BLASTX nr result

ID: Cnidium21_contig00019643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019643
         (1579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   558   e-156
ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   551   e-154
ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicag...   522   e-145
ref|XP_002518204.1| dead box ATP-dependent RNA helicase, putativ...   509   e-142
ref|XP_004163501.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   504   e-140

>ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Vitis vinifera]
            gi|296083755|emb|CBI23744.3| unnamed protein product
            [Vitis vinifera]
          Length = 788

 Score =  558 bits (1438), Expect = e-156
 Identities = 285/362 (78%), Positives = 318/362 (87%), Gaps = 2/362 (0%)
 Frame = +2

Query: 500  EEDTFDDGEFYAWNELRLHPLIMKSIYRLKFKEPTPIQKVCIPAAAHQGKDVIGAAETGS 679
            E D+ D+ EFY WNELRLHPL+MKSI+RL FK+PTPIQK CIPAAAHQGKDV+GA+ETGS
Sbjct: 145  EGDSVDEAEFYEWNELRLHPLLMKSIHRLGFKQPTPIQKACIPAAAHQGKDVVGASETGS 204

Query: 680  GKTLAFGLPILQRILEEREKADNVSTENSDAGAKIAARGFMRALIITPTRELALQVHDHL 859
            GKTLA GLPILQR+LEEREKA     ENS+   K A  G +RALIITPTRELALQV DHL
Sbjct: 205  GKTLALGLPILQRLLEEREKAAEPLAENSEE--KYAEGGILRALIITPTRELALQVTDHL 262

Query: 860  KEVAKDTNIRVVPIVGGMSTQKQERLLKARPEIVVGTPGRLWELMSGGQIHLVEMHSLSF 1039
            KEVAK TN+RVVPIVGGMST+KQERLLKARPEIVVGTPGRLWELMS G+ HLVE+HSLSF
Sbjct: 263  KEVAKGTNVRVVPIVGGMSTEKQERLLKARPEIVVGTPGRLWELMSRGEDHLVELHSLSF 322

Query: 1040 FVLDEADRMIENGHFHELQSIIDMLPGVMESVEGRSSHTQSCVTVSSFQRKKRQTLVFSA 1219
            FVLDEADRM+ENGHFHELQSIID+LP    S+E  S +T++C TVS+ QRKKRQT VFSA
Sbjct: 323  FVLDEADRMVENGHFHELQSIIDILPKTSGSMESLSQNTENCFTVSNIQRKKRQTFVFSA 382

Query: 1220 TIALSADFRKKLKRGSIKSK--LSDDLNSIENLSQRAGMRPTAAIFDLTNTSIMADRLEE 1393
            TIALSADFRKKLKRG+++SK  ++D LNSIE LS+RAGMRP AAI DLTN SIMA++LEE
Sbjct: 383  TIALSADFRKKLKRGALRSKQLMNDGLNSIETLSERAGMRPNAAIVDLTNASIMANKLEE 442

Query: 1394 SFIECREEDKDAYLYYILAVHGQGQTIVFCTSISALRHISSLLLILGINVYTLHGDMQQR 1573
            SFIECREEDKDAYLYYIL+VHGQG+TIVFCTSI+ALRH SSLL ILGINV+TLH  MQQR
Sbjct: 443  SFIECREEDKDAYLYYILSVHGQGRTIVFCTSIAALRHTSSLLRILGINVWTLHAQMQQR 502

Query: 1574 AR 1579
            AR
Sbjct: 503  AR 504



 Score = 70.9 bits (172), Expect = 9e-10
 Identities = 41/76 (53%), Positives = 51/76 (67%), Gaps = 11/76 (14%)
 Frame = +2

Query: 104 LDRLDSLPWHSSLPEFTSNDDTFSIVAGTNELDGGFLSLEEIDESAYGLEI--------- 256
           L+RL+SLPW+ SLP+    DD FS+  G++EL+GGFLSLEEIDES YGLEI         
Sbjct: 19  LERLESLPWNPSLPDV---DDPFSLFVGSDELEGGFLSLEEIDESEYGLEIHEPGPEDKK 75

Query: 257 --PKFDEELNSKKRKA 298
             PK  +   SKKRK+
Sbjct: 76  GNPK--QSKKSKKRKS 89


>ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Glycine max]
          Length = 810

 Score =  551 bits (1419), Expect = e-154
 Identities = 282/365 (77%), Positives = 313/365 (85%), Gaps = 2/365 (0%)
 Frame = +2

Query: 491  DLPEEDTFDDGEFYAWNELRLHPLIMKSIYRLKFKEPTPIQKVCIPAAAHQGKDVIGAAE 670
            D+ EED  D+ EFYAWNELRLHPL++K+I +L FKEPTPIQK CIPAAAHQGKDV+GAAE
Sbjct: 163  DIGEEDV-DETEFYAWNELRLHPLLLKAICKLGFKEPTPIQKACIPAAAHQGKDVVGAAE 221

