BLASTX nr result

ID: Cnidium21_contig00019577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019577
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302837.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
emb|CBI28414.3| unnamed protein product [Vitis vinifera]               63   5e-08
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...    63   5e-08
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06

>ref|XP_002302837.1| predicted protein [Populus trichocarpa]
           gi|224147115|ref|XP_002336411.1| predicted protein
           [Populus trichocarpa] gi|222834932|gb|EEE73381.1|
           predicted protein [Populus trichocarpa]
           gi|222844563|gb|EEE82110.1| predicted protein [Populus
           trichocarpa]
          Length = 140

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/68 (52%), Positives = 45/68 (66%)
 Frame = +1

Query: 4   LEACAEQPEFTSAVHSNYMLNVLNNTSDTTEEMVGAIKTKHSDQESSRGQNLPDSPFTSQ 183
           L+   EQ EF+SA H NY  +VLNN S T+EE     +T  SDQ+S++G NLP+SPF S 
Sbjct: 73  LKLSGEQAEFSSAEHFNYWFDVLNNGS-TSEEKHRHTRTSCSDQDSNQGVNLPESPFASA 131

Query: 184 IAEEISTV 207
           I   ISTV
Sbjct: 132 IGSGISTV 139


>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 35/67 (52%), Positives = 43/67 (64%)
 Frame = +1

Query: 10  ACAEQPEFTSAVHSNYMLNVLNNTSDTTEEMVGAIKTKHSDQESSRGQNLPDSPFTSQIA 189
           A AEQ EF SA   NY+L VLNN S + +       T +++QESS+G NLP+SPF S I 
Sbjct: 464 AHAEQAEFPSAERLNYLLEVLNNGSTSEDR-----STNYNEQESSQGLNLPESPFASPIR 518

Query: 190 EEISTVT 210
             ISTVT
Sbjct: 519 NSISTVT 525


>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Vitis vinifera]
          Length = 572

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 35/67 (52%), Positives = 43/67 (64%)
 Frame = +1

Query: 10  ACAEQPEFTSAVHSNYMLNVLNNTSDTTEEMVGAIKTKHSDQESSRGQNLPDSPFTSQIA 189
           A AEQ EF SA   NY+L VLNN S + +       T +++QESS+G NLP+SPF S I 
Sbjct: 511 AHAEQAEFPSAERLNYLLEVLNNGSTSEDR-----STNYNEQESSQGLNLPESPFASPIR 565

Query: 190 EEISTVT 210
             ISTVT
Sbjct: 566 NSISTVT 572


>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/60 (51%), Positives = 41/60 (68%)
 Frame = +1

Query: 28  EFTSAVHSNYMLNVLNNTSDTTEEMVGAIKTKHSDQESSRGQNLPDSPFTSQIAEEISTV 207
           +F SA H NY  +VLNN S T+EE     +T  S+Q+S++G NLP+SPF S I + ISTV
Sbjct: 495 QFPSAEHFNYWFDVLNNGS-TSEEKHRHTRTNCSEQDSNQGVNLPESPFASAIGKGISTV 553


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