BLASTX nr result

ID: Cnidium21_contig00019483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019483
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300091.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002323991.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit ...    73   3e-11
ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putati...    72   4e-11
gb|AFK44725.1| unknown [Medicago truncatula]                           72   6e-11

>ref|XP_002300091.1| predicted protein [Populus trichocarpa] gi|222847349|gb|EEE84896.1|
           predicted protein [Populus trichocarpa]
          Length = 423

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/50 (74%), Positives = 44/50 (88%)
 Frame = -3

Query: 365 IERIDSSIERMMTLSKKLTATDELMSCDPAYLSRVGKERAPRLDFDDYDP 216
           IE IDSSI+R+MTLSKKLTA DEL+SCDP YL++VG+ER  R DFDD+DP
Sbjct: 368 IEHIDSSIQRIMTLSKKLTAMDELISCDPLYLAKVGRER-QRFDFDDFDP 416


>ref|XP_002323991.1| predicted protein [Populus trichocarpa] gi|222866993|gb|EEF04124.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/50 (72%), Positives = 43/50 (86%)
 Frame = -3

Query: 365 IERIDSSIERMMTLSKKLTATDELMSCDPAYLSRVGKERAPRLDFDDYDP 216
           IE IDSSI+R+MTLSKKLTA DEL+SCDP YL++ G+ER  R DFDD+DP
Sbjct: 369 IEHIDSSIQRIMTLSKKLTAVDELLSCDPLYLAKAGRER-QRFDFDDFDP 417


>ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera]
           gi|296090247|emb|CBI40066.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/49 (71%), Positives = 41/49 (83%)
 Frame = -3

Query: 365 IERIDSSIERMMTLSKKLTATDELMSCDPAYLSRVGKERAPRLDFDDYD 219
           IE IDSSI+R+MTLSKKLT  DEL+SCDP YL++ G+ER  R DFDDYD
Sbjct: 369 IEHIDSSIQRIMTLSKKLTTMDELISCDPLYLAKAGRER-QRFDFDDYD 416


>ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis]
           gi|223549455|gb|EEF50943.1| 26S proteasome regulatory
           subunit S3, putative [Ricinus communis]
          Length = 427

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/49 (71%), Positives = 41/49 (83%)
 Frame = -3

Query: 365 IERIDSSIERMMTLSKKLTATDELMSCDPAYLSRVGKERAPRLDFDDYD 219
           IE IDSSI+R+M LSKKLTA DELMSCDP YL++ G+ER  R DFDD+D
Sbjct: 372 IEHIDSSIQRIMNLSKKLTAMDELMSCDPLYLAKAGRER-QRFDFDDFD 419


>gb|AFK44725.1| unknown [Medicago truncatula]
          Length = 92

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/49 (73%), Positives = 41/49 (83%)
 Frame = -3

Query: 365 IERIDSSIERMMTLSKKLTATDELMSCDPAYLSRVGKERAPRLDFDDYD 219
           IE IDSSI+R+M LSKKLTATDE +SCD  YLS+VG+ER  R DFDDYD
Sbjct: 38  IEHIDSSIQRIMALSKKLTATDEQISCDQLYLSKVGRER-QRYDFDDYD 85


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