BLASTX nr result
ID: Cnidium21_contig00019562
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00019562
(1409 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus] 219 e-109
gb|ABA91220.1| retrotransposon protein, putative, unclassified [... 199 7e-98
emb|CAE04887.3| OSJNBa0042I15.9 [Oryza sativa Japonica Group] 201 6e-96
gb|AAD20307.1| copia-type pol polyprotein [Zea mays] 192 3e-95
gb|AAN40030.1| putative gag-pol polyprotein [Zea mays] 192 9e-95
>gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]
Length = 349
Score = 219 bits (559), Expect(2) = e-109
Identities = 108/175 (61%), Positives = 133/175 (76%)
Frame = -2
Query: 856 VEQPPGFVDQDLVDFVYLLFKALYGLKQAPRTWYDTLSEFLIENGFTRGVIDKTLFYKMH 677
+EQP GF D ++VY L KALYGLKQAPR WYDTLS FL+ENGF+RG ID TLF + H
Sbjct: 17 MEQPDGFEDPKHPEYVYKLDKALYGLKQAPRAWYDTLSTFLLENGFSRGKIDNTLFLRKH 76
Query: 676 KTDLILVQVYVDDIIFGSTNDSLCKRFAKLMQSKYEMSMMGELTFFLGLQVSQKQDGIFI 497
K ++ILVQ+YVDDIIFG+T +S+C++F+KLMQSKYE S+MGELTFFLGLQV Q GIFI
Sbjct: 77 KGNVILVQIYVDDIIFGATKESMCRKFSKLMQSKYETSLMGELTFFLGLQVKQSDKGIFI 136
Query: 496 CQSKYIRDLLKKYHFEDSAPVRTLMPXXXXXXXXXXXXKVDITSYRGMIGSLLIL 332
QSKY++DLLKK+ F + + ++T M V++TSYRGMIGSLL L
Sbjct: 137 NQSKYVKDLLKKFDFNECSSMKTPMAPPLKLNADPDGKSVNVTSYRGMIGSLLYL 191
Score = 204 bits (519), Expect(2) = e-109
Identities = 92/112 (82%), Positives = 105/112 (93%)
Frame = -1
Query: 338 YLTASRPDIMFATCLCARFQADPKESHLIAVKRIFRYLKGTPTLGIWYPKGTGFDLVGYT 159
YLTASRPDIMF+TCLCAR+QA+PKESHL AVKRIFRYLKGTP LG+WYPK +GFDL G++
Sbjct: 190 YLTASRPDIMFSTCLCARYQANPKESHLAAVKRIFRYLKGTPNLGLWYPKDSGFDLTGFS 249
Query: 158 DSDFAGCKIDRKSTSGSCQFLGRRLVSWHSKKQHSVSTSTAEAEYIAAGSCC 3
DS++AGCK+DRKST+GSCQ LG +LVSW SKKQHSVSTSTAEAEY+AAGSCC
Sbjct: 250 DSNYAGCKVDRKSTTGSCQLLGGKLVSWTSKKQHSVSTSTAEAEYVAAGSCC 301
>gb|ABA91220.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1860
Score = 199 bits (507), Expect(2) = 7e-98
Identities = 99/175 (56%), Positives = 121/175 (69%)
Frame = -2
Query: 856 VEQPPGFVDQDLVDFVYLLFKALYGLKQAPRTWYDTLSEFLIENGFTRGVIDKTLFYKMH 677
VEQPPGF D L + VY L KALYGLKQAPR WY+ L +FL++NGF G D TLF K
Sbjct: 1016 VEQPPGFEDPKLPNHVYKLHKALYGLKQAPRDWYECLRDFLLKNGFEIGKADTTLFTKKF 1075
Query: 676 KTDLILVQVYVDDIIFGSTNDSLCKRFAKLMQSKYEMSMMGELTFFLGLQVSQKQDGIFI 497
+DL + Q+YVDDIIFGSTN S C+ F+ +M ++EMSMMGELTFFLGLQV Q +G FI
Sbjct: 1076 MSDLFICQIYVDDIIFGSTNASFCEEFSSIMTKRFEMSMMGELTFFLGLQVKQALEGTFI 1135
