEPVVD 121

Query: 1005 HPIWLINTVGLTQIVIDSIAIIKYKKGEGLVEETDCSICLSEFRDDESLRLLPKCSHAFH 826
            HPIW I TVGL   VI +I I KYK+G+GLVE T+CS+CL+EF +DE++RLLPKC+HAFH
Sbjct: 122  HPIWYIRTVGLQPSVISAITICKYKRGDGLVEGTECSVCLAEFEEDEAVRLLPKCNHAFH 181

Query: 825  IACIDTWLRSHKNCPLCRAPIVVEASNVGLSTVETTNTDGSSAGEDNLVVNSDSSNGEDC 646
            I CIDTWL SH NCP+CRA IV  +S  G  + E +  +     E  + +  +    E+ 
Sbjct: 182  IPCIDTWLSSHTNCPMCRAGIV--SSTAGAPSPEQSVENSGPLEEARVEIPENGGQFEEI 239

Query: 645  DGAGXXXXXXXXXXXXXEPAGENTDKTLACVRNCDVGLENAKGEGGS-QEVRRSVSLDSF 469
            +                   G   +  L  V N     E AK E    Q +RRSVS+DS 
Sbjct: 240  E-----------DEVCELRIGREEEGELGGVENERSSCEVAKEEVDEIQPMRRSVSMDSL 288

Query: 468  SASMISIAVANIDPVKVVKHS------KNKSL-----SRIYG------VMKSSSFRHFSD 340
            SASMIS+A+AN+ P K   +S        KS+      R+ G      +M+SSS      
Sbjct: 289  SASMISLALANVHPQKSNGNSDSQLANSKKSIMPIVPKRVGGNQSLVKLMESSSMGRILQ 348

Query: 339  KGHVSMKRTFSSTSRKWPKPGSSKSHDSILPL 244
             G  SMKR+FS + + +     ++   S+LPL
Sbjct: 349  SGSTSMKRSFSCSGKLF-LLRHNRRRSSVLPL 379


>ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like [Vitis vinifera]
          Length = 404

 Score =  190 bits (483), Expect = 7e-46
 Identities = 126/360 (35%), Positives = 183/360 (50%), Gaps = 34/360 (9%)
 Frame = -3

Query: 1221 STKDEDGSDSNLPFSPILLVVICFLVAFFFLICYFIILKRYRFRLNSLRRTFSRNFD-QD 1045
            ST D++ S +    SP +++ +  L  FF L+C+  I+ +Y        R+     D +D
Sbjct: 55   STLDQNDSPN---ISPYVIITVALLAGFFLLVCFNAIIVKYCCGWRRRNRSPPSESDGRD 111

Query: 1044 ENIMNEDHGPEIIHPIWLINTVGLTQIVIDSIAIIKYKKGEGLVEETDCSICLSEFRDDE 865
            E  ++E+ GP I HPIW I T GL Q +I+SI + KYK+GEGL+E T+CS+CLSEF++DE
Sbjct: 112  EEFLDENRGPAIDHPIWFITTAGLQQAIINSITVCKYKRGEGLIEGTECSVCLSEFQEDE 171

Query: 864  SLRLLPKCSHAFHIACIDTWLRSHKNCPLCRAPIVVEASNVGLSTVETTNTDGSSAGEDN 685
            +LRLLPKC+HAFHI CIDTWL SH NCPLCRA I+ +  N  L   E+ + +  S G + 
Sbjct: 172  TLRLLPKCNHAFHIPCIDTWLSSHTNCPLCRARIISDIVNPPL---ESNDQNSRSLGPNE 228

Query: 684  LVVNSDSSNGEDCD--------------GAGXXXXXXXXXXXXXEPAGENTDKTLACVRN 547
                 +SSN  + D              G G                G N++  +    N
Sbjct: 229  QTQMENSSNDTELDNNLVRSRGVYESTVGRGGTGELQILDDERTSKEGVNSNGDVVLEVN 288

Query: 546  CDVGLENAKGEGGSQEVRRSVSLDSFSASMISIAVA-------------------NIDPV 424
             +    N   +   Q VRRSVS+DS SA+ I   +A                     D  
Sbjct: 289  GN-SANNHVVDSEIQPVRRSVSMDSSSAATIFFGLAKFHADESKGNWVDETMDGRKFDSG 347

Query: 423  KVVKHSKNKSLSRIYGVMKSSSFRHFSDKGHVSMKRTFSSTSRKWPKPGSSKSHDSILPL 244
             V K  ++ + +  +  M S S      KG +SMKR+ +S   ++  P  ++S ++ILPL
Sbjct: 348  SVPK--RDVAYTSTFRQMGSPSIAQCLHKGPISMKRS-NSCGGRFFLPRHNRSTNAILPL 404


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