BLASTX nr result

ID: Cnidium21_contig00019445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019445
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]   139   7e-31
gb|ACX85638.1| putative transposase [Cucumis melo]                    128   9e-28
ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatu...   127   2e-27
gb|ADN33674.1| transposase [Cucumis melo subsp. melo]                 124   2e-26
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...   121   1e-25

>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score =  139 bits (349), Expect = 7e-31
 Identities = 66/138 (47%), Positives = 87/138 (63%)
 Frame = -3

Query: 528 DGTKVKGPPTHNEWENVRMFAQFLMIFHKVMLKFSGSLYVTSNTYFNALVTMHQFLNLML 349
           +  + KGPP   +W+N R+F +FL IF  V L+ SGSL+ TSN YF+ L  +   +   L
Sbjct: 260 NAVRKKGPPLVEDWDNARVFVKFLKIFFDVTLRISGSLFTTSNAYFHKLCLIRNLIRKYL 319

Query: 348 SSKDDCMSSMAMRVKMIYDKYWGQYENISYLLYIAVVLDPRYKMKYVDFCFKILYDSEKA 169
            S D  +S MA  +K  YDKYWG  +  + LLY+ VVLDPRYK+K+V FCF  LYD E A
Sbjct: 320 KSNDLLLSDMAQNMKAKYDKYWGNLKRSNLLLYVVVVLDPRYKLKFVQFCFDQLYDKEVA 379

Query: 168 TEMSSNVKVALQKLYSFY 115
            +MS+ V   L+KLY  Y
Sbjct: 380 KDMSTRVVDVLRKLYDEY 397


>gb|ACX85638.1| putative transposase [Cucumis melo]
          Length = 680

 Score =  128 bits (322), Expect = 9e-28
 Identities = 68/193 (35%), Positives = 111/193 (57%), Gaps = 2/193 (1%)
 Frame = -3

Query: 666 LKSRNFLCLDDDTSWISTYLMLEAAVKFEKAFGRLNEEGPSFKAYFDGTKVKGPPTHNEW 487
           + ++N L +D  T W ST+ ML+ A+K +K F RL E  PS+    D       PT  +W
Sbjct: 326 MSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDD------IPTTEDW 379

Query: 486 ENVRMFAQFLMIFHKVMLKFSGSLYVTSNTYFNALVTMHQFLNLMLSSKDDCMSSMAMRV 307
           +N ++F +FL  F +V +KFS S+ VTSN +F+ L  + + +    S ++  +S M + +
Sbjct: 380 DNAKVFVKFLKTFSEVTMKFSASMSVTSNIFFHELCLIQEIIREYSSYENALLSQMTLSM 439

Query: 306 KMIYDKYWG--QYENISYLLYIAVVLDPRYKMKYVDFCFKILYDSEKATEMSSNVKVALQ 133
           +  ++KYWG    E  + LLY++VVLDPRYK+ YV++CF    + + A   ++ V+ A +
Sbjct: 440 QTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFLEEDCAKIWTNKVEEAFR 499

Query: 132 KLYSFYETTTSIE 94
           +L   Y    S E
Sbjct: 500 RLCDDYYMRMSKE 512


>ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatula]
           gi|355481013|gb|AES62216.1| Elongation factor 1-alpha
           [Medicago truncatula]
          Length = 1001

 Score =  127 bits (319), Expect = 2e-27
 Identities = 71/214 (33%), Positives = 117/214 (54%)
 Frame = -3

Query: 657 RNFLCLDDDTSWISTYLMLEAAVKFEKAFGRLNEEGPSFKAYFDGTKVKGPPTHNEWENV 478
           ++ +CLD +T W +TYLM  AA+K EK F  L      +      TK KG PT ++W+ V
Sbjct: 346 KSSVCLDVETRWNTTYLMAAAALKHEKTFEELCFLDQKYVNELT-TKGKGVPTQDDWKRV 404

Query: 477 RMFAQFLMIFHKVMLKFSGSLYVTSNTYFNALVTMHQFLNLMLSSKDDCMSSMAMRVKMI 298
           R    FL +F+   ++ SGS Y+TSN Y   ++ + + +  M SS+D  + SMA R+K+ 
Sbjct: 405 REILPFLKMFYDATVRISGSSYLTSNIYMFEILGIGKRIVEMCSSEDVHLRSMAQRMKLK 464

