BLASTX nr result

ID: Cnidium21_contig00019326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019326
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|2235393...   213   2e-53
ref|XP_002273877.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   203   2e-50
ref|XP_002324584.1| predicted protein [Populus trichocarpa] gi|2...   201   9e-50
emb|CAN61088.1| hypothetical protein VITISV_033584 [Vitis vinifera]   197   2e-48
ref|XP_004135565.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra...   193   2e-47

>ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|223539341|gb|EEF40932.1| tRNA,
           putative [Ricinus communis]
          Length = 311

 Score =  213 bits (543), Expect = 2e-53
 Identities = 103/145 (71%), Positives = 116/145 (80%)
 Frame = +3

Query: 3   RDIQGEGFPNEFTGKADSVFLDLPQPWLAIPSVGKMLKQDGILCSFSPCIEQVQRSCETL 182
           RDIQGEGFP+E++G  DSVFLDLPQPWLAIPS  KMLKQDG+LCSFSPCIEQVQRSCETL
Sbjct: 167 RDIQGEGFPDEYSGLVDSVFLDLPQPWLAIPSAAKMLKQDGVLCSFSPCIEQVQRSCETL 226

Query: 183 TTNFTDIRTFEVLLRTYEVREVKMNSFQGDVDCSIEFPPCKRRHRXXXXXXXXXXXXPPV 362
            +NFTDIRTFEVLLRTYEVREVKM+  QG+   S+  PP KRR R             PV
Sbjct: 227 RSNFTDIRTFEVLLRTYEVREVKMDCGQGEEGISLGSPPYKRRQRSSEGSNVQNSSSSPV 286

Query: 363 VMARPSSEARGHTGYLTFARLKCVA 437
           +MARP  ++RGHTGYLTFARLKC++
Sbjct: 287 IMARPCGDSRGHTGYLTFARLKCLS 311


>ref|XP_002273877.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase catalytic subunit
           TRMT61A [Vitis vinifera]
          Length = 324

 Score =  203 bits (516), Expect = 2e-50
 Identities = 102/145 (70%), Positives = 115/145 (79%)
 Frame = +3

Query: 3   RDIQGEGFPNEFTGKADSVFLDLPQPWLAIPSVGKMLKQDGILCSFSPCIEQVQRSCETL 182
           RDIQGEGFP+EF+G ADSVFLDLPQPWLAIPS GKMLK+DG+LCSFSPCIEQVQRS ETL
Sbjct: 167 RDIQGEGFPDEFSGLADSVFLDLPQPWLAIPSAGKMLKEDGVLCSFSPCIEQVQRSSETL 226

Query: 183 TTNFTDIRTFEVLLRTYEVREVKMNSFQGDVDCSIEFPPCKRRHRXXXXXXXXXXXXPPV 362
           T+NFTDIRTFEVLLRTYEVRE KM+  QG+    +   P KRR R               
Sbjct: 227 TSNFTDIRTFEVLLRTYEVREGKMDCSQGNEGGFLGPRPGKRRQRSGEASNEGEIPTSTT 286

Query: 363 VMARPSSEARGHTGYLTFARLKCVA 437
           VMARP++EARGHTG+LTFARLKC++
Sbjct: 287 VMARPAAEARGHTGFLTFARLKCLS 311


>ref|XP_002324584.1| predicted protein [Populus trichocarpa] gi|222866018|gb|EEF03149.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  201 bits (511), Expect = 9e-50
 Identities = 98/145 (67%), Positives = 112/145 (77%)
 Frame = +3

Query: 3   RDIQGEGFPNEFTGKADSVFLDLPQPWLAIPSVGKMLKQDGILCSFSPCIEQVQRSCETL 182
           RDIQGEGFP+E++G ADSVFLDLPQPWLAI S GKMLKQDG LCSFSPCIEQVQR+CE L
Sbjct: 167 RDIQGEGFPDEYSGLADSVFLDLPQPWLAILSAGKMLKQDGTLCSFSPCIEQVQRTCEAL 226

Query: 183 TTNFTDIRTFEVLLRTYEVREVKMNSFQGDVDCSIEFPPCKRRHRXXXXXXXXXXXXPPV 362
            +NF DIRTFEVLLRT+EV E KM+S QGD   S+  PP KRR R             P 
Sbjct: 227 KSNFRDIRTFEVLLRTFEVHEGKMDSCQGDEGVSVGSPPYKRRQRSSEGSIVQDSSSSPT 286

Query: 363 VMARPSSEARGHTGYLTFARLKCVA 437
           + ARP ++ARGHTGYLTF+RLKC++
Sbjct: 287 IKARPCADARGHTGYLTFSRLKCLS 311


>emb|CAN61088.1| hypothetical protein VITISV_033584 [Vitis vinifera]
          Length = 777

 Score =  197 bits (500), Expect = 2e-48
 Identities = 100/141 (70%), Positives = 111/141 (78%)
 Frame = +3

Query: 3   RDIQGEGFPNEFTGKADSVFLDLPQPWLAIPSVGKMLKQDGILCSFSPCIEQVQRSCETL 182
           RDIQGEGFP+EF+G ADSVFLDLPQPWLAIPS GKMLK+DG+LCSFSPCIEQVQRS ETL
Sbjct: 234 RDIQGEGFPDEFSGLADSVFLDLPQPWLAIPSAGKMLKEDGVLCSFSPCIEQVQRSSETL 293

Query: 183 TTNFTDIRTFEVLLRTYEVREVKMNSFQGDVDCSIEFPPCKRRHRXXXXXXXXXXXXPPV 362
           T+NFTDIRTFEVLLRTYEVRE KM+  QG+    +   P KRR R               
Sbjct: 294 TSNFTDIRTFEVLLRTYEVREGKMDCSQGNEGGFLGPRPGKRRQRSGEASNEGEIPTSTT 353

Query: 363 VMARPSSEARGHTGYLTFARL 425
           VMARP++EARGHTG+LTFARL
Sbjct: 354 VMARPAAEARGHTGFLTFARL 374


>ref|XP_004135565.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic
           subunit TRMT61A-like [Cucumis sativus]
           gi|449528672|ref|XP_004171327.1| PREDICTED: tRNA
           (adenine(58)-N(1))-methyltransferase catalytic subunit
           TRMT61A-like [Cucumis sativus]
          Length = 310

 Score =  193 bits (491), Expect = 2e-47
 Identities = 99/145 (68%), Positives = 109/145 (75%)
 Frame = +3

Query: 3   RDIQGEGFPNEFTGKADSVFLDLPQPWLAIPSVGKMLKQDGILCSFSPCIEQVQRSCETL 182
           RDIQG+GFP EF G ADSVFLDLPQPWLAIPS  +MLKQDG+LCSFSPCIEQVQRS ETL
Sbjct: 167 RDIQGQGFPEEFVGLADSVFLDLPQPWLAIPSAERMLKQDGMLCSFSPCIEQVQRSVETL 226

Query: 183 TTNFTDIRTFEVLLRTYEVREVKMNSFQGDVDCSIEFPPCKRRHRXXXXXXXXXXXXPPV 362
            + FTDIRTFEVLLRTYEV+E +  S Q D   S+  PPCKRR R               
Sbjct: 227 RSKFTDIRTFEVLLRTYEVKEGRTESNQVDGGGSVGLPPCKRRLR-SKESDDMDNESSTT 285

Query: 363 VMARPSSEARGHTGYLTFARLKCVA 437
           VM RP SEARGHTGYLTFARL+C++
Sbjct: 286 VMVRPCSEARGHTGYLTFARLRCLS 310


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