BLASTX nr result

ID: Cnidium21_contig00019506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019506
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272566.2| PREDICTED: uncharacterized protein LOC100244...   225   2e-56
emb|CAN74748.1| hypothetical protein VITISV_012026 [Vitis vinifera]   225   2e-56
ref|XP_002300638.1| bromodomain protein [Populus trichocarpa] gi...   215   2e-53
ref|XP_002307796.1| bromodomain protein [Populus trichocarpa] gi...   215   2e-53
emb|CBI40724.3| unnamed protein product [Vitis vinifera]              214   3e-53

>ref|XP_002272566.2| PREDICTED: uncharacterized protein LOC100244510 [Vitis vinifera]
          Length = 691

 Score =  225 bits (573), Expect = 2e-56
 Identities = 159/400 (39%), Positives = 216/400 (54%), Gaps = 23/400 (5%)
 Frame = -3

Query: 1237 TLATAEENTNGSSAYNLRKAPMSYKFQTTNAALSV-HRSRNGGNYSEWLADWNDEFPAYI 1061
            TLAT  +N+  S++YNLRK P   KF+  + ++   + SRN  NYS WL++WN+EFPA I
Sbjct: 314  TLATGGDNSISSNSYNLRKGPTPCKFRPADISVKAQYGSRNSDNYSSWLSEWNNEFPASI 373

Query: 1060 LRA-DMKYGKKLVLIDETRRETYKQFHPTSSGHEPSLLSDFGRDTKQLMPVGLHMEHSYA 884
            L+    K+GKK   +DE RR+TYK  HP +S HEPS+L+    + KQLM VGLH +H YA
Sbjct: 374  LKGVSTKHGKKPFELDENRRDTYK--HPLASNHEPSVLTTLHGELKQLMSVGLHSDHGYA 431

Query: 883  RSVARFAANLGPVVWNIASKKLTSVLPPGVKFGPGYVGEREAPLQSPFSSFERPISSCNL 704
            RS+ARFAA+LG  VW IA+KK+ +VLP GV+FGPG+VGE EA  Q P    E   SS   
Sbjct: 432  RSLARFAADLGQDVWKIAAKKIANVLPVGVEFGPGWVGENEALAQRPSLLCENQKSS--- 488

Query: 703  ACEVNNKSP----VTPSTSGMNPVVA--SGFQDRDNLEETNRRISCQNELAVSQGTPLSG 542
                NN +P      P+TSG +  VA  S    ++   E  R ++ Q EL      P   
Sbjct: 489  ----NNSTPPHPQPPPTTSGSSLFVANRSSLPCKEESGEAVRGLNSQIELTSRPAPPEIH 544

Query: 541  IRSGQNFHTPNKTVLHAGRNGLNGVFGCSFPSQMGSVLPDMAGGHTDLEE--ASQLPCLV 368
               G          +H G NG +G FG +  SQMG     M  G++  E   + +L  + 
Sbjct: 545  QTLG----------IHPGLNGFSGGFGFNPSSQMGMARLAMLAGNSSTESMPSQKLGMVS 594

Query: 367  SKSGLTSPSTLADHVNSEEHKC-VENETTLHSGLYSEGKKSLQAVSSHPLQYSVAAQ--- 200
            + S +      A++  S+  +  V + T     L + G  SL  V + P +  +  +   
Sbjct: 595  NSSSIPIHPMQANYFASDRPESPVSSNTPRSRNLAAPG--SLMKVHTPP-EVLIGGKASW 651

Query: 199  --------PDLNVRLQAPSSPNSGFR-VVSPQQPDLALQL 107
                    PDLNVR QAP SP+S    + S QQPDLALQL
Sbjct: 652  QGLPQRIPPDLNVRFQAPGSPSSSTTPIASSQQPDLALQL 691


>emb|CAN74748.1| hypothetical protein VITISV_012026 [Vitis vinifera]
          Length = 688

 Score =  225 bits (573), Expect = 2e-56
 Identities = 158/404 (39%), Positives = 212/404 (52%), Gaps = 27/404 (6%)
 Frame = -3

