BLASTX nr result

ID: Cnidium21_contig00019411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019411
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   115   1e-23
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               84   4e-14
ref|XP_003616769.1| F-box/LRR-repeat protein [Medicago truncatul...    83   9e-14
ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    83   1e-13
ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|2...    79   2e-12

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  115 bits (289), Expect = 1e-23
 Identities = 92/269 (34%), Positives = 139/269 (51%), Gaps = 15/269 (5%)
 Frame = -1

Query: 967 LEDLVIESCKWISGCCLSICGSMLKNLTL----DSPISLVHVEKVEPKIFIDTPALQTLK 800
           LE+LVIE  +  +   +++    LK L +    D        E  + K+ +D P L+ L 
Sbjct: 191 LEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLEYLS 250

Query: 799 IGEFISEDISIKEQLLFLTTASIDVALRLERSMQSRAYGDI-----VFGLLNKIYHVKYL 635
           I +++S+D  +K+ L  L  A IDV    E   +S   G I     ++ LL +I +VK L
Sbjct: 251 ITDYLSKDYFVKD-LPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRISNVKCL 309

Query: 634 TLSENTLGVLNHA-SDYCFPTFHNLTVLELLFDTSSCWTLLPYILARSPKLQSLVFPNGL 458
           +L+  TL  L+    DY  PTFHN+T LE LF     W  LP  L  SP L++LV   G 
Sbjct: 310 SLTGVTLDSLSGTIGDYKLPTFHNMTRLEFLFIGGFNWDFLPNFLHSSPNLEALVIETG- 368

Query: 457 VGMSSYGSSFL---WSPSELVPERLFSHLKTIEIREFLGKDEELLLIKYFLEYGRSLRRI 287
                Y +  +   W     VP  L  HLK IEIR  +G+D EL  ++Y L+    L+++
Sbjct: 369 -----YTNELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQM 423

Query: 286 SIDC--SHVPKYAKIQKELLKLRKGSKTC 206
           +IDC  S++ +   + K+LL L +GS++C
Sbjct: 424 TIDCHESYMDQEFCVCKKLLGLPRGSRSC 452


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 72/232 (31%), Positives = 109/232 (46%), Gaps = 1/232 (0%)
 Frame = -1

Query: 967 LEDLVIESCKWISGCCLSICGSMLKNLTLDSPISLVHVEKVEPKIFIDTPALQTLKIGEF 788
           LE+LVIE  +       ++    LK+L        ++  K   K+ +D P L+ L I +F
Sbjct: 153 LEELVIERWRLDEQWVFNVSAPTLKSLA-------IYFSKY--KLVVDAPNLEYLSITDF 203

Query: 787 ISEDISIKEQLLFLTTASIDVALRLERSMQSRAYGDIVFGLLNKIYHVKYLTLSENTLGV 608
           +SED  +   L  L  A ++V   +        Y   ++ LL  I +VK+L+LS  TL  
Sbjct: 204 VSEDY-LMSNLSSLVKAYVNVGPTIRGIDDQILYRGRIYELLRGISNVKHLSLSGETLHS 262

Query: 607 LNHA-SDYCFPTFHNLTVLELLFDTSSCWTLLPYILARSPKLQSLVFPNGLVGMSSYGSS 431
           L+     Y  P FH++T LEL  D       L   L  SP L+ L+  N           
Sbjct: 263 LSGMFCGYELPAFHSVTRLELEVDYGYGLEFLKEFLDTSPNLEILILENVNKDECEIEE- 321

Query: 430 FLWSPSELVPERLFSHLKTIEIREFLGKDEELLLIKYFLEYGRSLRRISIDC 275
             W+    VP  +  HL  +EI++F G D EL  I++ L+  R L+++SIDC
Sbjct: 322 --WTLPLQVPTCVELHLNEVEIKKFDGLDYELGAIEFLLKNARVLKKMSIDC 371


>ref|XP_003616769.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355518104|gb|AES99727.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 436

 Score = 83.2 bits (204), Expect = 9e-14
 Identities = 78/255 (30%), Positives = 115/255 (45%), Gaps = 3/255 (1%)
 Frame = -1

Query: 967 LEDLVIESCKWISGCCLSICGSMLKNLTLDSPISLVHVEKVEPKIFIDTPALQTLKIGEF 788
           LE+L  E  ++       IC   LK L         HV   + KI I+TP L+ L + E 
Sbjct: 184 LEELYYEDVEFKCSSLFGICVPTLKRL---------HVRSFDEKIHINTPLLEYLVLEET 234

Query: 787 ISEDISIKEQLLFLTTASIDVALRLERSMQSRAYGDIVFGLLNKIYHVKYLTLSENTLGV 608
            + +  + E L  L  A I +    E    ++     +  LLN I+  ++L L  ++  V
Sbjct: 235 KASNYEV-ENLNKLKEARIGIYFDHE----NKEVKQNISNLLNGIHKTRFLCLDMDSTEV 289

Query: 607 LNHASDYCFPTFHNLTVLELLFDTSSCWTLLPYILARSPKLQSLVFPNGLVGMSSYGSSF 428
           L +A    FPTF+NL  L+L   T +   L+  +L + P L  L     +       +  
Sbjct: 290 LTYAC-LEFPTFNNLGYLQLYLKTFNSHFLVKLLLEKCPNLDVLEI---IKVDDLCDNEI 345

