BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019355
         (1362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativu...   508   e-148
ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]     500   e-147
ref|XP_002517109.1| conserved hypothetical protein [Ricinus comm...   491   e-142
ref|XP_002883372.1| predicted protein [Arabidopsis lyrata subsp....   476   e-138
ref|NP_188898.1| RNA pol II accessory factor CDC73-like protein ...   476   e-137

>ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativus]
            gi|449513423|ref|XP_004164322.1| PREDICTED:
            parafibromin-like [Cucumis sativus]
          Length = 407

 Score =  508 bits (1309), Expect(2) = e-148
 Identities = 262/370 (70%), Positives = 304/370 (82%), Gaps = 12/370 (3%)
 Frame = -3

Query: 1138 TAYRSKQGNLYTLETLVYFVTNLNSKHHDYIRIAGTHKIPAVTFLDRKPLIDYLHSRIDS 959
            TAYRSKQGNLYTLETLVY++ N + KH +Y++ A T  I +VTF DRKPL+DYL  ++ S
Sbjct: 40   TAYRSKQGNLYTLETLVYYIKNHHVKHTEYLQNARTQGITSVTFPDRKPLLDYLTGKVSS 99

Query: 958  TDAIEFVAPQS--VGKYSGFDEYRPEEANL-GVMMESDIDLNLEGFGGKIVEDGVMLVRE 788
            +DAIEF+ PQ+         DEYRPE+  + G  M++ +D + +GF      D + ++R 
Sbjct: 100  SDAIEFLVPQNPKFPDLPSVDEYRPEDPVIVGAAMDA-VDED-DGFKDSTNVDYMTMIRA 157

Query: 787  IERPFKDRESLLQCRNRDFYSVLVAATKRNEERERSEMQQRKDGLVAKSRIERR------ 626
            IERP KDRESLL+C+NR+FY+VLV +TKR EER+R E QQRKDGLVAKSR+         
Sbjct: 158  IERPLKDRESLLECKNRNFYNVLVMSTKREEERQRLESQQRKDGLVAKSRLMGSDDRGLV 217

Query: 625  -YGEEVGFDATPKAKMHLKGSKIGEGVPIILVPSASQTLITIYNVKEFLEDGVYIPTDVK 449
             YG+++G+DA PK KMHLKG KIGEGVPIILVPSA QTLITIYNVKEFLEDGV+IPTDVK
Sbjct: 218  GYGDDLGYDANPKPKMHLKGGKIGEGVPIILVPSAFQTLITIYNVKEFLEDGVFIPTDVK 277

Query: 448  VKQMKGPKPDCVTVQKKFSRDR--VVTAYEVRDKPSALKAEDWDRVVAVFVLGKEWQFKD 275
            VKQMKG +PDCVTVQKKFSRDR  VVTAYEVRDKPSALK+EDWDRVVAVFVLGKEWQFKD
Sbjct: 278  VKQMKGARPDCVTVQKKFSRDRDRVVTAYEVRDKPSALKSEDWDRVVAVFVLGKEWQFKD 337

Query: 274  WPFKDHVEIFNNILGFYIRFEDDSVESAKTAKQWNVKIISISKNKRHQDRAAALDVWDRL 95
            WPFKDHVEIFN I+GFY+RFEDDS+ESAK  KQWNVKIISISKNKRHQDRAAAL+VWDRL
Sbjct: 338  WPFKDHVEIFNKIIGFYMRFEDDSLESAKNVKQWNVKIISISKNKRHQDRAAALEVWDRL 397

Query: 94   EEFMRSRSRS 65
            EEF+RSRS S
Sbjct: 398  EEFVRSRSHS 407



 Score = 43.9 bits (102), Expect(2) = e-148
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = -1

Query: 1311 MDPLSVLRDFTTRDELSQIVRVGDHYRF 1228
            MDPLS LRDFT R EL +IVRV D +RF
Sbjct: 1    MDPLSALRDFTIRGELDKIVRVNDEFRF 28


>ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]
          Length = 413

 Score =  500 bits (1287), Expect(2) = e-147
 Identities = 262/375 (69%), Positives = 298/375 (79%), Gaps = 17/375 (4%)
 Frame = -3

Query: 1138 TAYRSKQGNLYTLETLVYFVTNLNSKHHDYIRIAGTHKIPAVTFLDRKPLIDYLHSRIDS 959
            TAYRSKQGNLYTLETLVY+V N + KH +Y++ A T +IPAVT  DRKPL++YL  ++ S
Sbjct: 40   TAYRSKQGNLYTLETLVYYVKNHHIKHTEYLQSARTQRIPAVTLPDRKPLLEYLQGKVAS 99

