BLASTX nr result
ID: Cnidium21_contig00019648
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00019648
(1756 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR18786.1| class S F-box protein [Nicotiana alata] 100 1e-18
gb|AAT39293.1| Putative F-box-like protein, identical [Solanum d... 95 5e-17
gb|ABX82525.1| S-locus F-box-like protein b [Petunia integrifoli... 94 2e-16
ref|XP_003621561.1| F-box protein [Medicago truncatula] gi|87241... 93 3e-16
ref|XP_003621564.1| F-box protein [Medicago truncatula] gi|12436... 93 3e-16
>gb|ABR18786.1| class S F-box protein [Nicotiana alata]
Length = 388
Score = 100 bits (249), Expect = 1e-18
Identities = 95/340 (27%), Positives = 148/340 (43%), Gaps = 18/340 (5%)
Frame = -2
Query: 1638 LPDNVICLILCRVPVKSLIRFSCVSKHWFLRIYYSKFIAMHLKTRLGMNNHPLMCIAYND 1459
LP++V+ IL R VKSL+RF +SK W+ I S FI +HL N ++
Sbjct: 10 LPEDVVIYILSRFSVKSLLRFKFISKSWYTLIQSSTFINVHLNRSTITKNEFILFSRSFR 69
Query: 1458 INTAKSVYLLTTTGRRPFRILDIPTHYTFDSTYPEKINFYDFIKNMALAGSVNGIVCLSH 1279
I T +L+ + L++ D Y Y F + L G NG++ L+
Sbjct: 70 IETEGFKNVLSIISSDDYNDLNVVLQ-DLDLPYLTFTPNYHFNE---LVGPCNGLIVLTD 125
Query: 1278 SREMKYRFVALWNPTIS---LWKPIPLPVSHFRHDVIKGMSVGLGYDKVGDDYIIVRIVP 1108
++ + L+NP L P P S H G VG G+D +G+DY VRI
Sbjct: 126 DDDI----IVLFNPATKNYMLLPPSPFVCSKGYHRSFIG-GVGFGFDSIGNDYKFVRISE 180
Query: 1107 VCPPHFKEYTW------SRLEIYSAKTDSWKDL-ATDKFIP--FWPKLPNCNFIVDGVPY 955
V F + W ++E+Y ++DSW+DL D+ +P FW + + +G +
Sbjct: 181 V----FLDTYWGPEEREQKVEVYDLRSDSWRDLNHVDQQLPTIFWNQC--FEMLHNGAFH 234
Query: 954 WTGVDEFPEDLNNPYRQEMLGCIDPRTGLFKKVPYPEHVMNERTWVHPVKLKDSVATLIQ 775
W V + ++ C D T +F+ + PE + + + + TLI
Sbjct: 235 WYAVGDLTYEIL---------CFDFSTEIFRSMKMPESCNAYDGKRYSLAVVNESLTLIC 285
Query: 774 YPGEGCH----QIMVDLYELDENAAN--WTKKKIIGPLPL 673
YP Q +D++ + E N WTKK II PLP+
Sbjct: 286 YPSPDSEIDQTQNTMDIWIMMEYGVNESWTKKYIISPLPI 325
>gb|AAT39293.1| Putative F-box-like protein, identical [Solanum demissum]
Length = 384
Score = 95.1 bits (235), Expect = 5e-17
Identities = 72/234 (30%), Positives = 109/234 (46%), Gaps = 4/234 (1%)
Frame = -2
Query: 1638 LPDNVICLILCRVPVKSLIRFSCVSKHWFLRIYYSKFIAMHLKTRLGMNNHPLMCIAYND 1459
LPD +I IL R+P+KSL +F CVSK W I F+ H+K + + + +
Sbjct: 12 LPDELITEILLRLPIKSLSKFMCVSKSWLQLISSPAFVKNHIKLTANGKGYIYHRLIFRN 71
Query: 1458 INTAKSVYLLTTTGRRPFRILDIPTHYTFDSTYPEKINFYDFIKNMALA----GSVNGIV 1291
N F+ +P+ +T E + I+ L+ GSVNG++
Sbjct: 72 TND-------------DFKFCPLPSLFTKQQLIEELFDIVSPIERTTLSTHIVGSVNGLI 118