Query: 496 CQSKYIRDLLKKYHFEDSAPVRTLMPXXXXXXXXXXXXKVDITSYRGMIGSLLIL 332
Q+KY++D+LKK+ ED+ P++T MP VD YR MIGSLL L
Sbjct: 1136 SQTKYVKDILKKFGMEDAKPIKTSMPTNGHLDLDDNGKCVDQKVYRSMIGSLLYL 1190
Score = 186 bits (471), Expect(2) = 7e-98
Identities = 83/112 (74%), Positives = 98/112 (87%)
Frame = -1
Query: 338 YLTASRPDIMFATCLCARFQADPKESHLIAVKRIFRYLKGTPTLGIWYPKGTGFDLVGYT 159
YL ASRPDIM + C+CARFQA+PKE HLIAVKRI RYL TP LG+WYPKG F+L+GY
Sbjct: 1189 YLCASRPDIMLSVCMCARFQAEPKECHLIAVKRILRYLVHTPNLGLWYPKGCDFELLGYF 1248
Query: 158 DSDFAGCKIDRKSTSGSCQFLGRRLVSWHSKKQHSVSTSTAEAEYIAAGSCC 3
DSD+AGCK+DRKST+G+CQFLGR LVSW SKKQ+S++ STAEA+Y+AAGSCC
Sbjct: 1249 DSDYAGCKVDRKSTTGTCQFLGRSLVSWSSKKQNSIALSTAEAKYVAAGSCC 1300
>emb|CAE04887.3| OSJNBa0042I15.9 [Oryza sativa Japonica Group]
Length = 1510
Score = 201 bits (511), Expect(2) = 6e-96
Identities = 100/175 (57%), Positives = 122/175 (69%)
Frame = -2
Query: 856 VEQPPGFVDQDLVDFVYLLFKALYGLKQAPRTWYDTLSEFLIENGFTRGVIDKTLFYKMH 677
VEQPPGF D L + VY L KALYGLKQAPR WY+ L +FL++NGF G D TLF K
Sbjct: 1120 VEQPPGFEDPKLPNHVYKLHKALYGLKQAPRAWYECLRDFLLKNGFEIGNADTTLFTKKF 1179
Query: 676 KTDLILVQVYVDDIIFGSTNDSLCKRFAKLMQSKYEMSMMGELTFFLGLQVSQKQDGIFI 497
K+DL + Q+YVDDIIFGSTN S C+ F+ +M ++EMSMMGELTFFL LQV Q Q+G FI
Sbjct: 1180 KSDLFICQIYVDDIIFGSTNASFCEEFSSIMTKRFEMSMMGELTFFLWLQVKQAQEGTFI 1239
Query: 496 CQSKYIRDLLKKYHFEDSAPVRTLMPXXXXXXXXXXXXKVDITSYRGMIGSLLIL 332
Q+KY++D+LKK+ ED+ P++T MP VD YR MIGSLL L
Sbjct: 1240 SQTKYVKDILKKFGMEDAKPIKTPMPTNGHLDLDDNGKCVDQKVYRSMIGSLLYL 1294
Score = 177 bits (450), Expect(2) = 6e-96
Identities = 80/112 (71%), Positives = 94/112 (83%)
Frame = -1
Query: 338 YLTASRPDIMFATCLCARFQADPKESHLIAVKRIFRYLKGTPTLGIWYPKGTGFDLVGYT 159
YL ASRPDIM + C+CARFQA+PKE HLIAVKRI RYL TP LG+WYPKG F+L+GY+
Sbjct: 1293 YLCASRPDIMLSVCMCARFQAEPKECHLIAVKRIQRYLVHTPNLGLWYPKGCDFELLGYS 1352
Query: 158 DSDFAGCKIDRKSTSGSCQFLGRRLVSWHSKKQHSVSTSTAEAEYIAAGSCC 3
DSD+AGCK+DRKS +G+CQFLG LVSW KKQ+S+ ST EAEY+AAGSCC
Sbjct: 1353 DSDYAGCKVDRKSITGTCQFLGPSLVSWFPKKQNSIVLSTTEAEYVAAGSCC 1404
>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
Length = 1063
Score = 192 bits (487), Expect(2) = 3e-95
Identities = 96/175 (54%), Positives = 118/175 (67%)
Frame = -2
Query: 856 VEQPPGFVDQDLVDFVYLLFKALYGLKQAPRTWYDTLSEFLIENGFTRGVIDKTLFYKMH 677
VEQPPGF D + + VY L KALYGLKQAPR WY+ L +FLI NGF G D TLF K