Query: 958  TDAIEFVAPQS-----VGKYSGFDEYRPEEANLGVMME---SDIDLNLEGFGGKIVEDGV 803
            TDAIEFV PQ+     +G     DEYRPE+  L  + +   S+  L+     G    D +
Sbjct: 100  TDAIEFVVPQNPKIPDIG-VDAVDEYRPEDPTLLAIRDPPGSEDALDNSRVRGFDNVDYI 158

Query: 802  MLVREIERPFKDRESLLQCRNRDFYSVLVAATKRNEERERSEMQQRKDGLVAKSRI---- 635
             ++R  ERP KDRESLL+C+ RDFYSVL+A+T+R EER R E  QRKDGLVAKSR+    
Sbjct: 159  SMIRASERPLKDRESLLECKQRDFYSVLMASTRREEERHRLESHQRKDGLVAKSRLMGAD 218

Query: 634  ER-----RYGEEVGFDATPKAKMHLKGSKIGEGVPIILVPSASQTLITIYNVKEFLEDGV 470
            ER     + G+E+G+D TPK KM L  SKIGEGVPIILVPSA QTLITIYNVKEFLEDGV
Sbjct: 219  ERGLGFWKDGDELGYDGTPKPKMLLNRSKIGEGVPIILVPSAFQTLITIYNVKEFLEDGV 278

Query: 469  YIPTDVKVKQMKGPKPDCVTVQKKFSRDRVVTAYEVRDKPSALKAEDWDRVVAVFVLGKE 290
            +IPTDVK KQMKG KPDCVTVQKKFSRDRVV AYEVRDKPSALK EDWDRVVAVFVLGKE
Sbjct: 279  FIPTDVKAKQMKGAKPDCVTVQKKFSRDRVVMAYEVRDKPSALKTEDWDRVVAVFVLGKE 338

Query: 289  WQFKDWPFKDHVEIFNNILGFYIRFEDDSVESAKTAKQWNVKIISISKNKRHQDRAAALD 110
            WQFKDWPFKDHVEIFN I+GFY+RFEDDSVESAK  KQWNVKIISISKNKRHQDRAAAL+
Sbjct: 339  WQFKDWPFKDHVEIFNKIIGFYMRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAAALE 398

Query: 109  VWDRLEEFMRSRSRS 65
            VWDRLEEF+RSRS +
Sbjct: 399  VWDRLEEFVRSRSHT 413



 Score = 48.9 bits (115), Expect(2) = e-147
 Identities = 22/29 (75%), Positives = 24/29 (82%)
 Frame = -1

Query: 1311 MDPLSVLRDFTTRDELSQIVRVGDHYRFG 1225
            MDPLS LRDFT R EL +IVRVGD +RFG
Sbjct: 1    MDPLSALRDFTVRGELDKIVRVGDEFRFG 29


>ref|XP_002517109.1| conserved hypothetical protein [Ricinus communis]
            gi|223543744|gb|EEF45272.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 409

 Score =  491 bits (1263), Expect(2) = e-142
 Identities = 256/370 (69%), Positives = 296/370 (80%), Gaps = 12/370 (3%)
 Frame = -3

Query: 1138 TAYRSKQGNLYTLETLVYFVTNLNSKHHDYIRIAGTHKIPAVTFLDRKPLIDYLHSRIDS 959
            TAYRSKQGNLYTLETLVY++ N + K  DY++ A    +PA+TF+DRKPL DYL  ++ S
Sbjct: 40   TAYRSKQGNLYTLETLVYYIQNSHLKFTDYLQHARAAGLPAITFIDRKPLYDYLTGKVSS 99

Query: 958  TDAIEFVAPQSVGKYSGFDEYRPEEANLGVMMES---DIDLNLEGFGGKIVEDGVM-LVR 791
            TD+I F  PQ+       D      A L   + +   D D+   G G  + ED ++ ++ 
Sbjct: 100  TDSIVFPLPQNPNPNLDLDNDLNSNAVLDSTINNNSADADVASGGGGNNVKEDNLISIIY 159

Query: 790  EIERPFKDRESLLQCRNRDFYSVLVAATKRNEERERSEMQQRKDGLVAKSRI----ERRY 623
             +ERP KDRE+LL+C+ +DFYSVLVA+T+R EER+R E QQRKDGLVAKSR+    +R Y
Sbjct: 160  SMERPIKDREALLECKTKDFYSVLVASTRREEERQRIESQQRKDGLVAKSRLMGSEDRGY 219