Query: 1290 CLSHSREMKYRFVALWNPTISLWKPIPLPVSHFRHDVIKGMSVGLGYDKVGDDYIIVRIV 1111
C +H R+ R +WNPTI+ K +P S+ D G+ G GYD+ DDY +V I
Sbjct: 119 CAAHVRQ---REAYIWNPTITKSKELPKSRSNLCSD---GIKCGFGYDESHDDYKVVFI- 171
Query: 1110 PVCPPHFKEYTWSRLEIYSAKTDSWKDLATDKFIPFWPKLPNCNFIVDGVPYWT 949
P H S + IYS +T+SW L D+ + +C F+ + + YWT
Sbjct: 172 -NYPSHHNHR--SVVNIYSLRTNSWTTL-HDQLQGIFLLNLHCRFVKEKL-YWT 220
>gb|ABX82525.1| S-locus F-box-like protein b [Petunia integrifolia subsp. inflata]
Length = 394
Score = 93.6 bits (231), Expect = 2e-16
Identities = 94/345 (27%), Positives = 149/345 (43%), Gaps = 23/345 (6%)
Frame = -2
Query: 1638 LPDNVICLILCRVPVKSLIRFSCVSKHWFLRIYYSKFIAMHLKTRLGMNNHPLM-CIAYN 1462
LP++V IL R PVK+L+RF +SK W I S FI +HL NN L+ +Y
Sbjct: 10 LPEDVAMYILSRFPVKALLRFKFISKTWSTLIESSTFINIHLNRATTTNNEFLLFSRSYR 69
Query: 1461 DINTA-KSVYLLTTTGRRPFRI-----LDIPTHYTFDSTYPEKINFYDFIKNMALAGSVN 1300
+ K+ + + G I LD+P + TF Y F K L G N
Sbjct: 70 EETEGFKNALSILSCGNDDDLIHTISDLDLP-YLTFTQRYL-------FNK---LVGPCN 118
Query: 1299 GIVCLSHSREMKYRFVALWNPTISLW---KPIPLPVSHFRHDVIKGMSVGLGYDKVGDDY 1129
G++ L+ + + L+NP ++ P P H +G VG G+D + DY
Sbjct: 119 GLIVLT-----DFEIIVLFNPATKIYMLIPPSPFVCPKGFHRSFRG-GVGFGFDSIVKDY 172
Query: 1128 IIVRIVPVCPPHFKEYTW------SRLEIYSAKTDSWKDL-ATDKFIPFWPKLPNCNFIV 970
+V I V FK+ W ++E+Y + DSW+DL D+ +P P +
Sbjct: 173 KLVAISEV----FKDSEWGTDEKEQKVEVYDMRIDSWRDLNHVDQQLPTVYYYPCFERLY 228
Query: 969 DGVPYWTGVDEFPEDLNNPYRQEMLGCIDPRTGLFKKVPYPEHVMNERTWVHPVKLKDSV 790
+G +W + N ++ D T +F + P + + + + +
Sbjct: 229 NGAFHWYAI--------NDRFDHVILSFDISTEIFHSIKMPATDKSSGGKKYALIVLNES 280
Query: 789 ATLIQYPGEGCH----QIMVDLYELDENAA--NWTKKKIIGPLPL 673
TLI YP C + +D++ ++E +WTKK II PLP+
Sbjct: 281 LTLICYPNPDCEMDPSKDSMDIWIMEEYGVYESWTKKYIIKPLPI 325
>ref|XP_003621561.1| F-box protein [Medicago truncatula] gi|87241468|gb|ABD33326.1|
Cyclin-like F-box; F-box protein interaction domain
[Medicago truncatula] gi|124361053|gb|ABN09025.1|
Cyclin-like F-box; F-box protein interaction domain
[Medicago truncatula] gi|355496576|gb|AES77779.1| F-box
protein [Medicago truncatula]
Length = 398
Score = 92.8 bits (229), Expect = 3e-16
Identities = 89/340 (26%), Positives = 150/340 (44%), Gaps = 16/340 (4%)
Frame = -2
Query: 1638 LPDNVICLILCRVPVKSLIRFSCVSKHWFLRIYYSKFIAMHLKTRLGMNNH-----PLMC 1474
+P++++ IL ++PVKSL RF CV K W + F++M K L N+ L+
Sbjct: 18 IPNDLVFSILSKLPVKSLNRFGCVRKSWSILFKNRYFMSMFRKNLLCKNHSYYKDTSLLQ 77