Query: 297 YDKYWGQYENISYLLYIAVVLDPRYKMKYVDFCFKILYDSEKATEMSSNVKVALQKLYSF 118
           YDKYWG Y++++ +L +A+V DPR K++  D+  +  Y+ + +  + + ++  L+ LY  
Sbjct: 465 YDKYWGNYKSLNMMLLVALVFDPRRKVRLADWMIRRFYNEDDSDALIAMLESCLKSLYEE 524

Query: 117 YETTTSIEVPEDVRSESEEIEGDEDAFTRCLRYL 16
           Y     +  P       +   GD D +     YL
Sbjct: 525 Y--YDRVMHPRGNSEAPQAFNGDSDLYGTSEFYL 556


>gb|ADN33674.1| transposase [Cucumis melo subsp. melo]
          Length = 347

 Score =  124 bits (310), Expect = 2e-26
 Identities = 66/185 (35%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
 Frame = -3

Query: 642 LDDDTSWISTYLMLEAAVKFEKAFGRLNEEGPSFKAYFDGTKVKGPPTHNEWENVRMFAQ 463
           +D  T W ST+ ML+ A+K +K F RL E  PS+    D       PT  +W+N ++F +
Sbjct: 1   MDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDD------IPTTEDWDNAKVFVK 54

Query: 462 FLMIFHKVMLKFSGSLYVTSNTYFNALVTMHQFLNLMLSSKDDCMSSMAMRVKMIYDKYW 283
           FL  F +V +KFS S+ VTSN +F+ L  + + +    S ++  +S M + ++  ++KYW
Sbjct: 55  FLKTFSEVTMKFSASMSVTSNIFFHELCLIQEIIREYSSYENALLSQMTLSMQTKFNKYW 114

Query: 282 G--QYENISYLLYIAVVLDPRYKMKYVDFCFKILYDSEKATEMSSNVKVALQKLYSFYET 109
           G    E  + LLY++VVLDPRYK+ YV++CF    + + A   ++ V+ A ++L   Y  
Sbjct: 115 GITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFLEEDCAKIWTNKVEEAFRRLCDDYYM 174

Query: 108 TTSIE 94
             S E
Sbjct: 175 RMSKE 179


>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score =  121 bits (303), Expect = 1e-25
 Identities = 69/197 (35%), Positives = 113/197 (57%), Gaps = 2/197 (1%)
 Frame = -3

Query: 666  LKSRNFLCLDDDTSWISTYLMLEAAVKFEKAFGRLNEEGPSFKAYFDGTKVKGPPTHNEW 487
            ++ ++ +  D  T W STYLMLE+A+KF+KAF RL E+   + A  +G    G P + +W
Sbjct: 1264 IQDKSTVQYDCPTRWNSTYLMLESALKFQKAFKRLGEKCVEY-AMLEG----GVPNNVDW 1318

Query: 486  ENVRMFAQFLMIFHKVMLKFSGSLYVTSNTYFNALVTMHQFLNLMLSS-KDD-CMSSMAM 313
            +N + F +FL +F ++  K SGS YVTS+TYF     +    N  +   KDD  +++MA 
Sbjct: 1319 DNAKCFVKFLKLFFEITKKVSGSTYVTSSTYFMEHCKILGGFNAWMGCHKDDPILANMAT 1378

Query: 312  RVKMIYDKYWGQYENISYLLYIAVVLDPRYKMKYVDFCFKILYDSEKATEMSSNVKVALQ 133
            ++   Y KYWG    ++ L++IAV+  PR K +++++     Y+ E A  +   VK AL 
Sbjct: 1379 KMTAKYSKYWGDVAKMNMLVFIAVIFYPRRKFQFINWGLNKYYEKEVADSLCDKVKEALN 1438

Query: 132  KLYSFYETTTSIEVPED 82
            K++  Y   ++ E  +D
Sbjct: 1439 KMFESYSRFSNKEDVDD 1455


Top