Query: 622  G-EEVGFDATPKAKM-HLKGSKIGEGVPIILVPSASQTLITIYNVKEFLEDGVYIPTDVK 449
            G +E+G+DA  K KM HLKG K GEGVPIILVPSA QTLITIYNVKEFLEDGVYIPTDVK
Sbjct: 220  GGDEMGYDANSKPKMLHLKGGKFGEGVPIILVPSAFQTLITIYNVKEFLEDGVYIPTDVK 279

Query: 448  VKQMKGPKPDCVTVQKKFS--RDRVVTAYEVRDKPSALKAEDWDRVVAVFVLGKEWQFKD 275
            VKQMKG KPDCVTVQKKFS  R+RV+TAYEVRDKPSALKAEDWDRVVAVFVLGKEWQFKD
Sbjct: 280  VKQMKGAKPDCVTVQKKFSTDRNRVMTAYEVRDKPSALKAEDWDRVVAVFVLGKEWQFKD 339

Query: 274  WPFKDHVEIFNNILGFYIRFEDDSVESAKTAKQWNVKIISISKNKRHQDRAAALDVWDRL 95
            WPFKDHVEIFN I+GF++RFEDDSVESAKT KQWNVKIISISKNKRHQDRAAAL+VWDRL
Sbjct: 340  WPFKDHVEIFNKIIGFFMRFEDDSVESAKTVKQWNVKIISISKNKRHQDRAAALEVWDRL 399

Query: 94   EEFMRSRSRS 65
            EEF+RSRS S
Sbjct: 400  EEFVRSRSHS 409



 Score = 42.0 bits (97), Expect(2) = e-142
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = -1

Query: 1311 MDPLSVLRDFTTRDELSQIVRVGDHYRF 1228
            MDPLS LRDFT R+++ +IVR+ D +RF
Sbjct: 1    MDPLSALRDFTMRNDVDKIVRINDEFRF 28


>ref|XP_002883372.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329212|gb|EFH59631.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score =  476 bits (1226), Expect(2) = e-138
 Identities = 246/376 (65%), Positives = 297/376 (78%), Gaps = 18/376 (4%)
 Frame = -3

Query: 1138 TAYRSKQGNLYTLETLVYFVTNLNSKHHDYIRIAGTHKIPAVTFLDRKPLIDYLHSRIDS 959
            TAYRSK G+LYTLE LV++V N + KH +Y++    + +PAVT  DRKPL+DYL  R+ S
Sbjct: 40   TAYRSKSGSLYTLEALVHYVKNQHLKHGEYMQSTVKNSVPAVTLPDRKPLLDYLTGRVAS 99

Query: 958  TDAIEFVAPQSVGKYSGF--DEYRPEEANLGVMMESDI--DLNLEGFG--GKIVEDGVML 797
            +D+I+++  Q     S    +EYRP++ N   +   +   D+ +E FG  G+ V D +ML
Sbjct: 100  SDSIDYLLLQQQNAQSQKQNEEYRPDQDNSAFVSRENAIEDMEVEDFGKSGEDV-DYIML 158

Query: 796  VREIERPFKDRESLLQCRNRDFYSVLVAATKRNEERERSEMQQRKDGLVAKSRI----ER 629
            +R  ERP K R+++LQC+NRDFYSVLV +TKR EER+R E  QRKDGLVAKSR+    ER
Sbjct: 159  IRSNERPLKSRDAILQCKNRDFYSVLVNSTKREEERQRIESHQRKDGLVAKSRLMGAEER 218

Query: 628  RY------GEEVGFDATPKAKMHLKGSKIGEGVPIILVPSASQTLITIYNVKEFLEDGVY 467
                    G++ G+DA PK+K+H +  KIGEGVPIILVPSASQTLITIYNVKEFLEDGVY
Sbjct: 219  GIVGFSGGGDDNGYDANPKSKLHFRAGKIGEGVPIILVPSASQTLITIYNVKEFLEDGVY 278

Query: 466  IPTDVKVKQMKGPKPDCVTVQKKFSRDR--VVTAYEVRDKPSALKAEDWDRVVAVFVLGK 293
            IP DVK K+MKG KPDC+TVQKKFSRDR  VVTAYEVRDKPSALK +DWDRVVAVFVLGK
Sbjct: 279  IPNDVKAKEMKGLKPDCITVQKKFSRDRERVVTAYEVRDKPSALKPDDWDRVVAVFVLGK 338

Query: 292  EWQFKDWPFKDHVEIFNNILGFYIRFEDDSVESAKTAKQWNVKIISISKNKRHQDRAAAL 113
            +WQFKDWPFKDHVEIFN I+GF++RFEDDS+ESAKT KQWNVKIISISKNKRHQDRAAAL
Sbjct: 339  DWQFKDWPFKDHVEIFNKIIGFFLRFEDDSIESAKTVKQWNVKIISISKNKRHQDRAAAL 398