Query: 1473 IAYNDINTAKSVYLLTTTGRRPFRILDIPTHYTFDSTYPEKINFYDFIKNMALAGSVNGI 1294
+ I++ L + +G R + F+ PE +D + +GS+NGI
Sbjct: 78 LETVTIDSELKFVLYSLSGERYQNKTKLDWPNLFEEADPE----FDVVG----SGSINGI 129
Query: 1293 VCLSHSREMKYRFVALWNPTISLWKPIPLPV-SHFRHDVIKGMSVGLGYDKVGDDYIIVR 1117
+CL + R V WNPT +K +P+ + RH ++ G GY + D+Y ++R
Sbjct: 130 LCLVSKSQPNNR-VVFWNPTTDEFKIVPISLRESVRHVDVEITRHGFGYVSIADEYKLIR 188
Query: 1116 IVPVCP------PHFKEYTWSRL-EIYSAKTDSWKDLATDKFIPFWPKLPNCNFIVDGVP 958
V P ++ ++ EIYS +++SW++L +D +P+ +DG+
Sbjct: 189 QVMYNPKSDTDDSSLEDVSYDLFWEIYSLRSNSWRELHSD--VPY--DYREDGICLDGMC 244
Query: 957 YWTGVDEFPEDLNNPYRQEMLGCIDPRTGLFKKVPYPEHV---MNERTWVHPVKLKDSVA 787
+W G D + D + + L D F P P + + W V L +A
Sbjct: 245 HWLGEDGYDIDRVD---EVYLLSFDLSKEAFLITPIPSECDSRIFQMAWKDLVVLNGFIA 301
Query: 786 TLIQYPGEGCHQIMVDLYELDENAANWTKKKIIGPLPLSE 667
+ Y I + L E+ +WTK I+ PLP E
Sbjct: 302 LISHYKQNDTFHISI-LGEIGVK-ESWTKLYIVCPLPCIE 339
>ref|XP_003621564.1| F-box protein [Medicago truncatula] gi|124361057|gb|ABN09029.1|
Cyclin-like F-box; F-box protein interaction domain
[Medicago truncatula] gi|355496579|gb|AES77782.1| F-box
protein [Medicago truncatula]
Length = 410
Score = 92.8 bits (229), Expect = 3e-16
Identities = 89/340 (26%), Positives = 150/340 (44%), Gaps = 16/340 (4%)
Frame = -2
Query: 1638 LPDNVICLILCRVPVKSLIRFSCVSKHWFLRIYYSKFIAMHLKTRLGMNNH-----PLMC 1474
+P++++ IL ++PVKSL RF CV K W + F++M K L N+ L+
Sbjct: 18 IPNDLVFSILSKLPVKSLNRFGCVRKSWSILFKNRYFMSMFRKNLLCKNHSYYKDTSLLQ 77
Query: 1473 IAYNDINTAKSVYLLTTTGRRPFRILDIPTHYTFDSTYPEKINFYDFIKNMALAGSVNGI 1294
+ I++ L + +G R + F+ PE +D + +GS+NGI
Sbjct: 78 LETVTIDSELKFVLYSLSGERYQNKTKLDWPNLFEEADPE----FDVVG----SGSINGI 129
Query: 1293 VCLSHSREMKYRFVALWNPTISLWKPIPLPV-SHFRHDVIKGMSVGLGYDKVGDDYIIVR 1117
+CL + R V WNPT +K +P+ + RH ++ G GY + D+Y ++R
Sbjct: 130 LCLVSKSQPNNR-VVFWNPTTDEFKIVPISLRESVRHVDVEITRHGFGYVSIADEYKLIR 188
Query: 1116 IVPVCP------PHFKEYTWSRL-EIYSAKTDSWKDLATDKFIPFWPKLPNCNFIVDGVP 958
V P ++ ++ EIYS +++SW++L +D +P+ +DG+
Sbjct: 189 QVMYNPKSDTDDSSLEDVSYDLFWEIYSLRSNSWRELHSD--VPY--DYREDGICLDGMC 244
Query: 957 YWTGVDEFPEDLNNPYRQEMLGCIDPRTGLFKKVPYPEHV---MNERTWVHPVKLKDSVA 787
+W G D + D + + L D F P P + + W V L +A
Sbjct: 245 HWLGEDGYDIDRVD---EVYLLSFDLSKEAFLITPIPSECDSRIFQMAWKDLVVLNGFIA 301
Query: 786 TLIQYPGEGCHQIMVDLYELDENAANWTKKKIIGPLPLSE 667
+ Y I + L E+ +WTK I+ PLP E
Sbjct: 302 LISHYKQNDTFHISI-LGEIGVK-ESWTKLYIVCPLPCIE 339