BLASTX nr result
ID: Cnidium21_contig00019455
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00019455
(1216 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3... 386 e-105
ref|XP_002330492.1| predicted protein [Populus trichocarpa] gi|2... 369 e-100
ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|2... 363 5e-98
ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis tha... 357 3e-96
gb|AAD10148.1| putative recA protein [Arabidopsis thaliana] 357 3e-96
>ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Vitis vinifera] gi|297738654|emb|CBI27899.3| unnamed
protein product [Vitis vinifera]
Length = 421
Score = 386 bits (992), Expect = e-105
Identities = 202/271 (74%), Positives = 225/271 (83%), Gaps = 7/271 (2%)
Frame = +1
Query: 1 AEHALDPALAKAIGVNTENLLLSQPDCGEQALSLVDTIIRSGXXXXXXXXXXXXLVPKSE 180
AEHALDPALA+AIGVNT+NLLLSQPDCGEQALSLVDT+IRSG LVPK E
Sbjct: 148 AEHALDPALAEAIGVNTQNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGE 207
Query: 181 LDGEMGDPHMAMQARLMSQALRKLSHSLSMSQTILIFINQVRAKLSTFG-FGGPTEVTCG 357
LDGEMGD HMAMQARLMSQALRKLSHSLS+SQTILIFINQVRAKLSTFG FGGPTEVTCG
Sbjct: 208 LDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTFGGFGGPTEVTCG 267
Query: 358 GNALKFYASVRLNIRRTGFVKKGEETVGSQVTVKIVKNKHAPPFRTAEFELEFGKGICQE 537
GNALKFYASVRLNI+R G VKKGEET+GSQV VK+VKNKHAPPF+TA+FELEFGKGIC+E
Sbjct: 268 GNALKFYASVRLNIKRIGLVKKGEETIGSQVLVKVVKNKHAPPFKTAQFELEFGKGICRE 327
Query: 538 AEILELGCKHKFITKAGTAYYNLNGKSFCGKDAIKRFLAEDKDAKEELMMKLREKLTDSE 717
+EI+ELGCKHKFI K G A Y+ NG+SF GKDAIK+FL++++ +EELM KLREKL E
Sbjct: 328 SEIVELGCKHKFIIKGGGAMYSYNGQSFRGKDAIKQFLSQNESEREELMRKLREKLV-GE 386
Query: 718 RHKEIETETESVQEN------PTDNTKSETT 792
+KE E E E+V E+ P D T E T
Sbjct: 387 TNKEKELEAEAVDEDIAEGTVPPDTTDEEVT 417
>ref|XP_002330492.1| predicted protein [Populus trichocarpa] gi|222872426|gb|EEF09557.1|
predicted protein [Populus trichocarpa]
Length = 357
Score = 369 bits (948), Expect = e-100
Identities = 193/266 (72%), Positives = 219/266 (82%), Gaps = 4/266 (1%)
Frame = +1
Query: 1 AEHALDPALAKAIGVNTENLLLSQPDCGEQALSLVDTIIRSGXXXXXXXXXXXXLVPKSE 180
AEHALD +LAKAIGVNTENLLLSQPDCGEQALSLVDT+IRSG LVPKSE
Sbjct: 93 AEHALDSSLAKAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKSE 152
Query: 181 LDGEMGDPHMAMQARLMSQALRKLSHSLSMSQTILIFINQVRAKLSTFGFGGPTEVTCGG 360
LDGEMGD HMAMQARLMSQALRKLSHSLS SQT+LIFINQVRAKLSTFGFGGPTEVTCGG
Sbjct: 153 LDGEMGDAHMAMQARLMSQALRKLSHSLSQSQTVLIFINQVRAKLSTFGFGGPTEVTCGG 212
Query: 361 NALKFYASVRLNIRRTGFVKKGEETVGSQVTVKIVKNKHAPPFRTAEFELEFGKGICQEA 540
NALKFYASVRLNIRR GF+KKGEET G+QV VKI KNK APPF+T +FELEFGKGI +E+
Sbjct: 213 NALKFYASVRLNIRRVGFIKKGEETTGTQVQVKIAKNKLAPPFKTVQFELEFGKGISRES 272
Query: 541 EILELGCKHKFITKAGTAYYNLNGKSFCGKDAIKRFLAEDKDAKEELMMKLREKLTDSER 720
EI+EL KHKFI K G A+Y+ NG+ + GK+A++ FLA + D +EELMMKLREKL ++E
Sbjct: 273 EIIELAVKHKFIKKNG-AFYDCNGRKYHGKEALREFLAHNDDVQEELMMKLREKLLEAET 331
Query: 721 HKEIETET---ESVQEN-PTDNTKSE 786
+E++ ET E QE+ P D+T E
Sbjct: 332 DQELKDETTDGEPTQESIPPDSTDEE 357
>ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|222854260|gb|EEE91807.1|
predicted protein [Populus trichocarpa]
Length = 418
Score = 363 bits (932), Expect = 5e-98
Identities = 189/256 (73%), Positives = 211/256 (82%), Gaps = 3/256 (1%)
Frame = +1
Query: 1 AEHALDPALAKAIGVNTENLLLSQPDCGEQALSLVDTIIRSGXXXXXXXXXXXXLVPKSE 180
AEHALD +LAKAIGVNTENLLLSQPDCGEQALSLVDT+IRSG LVPKSE
Sbjct: 148 AEHALDSSLAKAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKSE 207