Sbjct: 677 VEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLFTKTL 736
Query: 676 KTDLILVQVYVDDIIFGSTNDSLCKRFAKLMQSKYEMSMMGELTFFLGLQVSQKQDGIFI 497
+ DL + Q+YVDDIIFGSTN S C+ F+++M K+EMSMMGEL +FLG QV Q Q+G FI
Sbjct: 737 ENDLFVCQIYVDDIIFGSTNKSTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLQEGTFI 796
Query: 496 CQSKYIRDLLKKYHFEDSAPVRTLMPXXXXXXXXXXXXKVDITSYRGMIGSLLIL 332
CQ+KY +D+L K+ +D+ P++T M VD YR MIGSLL L
Sbjct: 797 CQTKYTQDILTKFGMKDAKPIKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLLYL 851
Score = 184 bits (468), Expect(2) = 3e-95
Identities = 84/112 (75%), Positives = 98/112 (87%)
Frame = -1
Query: 338 YLTASRPDIMFATCLCARFQADPKESHLIAVKRIFRYLKGTPTLGIWYPKGTGFDLVGYT 159
YL ASRPDIM + C+CARFQ+DPKESHL AVKRI RYL TP G+WYP+G+ FDL+GY+
Sbjct: 850 YLCASRPDIMLSVCMCARFQSDPKESHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYS 909
Query: 158 DSDFAGCKIDRKSTSGSCQFLGRRLVSWHSKKQHSVSTSTAEAEYIAAGSCC 3
D+D+AGCKI+RKSTSG+CQFLGR LVSW SKKQ+SV+ STAEAEYIAAG CC
Sbjct: 910 DADWAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCC 961
>gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]
Length = 2319
Score = 192 bits (488), Expect(2) = 9e-95
Identities = 95/175 (54%), Positives = 119/175 (68%)
Frame = -2
Query: 856 VEQPPGFVDQDLVDFVYLLFKALYGLKQAPRTWYDTLSEFLIENGFTRGVIDKTLFYKMH 677
VEQPPGF D + VYLL KALYGLKQAPR WYD L +FLI+NGFT G D TLF +
Sbjct: 1437 VEQPPGFEDPKKPNHVYLLHKALYGLKQAPRAWYDCLKDFLIKNGFTIGKADSTLFTRKV 1496
Query: 676 KTDLILVQVYVDDIIFGSTNDSLCKRFAKLMQSKYEMSMMGELTFFLGLQVSQKQDGIFI 497
+L + Q+YVDDIIFGSTN+ C+ F+K+M +++EMSMMGEL +FLG QV Q ++G F+
Sbjct: 1497 DNELFVCQIYVDDIIFGSTNEKFCEEFSKVMTNRFEMSMMGELKYFLGFQVKQLKEGTFL 1556
Query: 496 CQSKYIRDLLKKYHFEDSAPVRTLMPXXXXXXXXXXXXKVDITSYRGMIGSLLIL 332
CQ+KY +D+LKK+ E + +T MP VD YR MIGSLL L
Sbjct: 1557 CQTKYTQDMLKKFGMEKAKHAKTPMPSNGHLDLNEEGKPVDQKLYRSMIGSLLYL 1611
Score = 182 bits (463), Expect(2) = 9e-95
Identities = 82/112 (73%), Positives = 98/112 (87%)
Frame = -1
Query: 338 YLTASRPDIMFATCLCARFQADPKESHLIAVKRIFRYLKGTPTLGIWYPKGTGFDLVGYT 159
YL ASRPDIM + C+CARFQA+PK+ HL+AVKRI RYL T LG+WYPKG+ FDL+GY+
Sbjct: 1610 YLCASRPDIMLSVCMCARFQANPKDCHLVAVKRILRYLVHTQNLGLWYPKGSFFDLLGYS 1669
Query: 158 DSDFAGCKIDRKSTSGSCQFLGRRLVSWHSKKQHSVSTSTAEAEYIAAGSCC 3
DSD+AGCK+DRKST+G+CQFLGR LVSW SKKQ+ V+ STAEAEYIAAG+CC
Sbjct: 1670 DSDYAGCKVDRKSTTGTCQFLGRSLVSWSSKKQNCVALSTAEAEYIAAGACC 1721