BLASTX nr result

ID: Cnidium21_contig00019550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019550
         (930 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276849.2| PREDICTED: uncharacterized protein LOC100243...   178   2e-42
ref|NP_176947.1| sulfur E2 [Arabidopsis thaliana] gi|11072031|gb...   165   2e-38
emb|CBI16800.3| unnamed protein product [Vitis vinifera]              163   6e-38
ref|XP_002282353.1| PREDICTED: sufE-like protein, chloroplastic ...   163   6e-38
ref|XP_002887146.1| Fe-S metabolism associated domain-containing...   162   1e-37

>ref|XP_002276849.2| PREDICTED: uncharacterized protein LOC100243361 [Vitis vinifera]
          Length = 742

 Score =  178 bits (451), Expect = 2e-42
 Identities = 99/177 (55%), Positives = 122/177 (68%), Gaps = 1/177 (0%)
 Frame = -3

Query: 634 NPRNQNSRKHTHFSLKCKQSIYSPRIVNPSVNSSDNVARKVQCLIAEFKSLKEPIDRVKT 455
           +P   NSR    FS  C    +SP        +S+  + K+  LI+EF++L+EP+DRVK 
Sbjct: 67  SPLKPNSRS-PGFSFSCSAVSFSPS------RTSELASCKLGRLISEFRTLEEPVDRVKR 119

Query: 454 LLHYATLLPFLDESIRCEENRVPGCTAQVWLEVKMDFEGFMRFRVDSDSEITKGFASCLI 275
           LLHYA++LP L+ES R   NRV GCTAQVWLEVKMD EG MRF  DSDSEITKGF SCLI
Sbjct: 120 LLHYASVLPPLEESARVAGNRVMGCTAQVWLEVKMDGEGRMRFAADSDSEITKGFCSCLI 179

Query: 274 WLLDRAAPXXXXXVKAEDLAEMNIGILPA-NSRVNTWNTVLISMQKRTVALVEQRFG 107
           W+LD AAP     +K +DLA +N+G+  A +SRVNTW+ VLI M KRT ALV +R G
Sbjct: 180 WVLDGAAPEEVLALKTDDLAALNVGLPGAGHSRVNTWHNVLIVMHKRTKALVAERAG 236


>ref|NP_176947.1| sulfur E2 [Arabidopsis thaliana]
           gi|11072031|gb|AAG28910.1|AC008113_26 F12A21.6
           [Arabidopsis thaliana] gi|117958779|gb|ABK59690.1|
           At1g67810 [Arabidopsis thaliana]
           gi|332196580|gb|AEE34701.1| sulfur E2 [Arabidopsis
           thaliana]
          Length = 258

 Score =  165 bits (417), Expect = 2e-38
 Identities = 84/133 (63%), Positives = 102/133 (76%), Gaps = 1/133 (0%)
 Frame = -3

Query: 517 KVQCLIAEFKSLKEPIDRVKTLLHYATLLPFLDESIRCEENRVPGCTAQVWLEVKMDFEG 338
           K++ L++EF+SL EPIDRVK LL+YA  L  LDES R  ENRV GCT QVWLE+KMD  G
Sbjct: 77  KLRILVSEFRSLTEPIDRVKRLLNYAATLAPLDESARISENRVTGCTTQVWLEIKMDEFG 136

Query: 337 FMRFRVDSDSEITKGFASCLIWLLDRAAPXXXXXVKAEDLAEMNIGIL-PANSRVNTWNT 161
            MRF+ DSDSEI+KGF SCLIW+LD A P     V++EDL+EMN+G+     SRVNTW+ 
Sbjct: 137 RMRFKADSDSEISKGFCSCLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTWHN 196

Query: 160 VLISMQKRTVALV 122
           VL+SMQKRT+ LV
Sbjct: 197 VLMSMQKRTMTLV 209


>emb|CBI16800.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  163 bits (412), Expect = 6e-38
 Identities = 95/173 (54%), Positives = 114/173 (65%), Gaps = 3/173 (1%)
 Frame = -3

