BLASTX nr result

ID: Cnidium21_contig00019333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019333
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi...   209   2e-52
ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi...   195   4e-48
ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi...   191   4e-47
ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containi...   184   7e-45
ref|XP_003576863.1| PREDICTED: pentatricopeptide repeat-containi...   167   6e-40

>ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 590

 Score =  209 bits (531), Expect = 2e-52
 Identities = 101/146 (69%), Positives = 121/146 (82%)
 Frame = -2

Query: 448 MEHYTCLIGVLGRVGRIADAERIALTMPYEADAAVWRTLLSSCAHHGEADMALVMSKRLL 269
           +EHYTCL+G +GR G++ DAERIA+TMP+E DAAVWR LLSSCA HG ADMA  M +RL+
Sbjct: 350 LEHYTCLVGTMGRAGQLEDAERIAMTMPFEPDAAVWRALLSSCAMHGAADMAWAMGRRLM 409

Query: 268 ELNLYDDSAYVIVANVLASAGRLDEVREVRKLMKQRRVSKEGGKSWIELPGEVHVFMAGD 89
           EL+  DDSAYVIVANVLA+ GR DEV EVRK+MK R V KEGG+SWIE+ G+VHVF+AGD
Sbjct: 410 ELDPQDDSAYVIVANVLATNGRWDEVAEVRKMMKDRMVKKEGGRSWIEVRGKVHVFLAGD 469

Query: 88  KTHGMSKEIYAKLVELREEILKLGYE 11
           + H  S EIYAKLVEL E+I +LGY+
Sbjct: 470 RRHERSHEIYAKLVELMEKIEELGYK 495


>ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  195 bits (495), Expect = 4e-48
 Identities = 95/146 (65%), Positives = 114/146 (78%)
 Frame = -2

Query: 448 MEHYTCLIGVLGRVGRIADAERIALTMPYEADAAVWRTLLSSCAHHGEADMALVMSKRLL 269
           +EHYTCL+G + R G +  AER+ LTMP+E DAAVWR LLS CA+ GEAD A  M+KR+L
Sbjct: 337 LEHYTCLVGAMARAGELERAERVVLTMPFEPDAAVWRALLSVCAYRGEADKAWCMAKRVL 396

Query: 268 ELNLYDDSAYVIVANVLASAGRLDEVREVRKLMKQRRVSKEGGKSWIELPGEVHVFMAGD 89
           EL  +DD AYV VANVL+SAGR D+V E+RK+MK RRV K+GG+SWIE+ GEVHVF+AGD
Sbjct: 397 ELEPHDDYAYVSVANVLSSAGRWDDVAELRKMMKDRRVKKKGGRSWIEVQGEVHVFVAGD 456

Query: 88  KTHGMSKEIYAKLVELREEILKLGYE 11
             H  SKEIY KL EL  +I KLGYE
Sbjct: 457 WKHERSKEIYQKLAELMGDIEKLGYE 482


>ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  191 bits (486), Expect = 4e-47
 Identities = 95/146 (65%), Positives = 112/146 (76%)
 Frame = -2

Query: 448 MEHYTCLIGVLGRVGRIADAERIALTMPYEADAAVWRTLLSSCAHHGEADMALVMSKRLL 269
           +EHYTCL+G + R G +  AER+ LTMP E DAAVWR LLS CA+ GEAD A  M+KR+L
Sbjct: 337 LEHYTCLVGAMARAGELERAERVVLTMPIEPDAAVWRALLSVCAYRGEADKAWSMAKRVL 396

Query: 268 ELNLYDDSAYVIVANVLASAGRLDEVREVRKLMKQRRVSKEGGKSWIELPGEVHVFMAGD 89
           EL   DD AYV VANVL+SAGR D+V E+RK+MK RRV K+GG+SWIE+ GEVHVF+AGD
Sbjct: 397 ELEPNDDYAYVSVANVLSSAGRWDDVAELRKMMKDRRVKKKGGRSWIEVQGEVHVFVAGD 456

Query: 88  KTHGMSKEIYAKLVELREEILKLGYE 11
             H  SKEIY KL EL  +I KLGYE
Sbjct: 457 WKHERSKEIYQKLAELMGDIEKLGYE 482


>ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
           gi|449487598|ref|XP_004157706.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 583

 Score =  184 bits (467), Expect = 7e-45
 Identities = 92/148 (62%), Positives = 112/148 (75%)
 Frame = -2

Query: 448 MEHYTCLIGVLGRVGRIADAERIALTMPYEADAAVWRTLLSSCAHHGEADMALVMSKRLL 269
           +EH+TCLI  LGR G++ +AER+A+TMP+  D AVWR LLSS A HG  DMA  M+KRLL
Sbjct: 346 LEHFTCLIDALGRTGKLEEAERVAMTMPFVPDEAVWRALLSSSASHGAGDMAWTMAKRLL 405

Query: 268 ELNLYDDSAYVIVANVLASAGRLDEVREVRKLMKQRRVSKEGGKSWIELPGEVHVFMAGD 89
           ELN +DDSAYVIV+N L+ A R +EV  VRKLMK+R V K  GKSWIE+ GE HVF+AGD
Sbjct: 406 ELNQHDDSAYVIVSNALSVAARWEEVALVRKLMKERHVKKISGKSWIEVRGEAHVFLAGD 465

Query: 88  KTHGMSKEIYAKLVELREEILKLGYEPV 5
           + H  ++E+ AKL EL  EI KLGY PV
Sbjct: 466 RNHERAEEMNAKLKELVGEIEKLGYVPV 493


>ref|XP_003576863.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Brachypodium distachyon]
          Length = 574

 Score =  167 bits (424), Expect = 6e-40
 Identities = 82/148 (55%), Positives = 108/148 (72%)
 Frame = -2

Query: 448 MEHYTCLIGVLGRVGRIADAERIALTMPYEADAAVWRTLLSSCAHHGEADMALVMSKRLL 269
           + HYTC++G + RVGR+ DA+ I  TMP + DAAVWRTLL+ C  H +ADMA VM +RLL
Sbjct: 349 LAHYTCVVGAMARVGRLEDADSIVCTMPCKPDAAVWRTLLAGCVVHHKADMAGVMGQRLL 408

Query: 268 ELNLYDDSAYVIVANVLASAGRLDEVREVRKLMKQRRVSKEGGKSWIELPGEVHVFMAGD 89
           E++  DDSAYV++ANV ++AGR D+V E    M+   V KEGG+SWIE+ G+VHVF+A D
Sbjct: 409 EIDPKDDSAYVMLANVYSAAGRSDDVAEAWTAMRDHGVRKEGGRSWIEVRGQVHVFVAND 468

Query: 88  KTHGMSKEIYAKLVELREEILKLGYEPV 5
           K H    +IY KL EL +E+ KLGY+ V
Sbjct: 469 KRHEQLLDIYEKLDELIKEVEKLGYKEV 496


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