BLASTX nr result

ID: Cnidium21_contig00019335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019335
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB88648.1| microtubule bundling polypeptide TMBP200 [Nicoti...    60   1e-13
ref|XP_002534264.1| microtubule associated protein xmap215, puta...    61   1e-07
ref|XP_004134886.1| PREDICTED: protein MOR1-like [Cucumis sativus]     53   4e-07
ref|XP_004172540.1| PREDICTED: protein MOR1-like, partial [Cucum...    53   5e-07
ref|XP_002300496.1| microtubule organization protein [Populus tr...    58   2e-06

>dbj|BAB88648.1| microtubule bundling polypeptide TMBP200 [Nicotiana tabacum]
          Length = 2029

 Score = 59.7 bits (143), Expect(3) = 1e-13
 Identities = 29/59 (49%), Positives = 40/59 (67%)
 Frame = +3

Query: 246  CTTDAFLSAMGSAVEKASKVPYFDAALMDAKIGAEGRSDIFECLSRELAGVKDFTDAIH 422
            CT +  L +  +AV     VPY   AL DAK+GAEGR D+F+ LS++L G+K+F DA+H
Sbjct: 956  CTLNT-LDSWLAAVHLDKMVPYITGALTDAKLGAEGRKDLFDWLSKQLTGMKEFPDAVH 1013



 Score = 40.4 bits (93), Expect(3) = 1e-13
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +2

Query: 545  DKSADVR*AVKVCFGEILKVCGQ 613
            DKSADVR A + CFGE+L+VCGQ
Sbjct: 1024 DKSADVRKAAEACFGELLRVCGQ 1046



 Score = 21.2 bits (43), Expect(3) = 1e-13
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 400  KTLPMQYILLKPVATSMT 453
            K  P    LLKPVA++MT
Sbjct: 1006 KEFPDAVHLLKPVASAMT 1023


>ref|XP_002534264.1| microtubule associated protein xmap215, putative [Ricinus communis]
            gi|223525620|gb|EEF28119.1| microtubule associated
            protein xmap215, putative [Ricinus communis]
          Length = 1992

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 29/58 (50%), Positives = 42/58 (72%)
 Frame = +3

Query: 249  TTDAFLSAMGSAVEKASKVPYFDAALMDAKIGAEGRSDIFECLSRELAGVKDFTDAIH 422
            T D++L+A    V     +PY   AL+DAK+GAEGR D+F+ LSR+L+G+ DF+DA+H
Sbjct: 927  TIDSWLAA----VHLDKMIPYIATALIDAKLGAEGRKDLFDWLSRQLSGLSDFSDAVH 980


>ref|XP_004134886.1| PREDICTED: protein MOR1-like [Cucumis sativus]
          Length = 2005

 Score = 53.1 bits (126), Expect(2) = 4e-07
 Identities = 26/59 (44%), Positives = 38/59 (64%)
 Frame = +3

Query: 264  LSAMGSAVEKASKVPYFDAALMDAKIGAEGRSDIFECLSRELAGVKDFTDAIHPVETSC 440
            L A  +AV     +PY   AL+D K+ AEGR D+ E LSR+L+G+ D +DAI  ++ +C
Sbjct: 946  LDAWLAAVHFDKMIPYMILALVDNKVSAEGRKDLLEWLSRKLSGINDSSDAIQLLKPAC 1004



 Score = 26.2 bits (56), Expect(2) = 4e-07
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +2

Query: 545  DKSADVR*AVKVCFGEILKV 604
            DKS+DVR A + C  EIL+V
Sbjct: 1009 DKSSDVRKAAESCITEILRV 1028


>ref|XP_004172540.1| PREDICTED: protein MOR1-like, partial [Cucumis sativus]
          Length = 781

 Score = 53.1 bits (126), Expect(2) = 5e-07
 Identities = 26/59 (44%), Positives = 38/59 (64%)
 Frame = +3

Query: 264 LSAMGSAVEKASKVPYFDAALMDAKIGAEGRSDIFECLSRELAGVKDFTDAIHPVETSC 440
           L A  +AV     +PY   AL+D K+ AEGR D+ E LSR+L+G+ D +DAI  ++ +C
Sbjct: 491 LDAWLAAVHFDKMIPYMILALVDNKVSAEGRKDLLEWLSRKLSGINDSSDAIQLLKPAC 549



 Score = 26.2 bits (56), Expect(2) = 5e-07
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +2

Query: 545 DKSADVR*AVKVCFGEILKV 604
           DKS+DVR A + C  EIL+V
Sbjct: 554 DKSSDVRKAAESCITEILRV 573


>ref|XP_002300496.1| microtubule organization protein [Populus trichocarpa]
            gi|222847754|gb|EEE85301.1| microtubule organization
            protein [Populus trichocarpa]
          Length = 2036

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/59 (47%), Positives = 41/59 (69%)
 Frame = +3

Query: 246  CTTDAFLSAMGSAVEKASKVPYFDAALMDAKIGAEGRSDIFECLSRELAGVKDFTDAIH 422
            CT +  L +  +AV     VPY  AAL++ K+GAEGR D+F+ LS++L+G  +F+DAIH
Sbjct: 963  CTLNT-LDSWVAAVHLDKMVPYITAALIETKLGAEGRKDLFDWLSKQLSGSSEFSDAIH 1020


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