Query: 112  DVWDRLEEFMRSRSRS 65
            +VW++LEEF+RSRS S
Sbjct: 399  EVWEKLEEFVRSRSHS 414



 Score = 42.7 bits (99), Expect(2) = e-138
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = -1

Query: 1311 MDPLSVLRDFTTRDELSQIVRVGDHYRFG 1225
            MDPLSVL+DFT R ++ +I RVG +YRFG
Sbjct: 1    MDPLSVLKDFTIRGDVDKIERVGVNYRFG 29


>ref|NP_188898.1| RNA pol II accessory factor CDC73-like protein [Arabidopsis thaliana]
            gi|11994291|dbj|BAB01474.1| unnamed protein product
            [Arabidopsis thaliana] gi|17529302|gb|AAL38878.1| unknown
            protein [Arabidopsis thaliana] gi|23296828|gb|AAN13180.1|
            unknown protein [Arabidopsis thaliana]
            gi|332643135|gb|AEE76656.1| RNA pol II accessory factor
            CDC73-like protein [Arabidopsis thaliana]
          Length = 415

 Score =  476 bits (1224), Expect(2) = e-137
 Identities = 247/377 (65%), Positives = 295/377 (78%), Gaps = 19/377 (5%)
 Frame = -3

Query: 1138 TAYRSKQGNLYTLETLVYFVTNLNSKHHDYIRIAGTHKIPAVTFLDRKPLIDYLHSRIDS 959
            TAYRSK G+LYTLE LV++V N   KH +Y++    + +PAVT  DRKPL+DYL  R+ S
Sbjct: 40   TAYRSKSGSLYTLEALVHYVKNQQLKHGEYMQSTVKNSVPAVTLPDRKPLLDYLTGRVAS 99

Query: 958  TDAIEFVAPQSVGKYSGF--DEYRPEEANLGVMMESDI--DLNLEGFG--GKIVEDGVML 797
            +D+I+F+  Q     S    +EYRP++ N   +   +   D+ +E FG  G+ V D +ML
Sbjct: 100  SDSIDFLLLQQQNAQSQKQNEEYRPDQDNSAFVSRENAIADMEVEDFGKSGEDV-DYIML 158

Query: 796  VREIERPFKDRESLLQCRNRDFYSVLVAATKRNEERERSEMQQRKDGLVAKSRI----ER 629
            +R  ERP K R+++LQC+NRDFYSVLV +TKR EER+R E  QRKDGLVAKSR+    ER
Sbjct: 159  IRSNERPLKSRDAILQCKNRDFYSVLVNSTKREEERQRIESHQRKDGLVAKSRLMGAEER 218

Query: 628  RY-------GEEVGFDATPKAKMHLKGSKIGEGVPIILVPSASQTLITIYNVKEFLEDGV 470
                     G++ G+DA PK+K+H K  KIGEGVPIILVPSA QTLITIYNVKEFLEDGV
Sbjct: 219  GIVGFSSGGGDDNGYDANPKSKLHFKAGKIGEGVPIILVPSAFQTLITIYNVKEFLEDGV 278

Query: 469  YIPTDVKVKQMKGPKPDCVTVQKKFSRDR--VVTAYEVRDKPSALKAEDWDRVVAVFVLG 296
            YIP DVK K+MKG KPDC+TVQKKFSRDR  VVTAYEVRDKPSALK +DWDRVVAVFVLG
Sbjct: 279  YIPNDVKAKEMKGLKPDCITVQKKFSRDRERVVTAYEVRDKPSALKPDDWDRVVAVFVLG 338

Query: 295  KEWQFKDWPFKDHVEIFNNILGFYIRFEDDSVESAKTAKQWNVKIISISKNKRHQDRAAA 116
            K+WQFKDWPFKDHVEIFN I+GF++RFEDDS+ESAKT KQWNVKIISISKNKRHQDRAAA
Sbjct: 339  KDWQFKDWPFKDHVEIFNKIIGFFLRFEDDSIESAKTVKQWNVKIISISKNKRHQDRAAA 398

Query: 115  LDVWDRLEEFMRSRSRS 65
            L+VW++LEEF+RSRS S
Sbjct: 399  LEVWEKLEEFVRSRSHS 415



 Score = 42.0 bits (97), Expect(2) = e-137
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = -1

Query: 1311 MDPLSVLRDFTTRDELSQIVRVGDHYRFG 1225
            MDPLSVL++FT R ++ +I RVG +YRFG
Sbjct: 1    MDPLSVLKEFTIRGDIDKIERVGANYRFG 29