Query: 1237 TLATAEENTNGSSAYNLRKAPMSYKFQTTNAALSV-HRSRNGGNYSEWLADWNDEFPAYI 1061
            TLAT  +N+  S++YNLRK P   KF+  + ++   + SRN  NYS WL++WN+EFPA I
Sbjct: 311  TLATGGDNSISSNSYNLRKGPTPCKFRPADISVKAQYGSRNSDNYSSWLSEWNNEFPASI 370

Query: 1060 LRA-DMKYGKKLVLIDETRRETYKQFHPTSSGHEPSLLSDFGRDTKQLMPVGLHMEHSYA 884
            L+    K+GKK   +DE RR+TYK  HP +S HEPS+L+    + KQLM VGLH +H YA
Sbjct: 371  LKGVSTKHGKKPFELDENRRDTYK--HPLASNHEPSVLTTLHGELKQLMSVGLHSDHGYA 428

Query: 883  RSVARFAANLGPVVWNIASKKLTSVLPPGVKFGPGYVGEREAPLQSPFSSFERPISSCNL 704
            RS+ARFAA+LG  VW IA+KK+ +VLP GV+FGPG+VGE EA  Q P    E   SS   
Sbjct: 429  RSLARFAADLGQDVWKIAAKKIANVLPVGVEFGPGWVGENEALAQRPSLLCENQKSS--- 485

Query: 703  ACEVNNKSP----VTPSTSGMNPVVA--SGFQDRDNLEETNRRISCQNELAVSQGTPLSG 542
                NN +P      P+TSG +  VA  S    ++   E  R ++ Q EL      P   
Sbjct: 486  ----NNSTPPHPQPPPTTSGSSLFVANRSSLPCKEESGEAVRGLNSQIELTSRPAPPEIH 541

Query: 541  IRSGQNFHTPNKTVLHAGRNGLNGVFGCSFPSQMGSVLPDMAGGHTDLEE--ASQLPCLV 368
               G          +H G NG +G FG +  SQMG     M  G++  E   + +L  + 
Sbjct: 542  QTLG----------IHPGLNGFSGGFGFNPSSQMGMARLAMLAGNSSTESXPSQKLGMVS 591

Query: 367  SKSGLTSPSTLADHVNSEEHKCVENETTLHSGLYSE----------------GKKSLQAV 236
            + S +      A++  S+  +   +  T  S   +E                GK S Q +
Sbjct: 592  NSSSIPIHPMQANYFASDRPESPVSSNTPRSRNLAEPGSLMKVHTPPEVLIGGKASWQGL 651

Query: 235  SSHPLQYSVAAQPDLNVRLQAPSSPNSGFR-VVSPQQPDLALQL 107
                        PDLNVR QAP SP+S    + S QQPDLALQL
Sbjct: 652  PQR-------IPPDLNVRFQAPGSPSSSTTPIASSQQPDLALQL 688


>ref|XP_002300638.1| bromodomain protein [Populus trichocarpa] gi|222842364|gb|EEE79911.1|
            bromodomain protein [Populus trichocarpa]
          Length = 632

 Score =  215 bits (548), Expect = 2e-53
 Identities = 148/377 (39%), Positives = 200/377 (53%)
 Frame = -3

Query: 1237 TLATAEENTNGSSAYNLRKAPMSYKFQTTNAALSVHRSRNGGNYSEWLADWNDEFPAYIL 1058
            TLAT  ++ N S+ YNLRK+  SYK+Q  +A   V  S +  NYS WL++W +EFPA ++
Sbjct: 316  TLATGGDHNNLSNGYNLRKSS-SYKYQPGDAF--VRASYSSENYSTWLSEWENEFPASVV 372

Query: 1057 RADMKYGKKLVLIDETRRETYKQFHPTSSGHEPSLLSDFGRDTKQLMPVGLHMEHSYARS 878
            +A MKYGKK  ++DE +R+TYK  HP  S HEPS+LS F  + KQL+ VGL  EH YARS
Sbjct: 373  KAVMKYGKKPFVLDENKRDTYK--HPLGS-HEPSILSTFEGELKQLVVVGLSSEHGYARS 429