Query: 671  TGSGKTLAFGLPILQRILEEREKADNVSTENSDAGAKIAARGFMRALIITPTRELALQVH 850
            TGSGKTLAFGLPILQR+LEEREKA N+  E  +   K A+ G +RALII PTRELALQV 
Sbjct: 222  TGSGKTLAFGLPILQRLLEEREKAGNMVGERGEEPEKYASTGLLRALIIAPTRELALQVT 281

Query: 851  DHLKEVAKDTNIRVVPIVGGMSTQKQERLLKARPEIVVGTPGRLWELMSGGQIHLVEMHS 1030
            DHLK VAK  N+RV PIVGG+  +KQERLLKA+PEIVVGTPGRLWELMS G+ HLVE+HS
Sbjct: 282  DHLKAVAKHINVRVTPIVGGILAEKQERLLKAKPEIVVGTPGRLWELMSAGEKHLVELHS 341

Query: 1031 LSFFVLDEADRMIENGHFHELQSIIDMLPGVMESVEGRSSHTQSCVTVSSFQRKKRQTLV 1210
            LSFFVLDEADRM++NGHF ELQSIIDMLP    S E  S H QSCVTVSS+QRKKRQTLV
Sbjct: 342  LSFFVLDEADRMVQNGHFKELQSIIDMLPMSNNSAEDNSQHVQSCVTVSSYQRKKRQTLV 401

Query: 1211 FSATIALSADFRKKLKRGSIKSK--LSDDLNSIENLSQRAGMRPTAAIFDLTNTSIMADR 1384
            FSAT+ALS+DFRKKLKRGSIK K  L+D LNSIE LS+RAGMR  AAI DLTN SI+A +
Sbjct: 402  FSATVALSSDFRKKLKRGSIKQKQSLTDGLNSIETLSERAGMRSNAAIIDLTNPSILATK 461

Query: 1385 LEESFIECREEDKDAYLYYILAVHGQGQTIVFCTSISALRHISSLLLILGINVYTLHGDM 1564
            LEESFIECREEDKDAYLYYIL VHGQG+TIVFCTSI+ALRHISS+L ILGINV+TLH  M
Sbjct: 462  LEESFIECREEDKDAYLYYILTVHGQGRTIVFCTSIAALRHISSILRILGINVWTLHAQM 521

Query: 1565 QQRAR 1579
            QQRAR
Sbjct: 522  QQRAR 526



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 38/65 (58%), Positives = 51/65 (78%)
 Frame = +2

Query: 101 QLDRLDSLPWHSSLPEFTSNDDTFSIVAGTNELDGGFLSLEEIDESAYGLEIPKFDEELN 280
           +LDRLDSLPW+S+LP+   +DD FS+  G+NEL+GGFLSLEEIDE+ YGL IP+ + +  
Sbjct: 27  ELDRLDSLPWNSALPQ-NDDDDAFSLFIGSNELEGGFLSLEEIDEAEYGLSIPEPEVDKR 85

Query: 281 SKKRK 295
             K+K
Sbjct: 86  KTKKK 90


>ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355497930|gb|AES79133.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 798

 Score =  522 bits (1344), Expect = e-145
 Identities = 266/366 (72%), Positives = 308/366 (84%), Gaps = 3/366 (0%)
 Frame = +2

Query: 491  DLPEEDTFDDGEFYAWNELRLHPLIMKSIYRLKFKEPTPIQKVCIPAAAHQGKDVIGAAE 670
            D  +E+  D+ E+YAWNELRLHP +MK+I++L FKEPTPIQK C+PAAAHQGKDVIGAAE
Sbjct: 149  DSVDEENIDETEYYAWNELRLHPRLMKAIHKLGFKEPTPIQKACVPAAAHQGKDVIGAAE 208

Query: 671  TGSGKTLAFGLPILQRILEEREKADNVSTENSDAGA-KIAARGFMRALIITPTRELALQV 847
            TGSGKTLAFGLPILQR+LEEREKA+++S  N +  A K A  G +R+LII PTRELALQV
Sbjct: 209  TGSGKTLAFGLPILQRLLEEREKAESISGVNGEEAAEKYATTGLLRSLIIAPTRELALQV 268

Query: 848  HDHLKEVAKDTNIRVVPIVGGMSTQKQERLLKARPEIVVGTPGRLWELMSGGQIHLVEMH 1027
              HLK VAK  N+RV  IVGG+  +KQERLLKARPEIVV TPGRLWELMS G+ HL+E+H
Sbjct: 269  AKHLKAVAKHINVRVTAIVGGILPEKQERLLKARPEIVVATPGRLWELMSSGEKHLIELH 328

