BLASTX nr result
ID: Cnidium21_contig00019335
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00019335 (628 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAB88648.1| microtubule bundling polypeptide TMBP200 [Nicoti... 60 1e-13 ref|XP_002534264.1| microtubule associated protein xmap215, puta... 61 1e-07 ref|XP_004134886.1| PREDICTED: protein MOR1-like [Cucumis sativus] 53 4e-07 ref|XP_004172540.1| PREDICTED: protein MOR1-like, partial [Cucum... 53 5e-07 ref|XP_002300496.1| microtubule organization protein [Populus tr... 58 2e-06 >dbj|BAB88648.1| microtubule bundling polypeptide TMBP200 [Nicotiana tabacum] Length = 2029 Score = 59.7 bits (143), Expect(3) = 1e-13 Identities = 29/59 (49%), Positives = 40/59 (67%) Frame = +3 Query: 246 CTTDAFLSAMGSAVEKASKVPYFDAALMDAKIGAEGRSDIFECLSRELAGVKDFTDAIH 422 CT + L + +AV VPY AL DAK+GAEGR D+F+ LS++L G+K+F DA+H Sbjct: 956 CTLNT-LDSWLAAVHLDKMVPYITGALTDAKLGAEGRKDLFDWLSKQLTGMKEFPDAVH 1013 Score = 40.4 bits (93), Expect(3) = 1e-13 Identities = 17/23 (73%), Positives = 20/23 (86%) Frame = +2 Query: 545 DKSADVR*AVKVCFGEILKVCGQ 613 DKSADVR A + CFGE+L+VCGQ Sbjct: 1024 DKSADVRKAAEACFGELLRVCGQ 1046 Score = 21.2 bits (43), Expect(3) = 1e-13 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +1 Query: 400 KTLPMQYILLKPVATSMT 453 K P LLKPVA++MT Sbjct: 1006 KEFPDAVHLLKPVASAMT 1023 >ref|XP_002534264.1| microtubule associated protein xmap215, putative [Ricinus communis] gi|223525620|gb|EEF28119.1| microtubule associated protein xmap215, putative [Ricinus communis] Length = 1992 Score = 61.2 bits (147), Expect = 1e-07 Identities = 29/58 (50%), Positives = 42/58 (72%) Frame = +3 Query: 249 TTDAFLSAMGSAVEKASKVPYFDAALMDAKIGAEGRSDIFECLSRELAGVKDFTDAIH 422 T D++L+A V +PY AL+DAK+GAEGR D+F+ LSR+L+G+ DF+DA+H Sbjct: 927 TIDSWLAA----VHLDKMIPYIATALIDAKLGAEGRKDLFDWLSRQLSGLSDFSDAVH 980 >ref|XP_004134886.1| PREDICTED: protein MOR1-like [Cucumis sativus] Length = 2005 Score = 53.1 bits (126), Expect(2) = 4e-07 Identities = 26/59 (44%), Positives = 38/59 (64%) Frame = +3 Query: 264 LSAMGSAVEKASKVPYFDAALMDAKIGAEGRSDIFECLSRELAGVKDFTDAIHPVETSC 440 L A +AV +PY AL+D K+ AEGR D+ E LSR+L+G+ D +DAI ++ +C Sbjct: 946 LDAWLAAVHFDKMIPYMILALVDNKVSAEGRKDLLEWLSRKLSGINDSSDAIQLLKPAC 1004 Score = 26.2 bits (56), Expect(2) = 4e-07 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +2 Query: 545 DKSADVR*AVKVCFGEILKV 604 DKS+DVR A + C EIL+V Sbjct: 1009 DKSSDVRKAAESCITEILRV 1028 >ref|XP_004172540.1| PREDICTED: protein MOR1-like, partial [Cucumis sativus] Length = 781 Score = 53.1 bits (126), Expect(2) = 5e-07 Identities = 26/59 (44%), Positives = 38/59 (64%) Frame = +3 Query: 264 LSAMGSAVEKASKVPYFDAALMDAKIGAEGRSDIFECLSRELAGVKDFTDAIHPVETSC 440 L A +AV +PY AL+D K+ AEGR D+ E LSR+L+G+ D +DAI ++ +C Sbjct: 491 LDAWLAAVHFDKMIPYMILALVDNKVSAEGRKDLLEWLSRKLSGINDSSDAIQLLKPAC 549 Score = 26.2 bits (56), Expect(2) = 5e-07 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +2 Query: 545 DKSADVR*AVKVCFGEILKV 604 DKS+DVR A + C EIL+V Sbjct: 554 DKSSDVRKAAESCITEILRV 573 >ref|XP_002300496.1| microtubule organization protein [Populus trichocarpa] gi|222847754|gb|EEE85301.1| microtubule organization protein [Populus trichocarpa] Length = 2036 Score = 57.8 bits (138), Expect = 2e-06 Identities = 28/59 (47%), Positives = 41/59 (69%) Frame = +3 Query: 246 CTTDAFLSAMGSAVEKASKVPYFDAALMDAKIGAEGRSDIFECLSRELAGVKDFTDAIH 422 CT + L + +AV VPY AAL++ K+GAEGR D+F+ LS++L+G +F+DAIH Sbjct: 963 CTLNT-LDSWVAAVHLDKMVPYITAALIETKLGAEGRKDLFDWLSKQLSGSSEFSDAIH 1020