Query: 877  VARFAANLGPVVWNIASKKLTSVLPPGVKFGPGYVGEREAPLQSPFSSFERPISSCNLAC 698
            +ARFAA+LGPVVW IASKK+ SVLP G++FGPG+VGE +A         E+     NL  
Sbjct: 430  LARFAADLGPVVWRIASKKIESVLPTGLEFGPGWVGENKA--------MEKQKILNNLVS 481

Query: 697  EVNNKSPVTPSTSGMNPVVASGFQDRDNLEETNRRISCQNELAVSQGTPLSGIRSGQNFH 518
            + N+ S   P+ S           +R+ L ET   ++ QNELA +  +   G++S  +  
Sbjct: 482  D-NHLSRFQPAASSSREAA----WNREGLPETVGGLNPQNELA-TLNSGAGGMKSMPSLQ 535

Query: 517  TPNKTVLHAGRNGLNGVFGCSFPSQMGSVLPDMAGGHTDLEEASQLPCLVSKSGLTSPST 338
               K ++H   NG +G FG +   Q G        G  +LE                   
Sbjct: 536  IQQKPIIHPDMNGFSGGFGYNSSPQPGMARTVAPTGKLNLE------------------- 576

Query: 337  LADHVNSEEHKCVENETTLHSGLYSEGKKSLQAVSSHPLQYSVAAQPDLNVRLQAPSSPN 158
                           +T + S ++  G    Q       Q +V   PDLNV   AP SP 
Sbjct: 577  ---------------QTAVPSQMFGVGFLPYQQ------QGTVPFPPDLNVGFLAPGSPT 615

Query: 157  SGFRVVSPQQPDLALQL 107
            S   + SP+QPDLALQL
Sbjct: 616  SSVPIGSPRQPDLALQL 632


>ref|XP_002307796.1| bromodomain protein [Populus trichocarpa] gi|222857245|gb|EEE94792.1|
            bromodomain protein [Populus trichocarpa]
          Length = 617

 Score =  215 bits (547), Expect = 2e-53
 Identities = 144/378 (38%), Positives = 207/378 (54%), Gaps = 1/378 (0%)
 Frame = -3

Query: 1237 TLATAEENTNGSSAYNLRKAPMSYKFQTTNAALSV-HRSRNGGNYSEWLADWNDEFPAYI 1061
            TLAT  +N + S+ YNLR++  SYK+Q  ++ +   H S N  N+S WL++W +EFPA +
Sbjct: 299  TLATGGDNNSLSNGYNLRRSS-SYKYQPADSLVRASHGSHNNENHSTWLSEWENEFPASV 357

Query: 1060 LRADMKYGKKLVLIDETRRETYKQFHPTSSGHEPSLLSDFGRDTKQLMPVGLHMEHSYAR 881
            ++A +KYGKK +++DE +R+TYK  HP  S HEPS+L  F  + KQLM VGL  EH YAR
Sbjct: 358  VKAVIKYGKKPIVLDENKRDTYK--HPLDS-HEPSVLMTFDGELKQLMAVGLSSEHGYAR 414

Query: 880  SVARFAANLGPVVWNIASKKLTSVLPPGVKFGPGYVGEREAPLQSPFSSFERPISSCNLA 701
            S+ARFAA+LGPVVW +ASKK+ SVLP G++FGPG+VGE +A  +   S+   PIS     
Sbjct: 415  SLARFAADLGPVVWRMASKKIESVLPTGIEFGPGWVGENKAMEKHKVSN--SPISD---- 468

Query: 700  CEVNNKSPVTPSTSGMNPVVASGFQDRDNLEETNRRISCQNELAVSQGTPLSGIRSGQNF 521
               N+ S   P+TS       S    ++++ ET   ++ +NEL  +  +   G++S    
Sbjct: 469  ---NHLSRFQPATSLSRDATWS----KEDMLETVGGLNSKNEL-TTLNSATGGMKSLPTV 520