Query: 1028 SLSFFVLDEADRMIENGHFHELQSIIDMLPGVMESVEGRSSHTQSCVTVSSFQRKKRQTL 1207
            SLSFFVLDEADRM+++GHF ELQSIIDMLP    S E  S   Q+CVTVSS Q+KKRQTL
Sbjct: 329  SLSFFVLDEADRMVQSGHFKELQSIIDMLPMSNISSEDNSKDAQNCVTVSSIQKKKRQTL 388

Query: 1208 VFSATIALSADFRKKLKRGSIKSK--LSDDLNSIENLSQRAGMRPTAAIFDLTNTSIMAD 1381
            VFSAT+ALSADFRKKLKRGSI+ K   +D L+SIE LS+RAGMRP AAI DLTN SI+A 
Sbjct: 389  VFSATVALSADFRKKLKRGSIQKKQLSTDGLDSIETLSERAGMRPNAAIIDLTNPSILAA 448

Query: 1382 RLEESFIECREEDKDAYLYYILAVHGQGQTIVFCTSISALRHISSLLLILGINVYTLHGD 1561
            ++EESFIEC E+DKDA+LYYIL VHGQG+TIVFCTSI+ALRHISS+L ILG+NV+TLH  
Sbjct: 449  KIEESFIECTEDDKDAHLYYILTVHGQGRTIVFCTSIAALRHISSILRILGVNVWTLHAQ 508

Query: 1562 MQQRAR 1579
            MQQRAR
Sbjct: 509  MQQRAR 514



 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 41/71 (57%), Positives = 51/71 (71%), Gaps = 6/71 (8%)
 Frame = +2

Query: 101 QLDRLDSLPWHSSLPEFTSNDD---TFSIVAGTNELDGGFLSLEEIDESAYGLEIP---K 262
           +LDR DSLPW+SS+P+   NDD   +FS+  G+NEL+GGFLSLEEIDE+ YGL IP    
Sbjct: 22  ELDRFDSLPWNSSIPQPDENDDNDASFSLFTGSNELEGGFLSLEEIDEAEYGLNIPDPEN 81

Query: 263 FDEELNSKKRK 295
            D + NSK  K
Sbjct: 82  HDRKHNSKPDK 92


>ref|XP_002518204.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223542800|gb|EEF44337.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 496

 Score =  509 bits (1312), Expect = e-142
 Identities = 261/340 (76%), Positives = 289/340 (85%), Gaps = 2/340 (0%)
 Frame = +2

Query: 491  DLPEEDTFDDGEFYAWNELRLHPLIMKSIYRLKFKEPTPIQKVCIPAAAHQGKDVIGAAE 670
            D  + ++ D+ EF+AWNELRLHPL+MKSIYRL FKEPTPIQK CIP AAHQGKDVIGAAE
Sbjct: 146  DDTDGESVDEAEFHAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPPAAHQGKDVIGAAE 205

Query: 671  TGSGKTLAFGLPILQRILEEREKADNVSTENSDAGAKIAARGFMRALIITPTRELALQVH 850
            TGSGKTLAFGLPILQR+LEER+KA N   E  +   K    G +RALIITPTRELALQV 
Sbjct: 206  TGSGKTLAFGLPILQRLLEERDKAANYLDEMGEEAEKYGPTGLLRALIITPTRELALQVT 265

Query: 851  DHLKEVAKDTNIRVVPIVGGMSTQKQERLLKARPEIVVGTPGRLWELMSGGQIHLVEMHS 1030
            DHLKE A   NI+VVPIVGGMST+KQERLLKARPEI+VGTPGRLWELMSGG+ HLVE+HS
Sbjct: 266  DHLKEAAMGINIKVVPIVGGMSTEKQERLLKARPEIIVGTPGRLWELMSGGESHLVELHS 325

Query: 1031 LSFFVLDEADRMIENGHFHELQSIIDMLPGVMESVEGRSSHTQSCVTVSSFQRKKRQTLV 1210
            LSFFVLDEADRMIENGHF ELQSIIDMLP    SVEG S +TQ+CVT+S+ QRKKRQT V
Sbjct: 326  LSFFVLDEADRMIENGHFRELQSIIDMLPMASGSVEGLSQNTQNCVTLSNLQRKKRQTFV 385

Query: 1211 FSATIALSADFRKKLKRGSIKSK--LSDDLNSIENLSQRAGMRPTAAIFDLTNTSIMADR 1384
            FSATIALS DFRKKLKRGS+K K   +D LNSIENLS+RAGMRP AAI DLTN SI+A +
Sbjct: 386  FSATIALSTDFRKKLKRGSLKPKQLTADGLNSIENLSERAGMRPNAAIIDLTNASILAHK 445