Query: 181 LDGEMGDPHMAMQARLMSQALRKLSHSLSMSQTILIFINQVRAKLSTFGFGGPTEVTCGG 360
LDGEMGD HMAMQARLMSQALRKLSHSLS SQTIL+FINQVRAKLSTFGFGGPTEVTCGG
Sbjct: 208 LDGEMGDAHMAMQARLMSQALRKLSHSLSQSQTILVFINQVRAKLSTFGFGGPTEVTCGG 267
Query: 361 NALKFYASVRLNIRRTGFVKKGEETVGSQVTVKIVKNKHAPPFRTAEFELEFGKGICQEA 540
NALKFYASVRLNIRR GF+KKGEET G+QV VKIVKNK APPF+T +FELEFGKGI +E+
Sbjct: 268 NALKFYASVRLNIRRVGFIKKGEETTGTQVQVKIVKNKLAPPFKTVQFELEFGKGISRES 327
Query: 541 EILELGCKHKFITKAGTAYYNLNGKSFCGKDAIKRFLAEDKDAKEELMMKLREKLTDSER 720
EI+EL KHK I K+G ++Y+ NGK + GK+A K FLA + D +EELMMKLREKL + E
Sbjct: 328 EIIELALKHKLIKKSG-SFYDCNGKKYHGKEAFKEFLAHNDDVQEELMMKLREKLLEGET 386
Query: 721 HKEI---ETETESVQE 759
+E+ T+ E QE
Sbjct: 387 GQELGDESTDGEPTQE 402
>ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis thaliana]
gi|209572665|sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA
repair protein recA homolog 3, mitochondrial; AltName:
Full=Recombinase A homolog 3; Flags: Precursor
gi|119935859|gb|ABM06015.1| At2g19490 [Arabidopsis
thaliana] gi|330251794|gb|AEC06888.1| DNA repair protein
recA-like 3 [Arabidopsis thaliana]
Length = 430
Score = 357 bits (916), Expect = 3e-96
Identities = 190/270 (70%), Positives = 220/270 (81%), Gaps = 7/270 (2%)
Frame = +1
Query: 1 AEHALDPALAKAIGVNTENLLLSQPDCGEQALSLVDTIIRSGXXXXXXXXXXXXLVPKSE 180
AEHALD +LAKAIGVNTENLLLSQPDCGEQALSLVDT+IRSG LVPK E
Sbjct: 148 AEHALDSSLAKAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGE 207
Query: 181 LDGEMGDPHMAMQARLMSQALRKLSHSLSMSQTILIFINQVRAKLSTF-GFGGPTEVTCG 357
L+GEMGD HMAMQARLMSQALRKLSHSLS+SQT+LIFINQVR+KLSTF GFGGPTEVTCG
Sbjct: 208 LEGEMGDAHMAMQARLMSQALRKLSHSLSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCG 267
Query: 358 GNALKFYASVRLNIRRTGFVKKGEETVGSQVTVKIVKNKHAPPFRTAEFELEFGKGICQE 537
GNALKFYAS+RLNI+R G +KKGEET GSQV+VKIVKNK APPFRTA+FELEFGKGIC+
Sbjct: 268 GNALKFYASMRLNIKRIGLIKKGEETTGSQVSVKIVKNKLAPPFRTAQFELEFGKGICKI 327
Query: 538 AEILELGCKHKFITKAGTAYYNLNGKSFCGKDAIKRFLAEDKDAKEELMMKLREKLTDSE 717
EI++L KHKFI K GT +YNLNGK++ GK+A+KRFL +++ +EELM KL++KL E
Sbjct: 328 TEIIDLSIKHKFIAKNGT-FYNLNGKNYHGKEALKRFLKQNESDQEELMKKLQDKLIADE 386
Query: 718 RHKEIETETESVQEN------PTDNTKSET 789
+ ETE+ES +E+ DNT E+
Sbjct: 387 A-ADKETESESEEEDSLRVVVSPDNTDDES 415
>gb|AAD10148.1| putative recA protein [Arabidopsis thaliana]
Length = 376
Score = 357 bits (916), Expect = 3e-96
Identities = 190/270 (70%), Positives = 220/270 (81%), Gaps = 7/270 (2%)
Frame = +1
Query: 1 AEHALDPALAKAIGVNTENLLLSQPDCGEQALSLVDTIIRSGXXXXXXXXXXXXLVPKSE 180
AEHALD +LAKAIGVNTENLLLSQPDCGEQALSLVDT+IRSG LVPK E
Sbjct: 94 AEHALDSSLAKAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGE 153
Query: 181 LDGEMGDPHMAMQARLMSQALRKLSHSLSMSQTILIFINQVRAKLSTF-GFGGPTEVTCG 357
L+GEMGD HMAMQARLMSQALRKLSHSLS+SQT+LIFINQVR+KLSTF GFGGPTEVTCG
Sbjct: 154 LEGEMGDAHMAMQARLMSQALRKLSHSLSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCG 213
Query: 358 GNALKFYASVRLNIRRTGFVKKGEETVGSQVTVKIVKNKHAPPFRTAEFELEFGKGICQE 537
GNALKFYAS+RLNI+R G +KKGEET GSQV+VKIVKNK APPFRTA+FELEFGKGIC+
Sbjct: 214 GNALKFYASMRLNIKRIGLIKKGEETTGSQVSVKIVKNKLAPPFRTAQFELEFGKGICKI 273
Query: 538 AEILELGCKHKFITKAGTAYYNLNGKSFCGKDAIKRFLAEDKDAKEELMMKLREKLTDSE 717
EI++L KHKFI K GT +YNLNGK++ GK+A+KRFL +++ +EELM KL++KL E
Sbjct: 274 TEIIDLSIKHKFIAKNGT-FYNLNGKNYHGKEALKRFLKQNESDQEELMKKLQDKLIADE 332
Query: 718 RHKEIETETESVQEN------PTDNTKSET 789
+ ETE+ES +E+ DNT E+
Sbjct: 333 A-ADKETESESEEEDSLRVVVSPDNTDDES 361