Query: 520  HTPNKTVLHAGRNGLNGVFGCSFPSQMGSVLPDMAGGHTDLEEASQLPCLVSKSGLTSPS 341
                K ++H   NG +G FG +  SQ+G+V P    G   LE+                 
Sbjct: 521  SMQQKPMIHPDMNGFSGGFGYNSSSQIGTVAPT---GKFSLEKL---------------- 561

Query: 340  TLADHVNSEEHKCVENETTLHSGLYSEGKKSLQAVSSHPLQYSVAAQPDLNVRLQAPSSP 161
                      H  V ++      ++  G         +  Q +V   PDLNV   AP SP
Sbjct: 562  ----------HPAVPSQ------MFGAG------FLPYHQQGTVPFPPDLNVGFMAPGSP 599

Query: 160  NSGFRVVSPQQPDLALQL 107
            +S   + SP+QPDL LQL
Sbjct: 600  SSSVPIGSPRQPDLVLQL 617


>emb|CBI40724.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  214 bits (546), Expect = 3e-53
 Identities = 150/386 (38%), Positives = 194/386 (50%), Gaps = 9/386 (2%)
 Frame = -3

Query: 1237 TLATAEENTNGSSAYNLRKAPMSYKFQTTNAALSV-HRSRNGGNYSEWLADWNDEFPAYI 1061
            TLAT  +N+  S++YNLRK P   KF+  + ++   + SRN  NYS WL++WN+EFPA I
Sbjct: 317  TLATGGDNSISSNSYNLRKGPTPCKFRPADISVKAQYGSRNSDNYSSWLSEWNNEFPASI 376

Query: 1060 LRA-DMKYGKKLVLIDETRRETYKQFHPTSSGHEPSLLSDFGRDTKQLMPVGLHMEHSYA 884
            L+    K+GKK   +DE RR+TYK  HP +S HEPS+L+    + KQLM VGLH +H YA
Sbjct: 377  LKGVSTKHGKKPFELDENRRDTYK--HPLASNHEPSVLTTLHGELKQLMSVGLHSDHGYA 434

Query: 883  RSVARFAANLGPVVWNIASKKLTSVLPPGVKFGPGYVGEREAPLQSPFSSFERPISSCNL 704
            RS+ARFAA+LG  VW IA+KK+ +VLP GV+FGPG+VGE EA  Q P    E   SS   
Sbjct: 435  RSLARFAADLGQDVWKIAAKKIANVLPVGVEFGPGWVGENEALAQRPSLLCENQKSS--- 491

Query: 703  ACEVNNKSP----VTPSTSGMNPVVA--SGFQDRDNLEETNRRISCQNELAVSQGTPLSG 542
                NN +P      P+TSG +  VA  S    ++   E  R ++ Q EL      P   
Sbjct: 492  ----NNSTPPHPQPPPTTSGSSLFVANRSSLPCKEESGEAVRGLNSQIELTSRPAPPEIH 547

Query: 541  IRSGQNFHTPNKTVLHAGRNGLNGVFGCSFPSQMGSVLPDMAGGHTDLEEASQLPCLVSK 362
               G          +H G NG +G FG +  SQMG     M  G++  E          K
Sbjct: 548  QTLG----------IHPGLNGFSGGFGFNPSSQMGMARLAMLAGNSSTESMPS-----QK 592

Query: 361  SGLTSPSTLADHVNSEEHKCVENETTLHSGLYSEGKKSLQAVSSHPLQYSVAAQPDLNVR 182
             G+  P  +                                             PDLNVR
Sbjct: 593  LGMGLPQRI--------------------------------------------PPDLNVR 608

Query: 181  LQAPSSPNSGFR-VVSPQQPDLALQL 107
             QAP SP+S    + S QQPDLALQL
Sbjct: 609  FQAPGSPSSSTTPIASSQQPDLALQL 634


Top