BLASTX nr result

ID: Cnidium21_contig00019559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019559
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA70969.1| amino acid transporter [Solanum tuberosum]             67   2e-09
ref|NP_001234606.1| amino acid transporter [Solanum lycopersicum...    64   1e-08
ref|XP_003634405.1| PREDICTED: amino acid permease 2 [Vitis vini...    62   4e-08
emb|CAN61092.1| hypothetical protein VITISV_005276 [Vitis vinife...    62   4e-08
ref|XP_003635029.1| PREDICTED: LOW QUALITY PROTEIN: amino acid p...    62   5e-08

>emb|CAA70969.1| amino acid transporter [Solanum tuberosum]
          Length = 376

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 5/66 (7%)
 Frame = +1

Query: 1   GGYKVKICGVIQYLNLFGVAIGYTIAASISMV*V-----LHHK*NKTRFNIAYS*IIFFF 165
           GG++VKICGVIQY NLFGVAIGYTIAASISMV V      H + ++   N++ +  +  F
Sbjct: 71  GGFQVKICGVIQYANLFGVAIGYTIAASISMVAVNRSNCFHKQGHRAACNVSSTPYMIIF 130

Query: 166 GVLKYL 183
           GV++ +
Sbjct: 131 GVMEII 136


>ref|NP_001234606.1| amino acid transporter [Solanum lycopersicum]
           gi|27447657|gb|AAO13689.1|AF013280_1 amino acid
           transporter [Solanum lycopersicum]
          Length = 471

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 5/66 (7%)
 Frame = +1

Query: 1   GGYKVKICGVIQYLNLFGVAIGYTIAASISMV*V-----LHHK*NKTRFNIAYS*IIFFF 165
           GG++VKICGVIQY NLFGVAIGYTIA+SISMV V      H + +    N++ +  +  F
Sbjct: 106 GGFQVKICGVIQYANLFGVAIGYTIASSISMVAVNRSNCFHKQGHHAACNVSSTPYMIMF 165

Query: 166 GVLKYL 183
           GV++ +
Sbjct: 166 GVMEII 171


>ref|XP_003634405.1| PREDICTED: amino acid permease 2 [Vitis vinifera]
          Length = 483

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
 Frame = +1

Query: 1   GGYKVKICGVIQYLNLFGVAIGYTIAASISMV*V-----LHHK*NKTRFNIAYS*IIFFF 165
           GG K+KICG+IQYLNLFGVAIGYTIAASISM+ +      H   +K   +I+ +  +  F
Sbjct: 117 GGAKMKICGLIQYLNLFGVAIGYTIAASISMMAIKRSNCFHESHDKNPCHISSNPYMIMF 176

Query: 166 GVLKYL 183
           G+ + +
Sbjct: 177 GIFEII 182


>emb|CAN61092.1| hypothetical protein VITISV_005276 [Vitis vinifera]
           gi|302141776|emb|CBI18979.3| unnamed protein product
           [Vitis vinifera]
          Length = 481

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
 Frame = +1

Query: 1   GGYKVKICGVIQYLNLFGVAIGYTIAASISMV*V-----LHHK*NKTRFNIAYS*IIFFF 165
           GG K+KICG+IQYLNLFGVAIGYTIAASISM+ +      H   +K   +I+ +  +  F
Sbjct: 115 GGAKMKICGLIQYLNLFGVAIGYTIAASISMMAIKRSNCFHESHDKNPCHISSNPYMIMF 174

Query: 166 GVLKYL 183
           G+ + +
Sbjct: 175 GIFEII 180


>ref|XP_003635029.1| PREDICTED: LOW QUALITY PROTEIN: amino acid permease 2-like [Vitis
           vinifera]
          Length = 483

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
 Frame = +1

Query: 1   GGYKVKICGVIQYLNLFGVAIGYTIAASISMV*V-----LHHK*NKTRFNIAYS*IIFFF 165
           GG KVK+CG+IQYLN+FGVAIGYTIAASISM+ V      H    K   +I+ +  +  F
Sbjct: 120 GGVKVKVCGLIQYLNIFGVAIGYTIAASISMMAVKRSNCFHESGGKNPCHISSNPYMIMF 179

Query: 166 GV 171
           G+
Sbjct: 180 GI 181


Top