Query: 1385 LEESFIECREEDKDAYLYYILAVHGQGQTIVFCTSISALR 1504
            LEESFIECRE+DKDAYLYYIL+V    +TIVFCTSI+ALR
Sbjct: 446  LEESFIECREDDKDAYLYYILSVSWTSRTIVFCTSIAALR 485



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 37/69 (53%), Positives = 47/69 (68%)
 Frame = +2

Query: 92  DSEQLDRLDSLPWHSSLPEFTSNDDTFSIVAGTNELDGGFLSLEEIDESAYGLEIPKFDE 271
           +  +L+R DSL W+SSL E    DD FS   G++EL+GGFLSLEEIDE  YG EIPK ++
Sbjct: 27  EDPELERFDSLSWNSSLSE----DDPFSGFVGSHELEGGFLSLEEIDEVDYGFEIPKPEK 82

Query: 272 ELNSKKRKA 298
               KK K+
Sbjct: 83  GKTGKKLKS 91


>ref|XP_004163501.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like, partial
            [Cucumis sativus]
          Length = 784

 Score =  504 bits (1297), Expect = e-140
 Identities = 262/365 (71%), Positives = 300/365 (82%), Gaps = 2/365 (0%)
 Frame = +2

Query: 491  DLPEEDTFDDGEFYAWNELRLHPLIMKSIYRLKFKEPTPIQKVCIPAAAHQGKDVIGAAE 670
            D  E+D  D+ E+YAWNELRLHPL+MKSIY+L FKEPT IQK CIPAAA+QGKDV+GAAE
Sbjct: 183  DEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKEPTAIQKACIPAAAYQGKDVVGAAE 242

Query: 671  TGSGKTLAFGLPILQRILEEREKADNVSTENSDAGAKIAARGFMRALIITPTRELALQVH 850
            TGSGKTLAFGLPILQR L+EREK+  +S E      K A +  +RALIITPTRELALQV 
Sbjct: 243  TGSGKTLAFGLPILQRFLDEREKSGKMSEEKGVDAKKYAPKSLLRALIITPTRELALQVT 302

Query: 851  DHLKEVAKDTNIRVVPIVGGMSTQKQERLLKARPEIVVGTPGRLWELMSGGQIHLVEMHS 1030
            DHLK VA   +IRVVPIVGGMST+KQERLL+ RPE+VVGTPGRLWELMSGG+ HLVE+ +
Sbjct: 303  DHLKAVAVGIDIRVVPIVGGMSTEKQERLLRTRPEVVVGTPGRLWELMSGGEKHLVELEA 362

Query: 1031 LSFFVLDEADRMIENGHFHELQSIIDMLPGVMESVEGRSSHTQSCVTVSSFQRKKRQTLV 1210
            LSFFVLDEADRMIENGHF ELQSIIDMLP    S E   +   S  T  S QRKKRQTLV
Sbjct: 363  LSFFVLDEADRMIENGHFRELQSIIDMLPVTNGSAENLQNAENSLTTPIS-QRKKRQTLV 421

Query: 1211 FSATIALSADFRKKLKRGSIKSKLS--DDLNSIENLSQRAGMRPTAAIFDLTNTSIMADR 1384
            FSAT++LS+DFRKKLKR S K   S  D LNSIE LS+RAG+RP  A+ +LTNTS++A+ 
Sbjct: 422  FSATLSLSSDFRKKLKRVSSKPNQSGMDGLNSIEALSERAGIRPNVAVINLTNTSVLANN 481

Query: 1385 LEESFIECREEDKDAYLYYILAVHGQGQTIVFCTSISALRHISSLLLILGINVYTLHGDM 1564
            LEESFIECREEDKDAYLYYIL+V+GQG+TIVFCTSI+ALRHI++LL I+G+NV TLH   
Sbjct: 482  LEESFIECREEDKDAYLYYILSVYGQGRTIVFCTSIAALRHIAALLSIVGVNVLTLHAQR 541

Query: 1565 QQRAR 1579
            QQRAR
Sbjct: 542  QQRAR 546



 Score = 68.6 bits (166), Expect = 5e-09
 Identities = 33/56 (58%), Positives = 43/56 (76%)
 Frame = +2

Query: 101 QLDRLDSLPWHSSLPEFTSNDDTFSIVAGTNELDGGFLSLEEIDESAYGLEIPKFD 268
           + +RLDSLPW+SS+P     DDT S   G+N+L+GGFLSLEEIDE+ YG+ IP+ D
Sbjct: 26  EFERLDSLPWNSSIPI----DDTLSAFIGSNDLEGGFLSLEEIDEAEYGMVIPEPD 77


Top