Query: 427 LWSPSELVPERLFSHLKTIEIREFLGKDEELLLIKYFLEYGRSLRRISI--DCSHVPKYA 254
            W+   +VP  L SHL T   R++ G DEE  LI+Y L+ G+ L R +I    S  P  A
Sbjct: 346 KWAEPTIVPSCLSSHLTTFIFRDYEGTDEEFELIRYILKSGKVLERTTIYFGSSWEPSEA 405

Query: 253 K-IQKELLKLRKGSK 212
           +    EL  L K SK
Sbjct: 406 RDAVSELCSLPKASK 420


>ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75249810|sp|Q94B46.1|FBL74_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g14096
           gi|14596145|gb|AAK68800.1| Unknown protein [Arabidopsis
           thaliana] gi|22136112|gb|AAM91134.1| unknown protein
           [Arabidopsis thaliana] gi|332657971|gb|AEE83371.1|
           F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 468

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 85/278 (30%), Positives = 128/278 (46%), Gaps = 16/278 (5%)
 Frame = -1

Query: 967 LEDLVIESCKWISGCCLSICGSMLKNLTLDSPISLVHVEKVEPKIFIDTPALQTLKIGEF 788
           LEDLV++   W +    S+    LK LT  + +     ++    + IDTP L  LK  + 
Sbjct: 187 LEDLVLDDIPWCTWDFASVSVPTLKRLTFSTQVR----DEFPKSVSIDTPNLVYLKFTDT 242

Query: 787 ISEDISIKEQLLFLTTASIDVALRLERSMQSRAYGDIVFG---LLNKIYHVKYLTLSENT 617
           ++     K     L  A ID  LRL +  Q     D+V      + +I +VK L LS NT
Sbjct: 243 VAGKYP-KVNFDSLVEAHID--LRLLQGHQGYGENDMVGNATDFIMRICNVKTLYLSSNT 299

Query: 616 LGVLNHASDYCFPTFHNLTVLELLFDTSSCWTLLPYILARSPKLQSLVFPNGLV--GMSS 443
           L VL ++ D   P F+NLT L +  +    W  LP +L  SP L++L+F  GL+      
Sbjct: 300 LQVLTYSCD-AIPIFNNLTHLTIESNPEVGWQSLPGLLKNSPNLETLIF-QGLIHKATDK 357

Query: 442 YGSSFLWSPSELV-------PERLFSHLKTIEIREFLGKDEELLLIKYFLEYGRSLRRIS 284
            G   L  P E +       P ++   LK  EI + + K  E   IKYFLE   +L ++ 
Sbjct: 358 CGDVCLCKPREEIRSCLASSPVKVIKILKFGEISDDMEKQRE--QIKYFLETMPNLEKMI 415

Query: 283 I--DCSHVPKYAKIQKELLKL--RKGSKTCKLDLILSN 182
           +  + + V    ++   L +L  +  S TC + LI  N
Sbjct: 416 LYYNTTSVEDVTEVSSRLQRLVSKLASSTCIVQLISDN 453


>ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|222859972|gb|EEE97519.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 19/275 (6%)
 Frame = -1

Query: 967 LEDLVIESCKWISGCCLSICGSMLKNLTLDSPISLVHVEKVEP---KIFIDTPALQTLKI 797
           LE+L IE     S   L IC S LK L +  P   V  ++ +P   ++ +DTP L+ LK+
Sbjct: 192 LEELKIEHEDCESRNVLRICSSSLKRLIIRFPF--VAYDEKDPGCRELTLDTPNLELLKL 249

Query: 796 GEFISEDISIKEQLLFLTTASIDVALRLERSMQSRAYGDIVFGLLNKIYH-VKYLTLSEN 620
            + +SE +++ +    L  A++ VA +   ++Q   Y D+   LL  I   VK L L + 
Sbjct: 250 TDLVSEKLNMLQIPYSLVEAALSVAYKHVFTIQVDDYIDMAVQLLRPIMTIVKILRLCDT 309

Query: 619 TL--GVLNHASDYC---------FPTFHNLTVLELLFDTSSCWTLLPYILARSPKLQSLV 473
           T+    L   SD            P F NLT LE+    +  W +L  IL  SPKL+  V
Sbjct: 310 TMRTSPLQTLSDAVHKKLPCVGNLPDFQNLTRLEIEASGNDRWLVLHEILKCSPKLE--V 367

Query: 472 FPNGLVGMSSYGSSFLWSPSELVPERLFSHLKTIEIREFLGKDEELLLIKYFLEYGRSLR 293
           F   ++   S   +  W   E VP  L S LK IE   F  +  E+ + +Y ++    L 
Sbjct: 368 F---ILYKDSTEKTPRWRNPEFVPRCLRSSLKVIEYVGFESELGEIEMAEYLIKNALVLE 424

Query: 292 RISIDCS----HVPKYAKIQKELLKLRKGSKTCKL 200
           +++I+      H  K  ++ + L + R+GS  C++
Sbjct: 425 KMTIEYGWKMIHDFK-ERVAERLTECRRGSTACRI 458


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