Query: 622 QNSRKHTHFSLKCKQSIYSPRIVNPSVNSSDNVARKVQCLIAEFKSLKEPIDRVKTLLHY 443
           QN R     SLKC        I +PS+      A +++ L +EF  L EPIDRVK LLHY
Sbjct: 38  QNKRNLLFKSLKCVL------ISHPSL-----AAVRLRSLASEFTGLTEPIDRVKRLLHY 86

Query: 442 ATLLPFLDESIRCEENRVPGCTAQVWLEVKMDFEGFMRFRVDSDSEITKGFASCLIWLLD 263
           A LLP  DES R   NRV GCTA+VWL+V++D  G  RF VDSDSEITKGF SCLI +LD
Sbjct: 87  AELLPPFDESARVPANRVTGCTAEVWLDVRLDEFGGTRFAVDSDSEITKGFCSCLIRVLD 146

Query: 262 RAAPXXXXXVKAEDLAEMNIGI---LPANSRVNTWNTVLISMQKRTVALVEQR 113
            AAP     +KAEDL EMN+G+   + A+SRVN W+ +L SMQKRT ALV +R
Sbjct: 147 GAAPEEVLKMKAEDLMEMNVGVGLGVRAHSRVNAWHNILTSMQKRTEALVAER 199


>ref|XP_002282353.1| PREDICTED: sufE-like protein, chloroplastic [Vitis vinifera]
          Length = 212

 Score =  163 bits (412), Expect = 6e-38
 Identities = 95/173 (54%), Positives = 114/173 (65%), Gaps = 3/173 (1%)
 Frame = -3

Query: 622 QNSRKHTHFSLKCKQSIYSPRIVNPSVNSSDNVARKVQCLIAEFKSLKEPIDRVKTLLHY 443
           QN R     SLKC        I +PS+      A +++ L +EF  L EPIDRVK LLHY
Sbjct: 38  QNKRNLLFKSLKCVL------ISHPSL-----AAVRLRSLASEFTGLTEPIDRVKRLLHY 86

Query: 442 ATLLPFLDESIRCEENRVPGCTAQVWLEVKMDFEGFMRFRVDSDSEITKGFASCLIWLLD 263
           A LLP  DES R   NRV GCTA+VWL+V++D  G  RF VDSDSEITKGF SCLI +LD
Sbjct: 87  AELLPPFDESARVPANRVTGCTAEVWLDVRLDEFGGTRFAVDSDSEITKGFCSCLIRVLD 146

Query: 262 RAAPXXXXXVKAEDLAEMNIGI---LPANSRVNTWNTVLISMQKRTVALVEQR 113
            AAP     +KAEDL EMN+G+   + A+SRVN W+ +L SMQKRT ALV +R
Sbjct: 147 GAAPEEVLKMKAEDLMEMNVGVGLGVRAHSRVNAWHNILTSMQKRTEALVAER 199


>ref|XP_002887146.1| Fe-S metabolism associated domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297332987|gb|EFH63405.1| Fe-S
           metabolism associated domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 258

 Score =  162 bits (410), Expect = 1e-37
 Identities = 82/133 (61%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
 Frame = -3

Query: 517 KVQCLIAEFKSLKEPIDRVKTLLHYATLLPFLDESIRCEENRVPGCTAQVWLEVKMDFEG 338
           K++ L++EF+SL EPIDRVK LLHYA  L  LD+S R   NRV GCT QVWLE+KMD  G
Sbjct: 76  KLRILVSEFRSLTEPIDRVKRLLHYAATLAPLDDSARVSANRVTGCTTQVWLEIKMDEFG 135

Query: 337 FMRFRVDSDSEITKGFASCLIWLLDRAAPXXXXXVKAEDLAEMNIGIL-PANSRVNTWNT 161
            MRF+ DSDSEI+KGF SCLIW+LD A P     V++EDL+EMN+G+     SRVNTW+ 
Sbjct: 136 RMRFKADSDSEISKGFCSCLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTWHN 195

Query: 160 VLISMQKRTVALV 122
           VL+ MQKRT+ LV
Sbjct: 196 VLMCMQKRTMTLV 208


Top